RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 SERPINB8P50452 374 aa14.06□□□□□ -0.16
GPC6-201ENST00000377047 TTI2Q6NXR4 508 aa14.06□□□□□ -0.16
GPC6-201ENST00000377047 PDLIM2Q96JY6 352 aa14.06□□□□□ -0.16
GPC6-201ENST00000377047 EPN3Q9H201 632 aa14.06□□□□□ -0.16
GPC6-201ENST00000377047 LRRC40Q9H9A6 602 aa14.06□□□□□ -0.16
GPC6-201ENST00000377047 PPP1R37O75864 691 aa14.06□□□□□ -0.16
GPC6-201ENST00000377047 APOA4P06727 396 aa14.06□□□□□ -0.16
GPC6-201ENST00000377047 DARSP14868 501 aaKnown RBP14.06□□□□□ -0.16
GPC6-201ENST00000377047 PLIN5Q00G26 463 aa14.06□□□□□ -0.16
GPC6-201ENST00000377047 DNAL1Q4LDG9 190 aa14.06□□□□□ -0.16
GPC6-201ENST00000377047 ERMARDQ5T6L9 678 aa14.06□□□□□ -0.16
GPC6-201ENST00000377047 CACHD1Q5VU97 1274 aa14.06□□□□□ -0.16
GPC6-201ENST00000377047 PRPF39Q86UA1 669 aaKnown RBP14.06□□□□□ -0.16
GPC6-201ENST00000377047 CACUL1Q86Y37 369 aa14.06□□□□□ -0.16
GPC6-201ENST00000377047 CATSPER1Q8NEC5 780 aa14.06□□□□□ -0.16
GPC6-201ENST00000377047 TRPC5OSA6NMA1 111 aa14.05□□□□□ -0.16
GPC6-201ENST00000377047 OR1E1P30953 314 aa14.05□□□□□ -0.16
GPC6-201ENST00000377047 CYTH1Q15438 398 aa14.05□□□□□ -0.16
GPC6-201ENST00000377047 DEFB115Q30KQ5 88 aa14.05□□□□□ -0.16
GPC6-201ENST00000377047 CENPPQ6IPU0 288 aa14.05□□□□□ -0.16
GPC6-201ENST00000377047 USP15Q9Y4E8 981 aaPredicted RBP14.05□□□□□ -0.16
GPC6-201ENST00000377047 EIF4E1BA6NMX2 242 aaKnown RBP14.05□□□□□ -0.16
GPC6-201ENST00000377047 SKAP2O75563 359 aaPredicted RBP14.05□□□□□ -0.16
GPC6-201ENST00000377047 GLP2RO95838 553 aa14.05□□□□□ -0.16
GPC6-201ENST00000377047 GLRBP48167 497 aa14.05□□□□□ -0.16
GPC6-201ENST00000377047 CXCL17Q6UXB2 119 aa14.05□□□□□ -0.16
GPC6-201ENST00000377047 DTX3LQ8TDB6 740 aa14.05□□□□□ -0.16
GPC6-201ENST00000377047 CMTM5Q96DZ9 223 aa14.05□□□□□ -0.16
GPC6-201ENST00000377047 FAM167BQ9BTA0 163 aa14.05□□□□□ -0.16
GPC6-201ENST00000377047 TMEM121Q9BTD3 319 aa14.05□□□□□ -0.16
GPC6-201ENST00000377047 F8W810 466 aa14.05□□□□□ -0.16
GPC6-201ENST00000377047 TBC1D4O60343 1298 aa14.05□□□□□ -0.16
GPC6-201ENST00000377047 PLA2G6O60733 806 aa14.05□□□□□ -0.16
GPC6-201ENST00000377047 GPC1P35052 558 aa14.05□□□□□ -0.16
GPC6-201ENST00000377047 CHI3L1P36222 383 aaPredicted RBP14.05□□□□□ -0.16
GPC6-201ENST00000377047 PRIM2P49643 509 aa14.05□□□□□ -0.16
GPC6-201ENST00000377047 INHBEP58166 350 aa14.05□□□□□ -0.16
GPC6-201ENST00000377047 CNTN1Q12860 1018 aa14.05□□□□□ -0.16
GPC6-201ENST00000377047 DMAP1Q9NPF5 467 aaPredicted RBP14.05□□□□□ -0.16
GPC6-201ENST00000377047 UXTQ9UBK9 157 aaPredicted RBP14.05□□□□□ -0.16
GPC6-201ENST00000377047 MTO1Q9Y2Z2 717 aaKnown RBP14.05□□□□□ -0.16
GPC6-201ENST00000377047 MRPL42Q9Y6G3 142 aaKnown RBP14.05□□□□□ -0.16
GPC6-201ENST00000377047 RTN3O95197 1032 aaPredicted RBP14.05□□□□□ -0.16
GPC6-201ENST00000377047 ANKS6Q68DC2 871 aa14.05□□□□□ -0.16
GPC6-201ENST00000377047 CATSPERGQ6ZRH7 1159 aa14.05□□□□□ -0.16
GPC6-201ENST00000377047 TNIP2Q8NFZ5 429 aa14.05□□□□□ -0.16
GPC6-201ENST00000377047 CYGBQ8WWM9 190 aa14.05□□□□□ -0.16
GPC6-201ENST00000377047 TINF2Q9BSI4 451 aa14.05□□□□□ -0.16
GPC6-201ENST00000377047 INTS13Q9NVM9 706 aa14.05□□□□□ -0.16
GPC6-201ENST00000377047 DRG1Q9Y295 367 aaKnown RBP14.05□□□□□ -0.16
GPC6-201ENST00000377047 NR2E3Q9Y5X4 410 aa14.05□□□□□ -0.16
GPC6-201ENST00000377047 NFASCO94856 1347 aa14.05□□□□□ -0.16
GPC6-201ENST00000377047 ACKR2O00590 384 aa14.05□□□□□ -0.16
GPC6-201ENST00000377047 FAM107AO95990 144 aa14.05□□□□□ -0.16
GPC6-201ENST00000377047 HOXC6P09630 235 aa14.05□□□□□ -0.16
GPC6-201ENST00000377047 CCDC130P13994 396 aa14.05□□□□□ -0.16
GPC6-201ENST00000377047 FNDC3BQ53EP0 1204 aaKnown RBP14.05□□□□□ -0.16
GPC6-201ENST00000377047 ZNF438Q7Z4V0 828 aa14.05□□□□□ -0.16
GPC6-201ENST00000377047 PALB2Q86YC2 1186 aa14.05□□□□□ -0.16
GPC6-201ENST00000377047 RIOX2Q8IUF8 465 aa14.05□□□□□ -0.16
GPC6-201ENST00000377047 RBBP8Q99708 897 aa14.05□□□□□ -0.16
GPC6-201ENST00000377047 ATP13A1Q9HD20 1204 aa14.05□□□□□ -0.16
GPC6-201ENST00000377047 RBM22Q9NW64 420 aaKnown RBP eCLIP14.05□□□□□ -0.16
GPC6-201ENST00000377047 PLAGL2Q9UPG8 496 aa14.05□□□□□ -0.16
GPC6-201ENST00000377047 DYRK3O43781 588 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 RAMP2O60895 175 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 FGFR1P11362 822 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 SKOR1P84550 965 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 SP3Q02447 781 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 CNGA3Q16281 694 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 FUT11Q495W5 492 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 PTAR1Q7Z6K3 402 aaPredicted RBP14.04□□□□□ -0.16
GPC6-201ENST00000377047 ZNF473Q8WTR7 871 aaKnown RBP14.04□□□□□ -0.16
GPC6-201ENST00000377047 PHF21AQ96BD5 680 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 FAM111AQ96PZ2 611 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 KCNK16Q96T55 309 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 CCDC3Q9BQI4 270 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 THTPAQ9BU02 230 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 CYP4F12Q9HCS2 524 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 RNF19AQ9NV58 838 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 TBC1D13Q9NVG8 400 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 IRF6O14896 467 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 MSH3P20585 1137 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 LRRC36Q1X8D7 754 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 FKBP1CQ5VVH2 108 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 C16orf59Q7L2K0 433 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 COLGALT1Q8NBJ5 622 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 TUBGCP3Q96CW5 907 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 MFSD1Q9H3U5 465 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 FAM198AQ9UFP1 575 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 MSRAQ9UJ68 235 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 IFRD1O00458 451 aaPredicted RBP14.04□□□□□ -0.16
GPC6-201ENST00000377047 PROSCO94903 275 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 TUBP50607 506 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 NCKAP1LP55160 1127 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 MAPK7Q13164 816 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 MARC1Q5VT66 337 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 PARP9Q8IXQ6 854 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 LGI2Q8N0V4 545 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 ABRAQ8N0Z2 381 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms