RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 UXTQ9UBK9 157 aaPredicted RBP18.47■□□□□ 0.55
CLSTN1-202ENST00000377298 FMN2Q9NZ56 1722 aa18.47■□□□□ 0.55
CLSTN1-202ENST00000377298 VPS26AO75436 327 aa18.47■□□□□ 0.55
CLSTN1-202ENST00000377298 MRPS6P82932 125 aaKnown RBP18.47■□□□□ 0.55
CLSTN1-202ENST00000377298 SLC9A9Q8IVB4 645 aa18.47■□□□□ 0.55
CLSTN1-202ENST00000377298 PARP9Q8IXQ6 854 aa18.47■□□□□ 0.55
CLSTN1-202ENST00000377298 RUBCNLQ9H714 662 aa18.47■□□□□ 0.55
CLSTN1-202ENST00000377298 PCDH9Q9HC56 1237 aa18.47■□□□□ 0.55
CLSTN1-202ENST00000377298 TBC1D13Q9NVG8 400 aa18.47■□□□□ 0.55
CLSTN1-202ENST00000377298 SPDYE5A6NIY4 337 aa18.47■□□□□ 0.55
CLSTN1-202ENST00000377298 DDX3XO00571 662 aaKnown RBP eCLIP18.47■□□□□ 0.554e-8■■■■■ 28.9
CLSTN1-202ENST00000377298 ENO1P06733 434 aaKnown RBP18.47■□□□□ 0.55
CLSTN1-202ENST00000377298 VCPP55072 806 aaKnown RBP18.47■□□□□ 0.55
CLSTN1-202ENST00000377298 GLTPD2A6NH11 291 aa18.46■□□□□ 0.55
CLSTN1-202ENST00000377298 LZTS3O60299 673 aaPredicted RBP18.46■□□□□ 0.55
CLSTN1-202ENST00000377298 SLURP2P0DP57 97 aa18.46■□□□□ 0.55
CLSTN1-202ENST00000377298 PAX3P23760 479 aa18.46■□□□□ 0.55
CLSTN1-202ENST00000377298 KLRC2P26717 231 aa18.46■□□□□ 0.55
CLSTN1-202ENST00000377298 ZNF135P52742 658 aaPredicted RBP18.46■□□□□ 0.55
CLSTN1-202ENST00000377298 ANO5Q75V66 913 aa18.46■□□□□ 0.55
CLSTN1-202ENST00000377298 UROC1Q96N76 676 aa18.46■□□□□ 0.55
CLSTN1-202ENST00000377298 KLC4Q9NSK0 619 aa18.46■□□□□ 0.55
CLSTN1-202ENST00000377298 ITGALP20701 1170 aa18.46■□□□□ 0.55
CLSTN1-202ENST00000377298 RRM2BQ7LG56 351 aa18.46■□□□□ 0.55
CLSTN1-202ENST00000377298 MTMR8Q96EF0 704 aa18.46■□□□□ 0.55
CLSTN1-202ENST00000377298 PURBQ96QR8 312 aaKnown RBP18.46■□□□□ 0.55
CLSTN1-202ENST00000377298 MAF1Q9H063 256 aa18.46■□□□□ 0.55
CLSTN1-202ENST00000377298 POU4F1Q01851 419 aa18.46■□□□□ 0.55
CLSTN1-202ENST00000377298 PRAMEF19Q5SWL8 479 aa18.46■□□□□ 0.55
CLSTN1-202ENST00000377298 MARC1Q5VT66 337 aa18.46■□□□□ 0.55
CLSTN1-202ENST00000377298 C3orf20Q8ND61 904 aa18.46■□□□□ 0.55
CLSTN1-202ENST00000377298 OTUB1Q96FW1 271 aaPredicted RBP18.46■□□□□ 0.55
CLSTN1-202ENST00000377298 YIPF2Q9BWQ6 316 aa18.46■□□□□ 0.55
CLSTN1-202ENST00000377298 DCDC2Q9UHG0 476 aa18.46■□□□□ 0.55
CLSTN1-202ENST00000377298 E2F8A0AVK6 867 aa18.46■□□□□ 0.55
CLSTN1-202ENST00000377298 RENBPP51606 427 aa18.46■□□□□ 0.55
CLSTN1-202ENST00000377298 SPDYE7PQ495Y7 208 aa18.46■□□□□ 0.55
CLSTN1-202ENST00000377298 CCDC126Q96EE4 140 aa18.46■□□□□ 0.55
CLSTN1-202ENST00000377298 KIF17Q9P2E2 1029 aa18.46■□□□□ 0.55
CLSTN1-202ENST00000377298 ROBO3Q96MS0 1386 aa18.46■□□□□ 0.55
CLSTN1-202ENST00000377298 PHF20L1A8MW92 1017 aa18.46■□□□□ 0.54
CLSTN1-202ENST00000377298 CBX4O00257 560 aa18.46■□□□□ 0.54
CLSTN1-202ENST00000377298 SNHG28P0DPA3 235 aa18.46■□□□□ 0.54
CLSTN1-202ENST00000377298 SERPINB8P50452 374 aa18.46■□□□□ 0.54
CLSTN1-202ENST00000377298 SETD3Q86TU7 594 aaPredicted RBP18.46■□□□□ 0.54
CLSTN1-202ENST00000377298 BAZ2BQ9UIF8 2168 aaKnown RBP18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 SYNDIG1LA6NDD5 238 aa18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 CES2O00748 559 aa18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 RAMP2O60895 175 aa18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 PTENP60484 403 aa18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 PPP3CAQ08209 521 aa18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 TBX2Q13207 712 aaPredicted RBP18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 FICDQ9BVA6 458 aa18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 NT5MQ9NPB1 228 aa18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 RBM22Q9NW64 420 aaKnown RBP eCLIP18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 ATP9AO75110 1047 aa18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 PGK1P00558 417 aa18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 CNTFP26441 200 aa18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 LSP1P33241 339 aa18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 CASP5P51878 434 aa18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 INPP5AQ14642 412 aa18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 CHI3L2Q15782 390 aa18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 ZNF284Q2VY69 593 aa18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 PKN3Q6P5Z2 889 aa18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 KIAA0319LQ8IZA0 1049 aa18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 DEFB106AQ8N104 65 aa18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 ARMC2Q8NEN0 867 aa18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 CMTM5Q96DZ9 223 aa18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 TISP43B9A030 160 aa18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 LYPLA2O95372 231 aa18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 CKBP12277 381 aa18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 NR2C2P49116 596 aa18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 CAPSQ13938 189 aa18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 MEA1Q16626 185 aa18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 HIST2H2ACQ16777 129 aaPredicted RBP18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 HIST2H2AA3Q6FI13 130 aa18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 COLGALT1Q8NBJ5 622 aa18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 PLA2G4CQ9UP65 541 aa18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 KLRC4O43908 158 aa18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 WASHC5Q12768 1159 aa18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 ARMC6Q6NXE6 501 aa18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 HOMEZQ8IX15 550 aa18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 SCUBE3Q8IX30 993 aa18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 FUT8Q9BYC5 575 aa18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 TSPYL2Q9H2G4 693 aaPredicted RBP18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 ANLNQ9NQW6 1124 aa18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 PCDHA3Q9Y5H8 950 aa18.45■□□□□ 0.54
CLSTN1-202ENST00000377298 PPP3CCP48454 512 aa18.44■□□□□ 0.54
CLSTN1-202ENST00000377298 PPP4R4Q6NUP7 873 aa18.44■□□□□ 0.54
CLSTN1-202ENST00000377298 CCDC33Q8N5R6 958 aa18.44■□□□□ 0.54
CLSTN1-202ENST00000377298 FBXO25Q8TCJ0 367 aa18.44■□□□□ 0.54
CLSTN1-202ENST00000377298 PGLYRP2Q96PD5 576 aa18.44■□□□□ 0.54
CLSTN1-202ENST00000377298 KCNK16Q96T55 309 aa18.44■□□□□ 0.54
CLSTN1-202ENST00000377298 FTHL17Q9BXU8 183 aa18.44■□□□□ 0.54
CLSTN1-202ENST00000377298 KCTD10Q9H3F6 313 aa18.44■□□□□ 0.54
CLSTN1-202ENST00000377298 POPDC2Q9HBU9 364 aa18.44■□□□□ 0.54
CLSTN1-202ENST00000377298 WWOXQ9NZC7 414 aa18.44■□□□□ 0.54
CLSTN1-202ENST00000377298 MAGEB16A2A368 324 aa18.44■□□□□ 0.54
CLSTN1-202ENST00000377298 TRPC5OSA6NMA1 111 aa18.44■□□□□ 0.54
CLSTN1-202ENST00000377298 FKTNO75072 461 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms