RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 KRT37O76014 449 aa26.29■■□□□ 1.8
C9orf40-201ENST00000376854 MAP3K6O95382 1288 aa26.29■■□□□ 1.8
C9orf40-201ENST00000376854 C22orf31O95567 290 aa26.29■■□□□ 1.8
C9orf40-201ENST00000376854 TGM2P21980 687 aa26.29■■□□□ 1.8
C9orf40-201ENST00000376854 OSBPP22059 807 aa26.29■■□□□ 1.8
C9orf40-201ENST00000376854 CDC25CP30307 473 aa26.29■■□□□ 1.8
C9orf40-201ENST00000376854 RGS7P49802 495 aa26.29■■□□□ 1.8
C9orf40-201ENST00000376854 CBLBQ13191 982 aa26.29■■□□□ 1.8
C9orf40-201ENST00000376854 BOLA3Q53S33 107 aa26.29■■□□□ 1.8
C9orf40-201ENST00000376854 CDHR3Q6ZTQ4 885 aa26.29■■□□□ 1.8
C9orf40-201ENST00000376854 ILDR2Q71H61 639 aa26.29■■□□□ 1.8
C9orf40-201ENST00000376854 SULF1Q8IWU6 871 aa26.29■■□□□ 1.8
C9orf40-201ENST00000376854 PQLC3Q8N755 202 aa26.29■■□□□ 1.8
C9orf40-201ENST00000376854 PRR11Q96HE9 360 aaPredicted RBP26.29■■□□□ 1.8
C9orf40-201ENST00000376854 KLC2Q9H0B6 622 aa26.29■■□□□ 1.8
C9orf40-201ENST00000376854 RNPEPQ9H4A4 650 aa26.29■■□□□ 1.8
C9orf40-201ENST00000376854 GBA2Q9HCG7 927 aaPredicted RBP26.29■■□□□ 1.8
C9orf40-201ENST00000376854 NGRNQ9NPE2 291 aaKnown RBP26.29■■□□□ 1.8
C9orf40-201ENST00000376854 PDGFCQ9NRA1 345 aa26.29■■□□□ 1.8
C9orf40-201ENST00000376854 LRRC42Q9Y546 428 aa26.29■■□□□ 1.8
C9orf40-201ENST00000376854 CXorf49A8MYA2 514 aaPredicted RBP26.28■■□□□ 1.8
C9orf40-201ENST00000376854 IL1BP01584 269 aa26.28■■□□□ 1.8
C9orf40-201ENST00000376854 PFKMP08237 780 aa26.28■■□□□ 1.8
C9orf40-201ENST00000376854 SNRPAP09012 282 aaKnown RBP26.28■■□□□ 1.8
C9orf40-201ENST00000376854 AMHR2Q16671 573 aa26.28■■□□□ 1.8
C9orf40-201ENST00000376854 RFWD3Q6PCD5 774 aa26.28■■□□□ 1.8
C9orf40-201ENST00000376854 C4orf50Q6ZRC1 276 aa26.28■■□□□ 1.8
C9orf40-201ENST00000376854 CAND1Q86VP6 1230 aaKnown RBP26.28■■□□□ 1.8
C9orf40-201ENST00000376854 DCPSQ96C86 337 aaKnown RBP26.28■■□□□ 1.8
C9orf40-201ENST00000376854 PCDH18Q9HCL0 1135 aa26.28■■□□□ 1.8
C9orf40-201ENST00000376854 ETNK2Q9NVF9 386 aa26.28■■□□□ 1.8
C9orf40-201ENST00000376854 MCM3APO60318 1980 aa26.28■■□□□ 1.8
C9orf40-201ENST00000376854 A0A087WZ62 844 aa26.28■■□□□ 1.8
C9orf40-201ENST00000376854 C2orf71A6NGG8 1288 aa26.28■■□□□ 1.8
C9orf40-201ENST00000376854 APRTP07741 180 aa26.28■■□□□ 1.8
C9orf40-201ENST00000376854 FAM187BQ17R55 369 aa26.28■■□□□ 1.8
C9orf40-201ENST00000376854 CCDC62Q6P9F0 684 aa26.28■■□□□ 1.8
C9orf40-201ENST00000376854 C12orf29Q8N999 325 aa26.28■■□□□ 1.8
C9orf40-201ENST00000376854 FDXACB1Q9BRP7 624 aaPredicted RBP26.28■■□□□ 1.8
C9orf40-201ENST00000376854 ZNF180Q9UJW8 692 aa26.28■■□□□ 1.8
C9orf40-201ENST00000376854 KLF11O14901 512 aa26.27■■□□□ 1.8
C9orf40-201ENST00000376854 LUC7L3O95232 432 aaKnown RBP26.27■■□□□ 1.8
C9orf40-201ENST00000376854 MYL2P10916 166 aa26.27■■□□□ 1.8
C9orf40-201ENST00000376854 PCDH19Q8TAB3 1148 aa26.27■■□□□ 1.8
C9orf40-201ENST00000376854 NT5C1AQ9BXI3 368 aa26.27■■□□□ 1.8
C9orf40-201ENST00000376854 KIAA1257Q9ULG3 409 aa26.27■■□□□ 1.8
C9orf40-201ENST00000376854 BCLAF3A2AJT9 711 aaKnown RBP26.27■■□□□ 1.8
C9orf40-201ENST00000376854 GYG2O15488 501 aa26.27■■□□□ 1.8
C9orf40-201ENST00000376854 LMNAP02545 664 aaKnown RBP26.27■■□□□ 1.8
C9orf40-201ENST00000376854 TXNP10599 105 aaKnown RBP26.27■■□□□ 1.8
C9orf40-201ENST00000376854 GOLGA7BQ2TAP0 167 aa26.27■■□□□ 1.8
C9orf40-201ENST00000376854 FAM172AQ8WUF8 416 aa26.27■■□□□ 1.8
C9orf40-201ENST00000376854 DCLRE1BQ9H816 532 aa26.27■■□□□ 1.8
C9orf40-201ENST00000376854 PLAC1Q9HBJ0 212 aa26.27■■□□□ 1.8
C9orf40-201ENST00000376854 TRDMT1O14717 391 aaKnown RBP26.26■■□□□ 1.79
C9orf40-201ENST00000376854 GSC2O15499 205 aa26.26■■□□□ 1.79
C9orf40-201ENST00000376854 PRKCHP24723 683 aa26.26■■□□□ 1.79
C9orf40-201ENST00000376854 RBP5P82980 135 aa26.26■■□□□ 1.79
C9orf40-201ENST00000376854 LGSNQ5TDP6 509 aa26.26■■□□□ 1.79
C9orf40-201ENST00000376854 SLC9A4Q6AI14 798 aa26.26■■□□□ 1.79
C9orf40-201ENST00000376854 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP26.26■■□□□ 1.79
C9orf40-201ENST00000376854 LRRN4Q8WUT4 740 aa26.26■■□□□ 1.79
C9orf40-201ENST00000376854 OXNAD1Q96HP4 312 aaPredicted RBP26.26■■□□□ 1.79
C9orf40-201ENST00000376854 ITGA11Q9UKX5 1188 aa26.26■■□□□ 1.79
C9orf40-201ENST00000376854 PLLPQ9Y342 182 aa26.26■■□□□ 1.79
C9orf40-201ENST00000376854 FAM237BA0A1B0GVD1 139 aa26.26■■□□□ 1.79
C9orf40-201ENST00000376854 DPYSL4O14531 572 aa26.26■■□□□ 1.79
C9orf40-201ENST00000376854 IREB2P48200 963 aaKnown RBP26.26■■□□□ 1.79
C9orf40-201ENST00000376854 PTDSS1P48651 473 aaKnown RBP26.26■■□□□ 1.79
C9orf40-201ENST00000376854 CA9Q16790 459 aa26.26■■□□□ 1.79
C9orf40-201ENST00000376854 CCDC110Q8TBZ0 833 aa26.26■■□□□ 1.79
C9orf40-201ENST00000376854 TEKT4Q8WW24 435 aa26.26■■□□□ 1.79
C9orf40-201ENST00000376854 MMP19Q99542 508 aa26.26■■□□□ 1.79
C9orf40-201ENST00000376854 DPP3Q9NY33 737 aa26.26■■□□□ 1.79
C9orf40-201ENST00000376854 DNAJC25-GNG10A0A024R161 153 aa26.25■■□□□ 1.79
C9orf40-201ENST00000376854 SLC25A27O95847 323 aa26.25■■□□□ 1.79
C9orf40-201ENST00000376854 ARF4P18085 180 aaPredicted RBP26.25■■□□□ 1.79
C9orf40-201ENST00000376854 SDC4P31431 198 aa26.25■■□□□ 1.79
C9orf40-201ENST00000376854 MAGEA6P43360 314 aa26.25■■□□□ 1.79
C9orf40-201ENST00000376854 KRT72Q14CN4 511 aa26.25■■□□□ 1.79
C9orf40-201ENST00000376854 KHDC1Q4VXA5 237 aaKnown RBP26.25■■□□□ 1.79
C9orf40-201ENST00000376854 OLFML1Q6UWY5 402 aa26.25■■□□□ 1.79
C9orf40-201ENST00000376854 DSTYKQ6XUX3 929 aa26.25■■□□□ 1.79
C9orf40-201ENST00000376854 MECRQ9BV79 373 aa26.25■■□□□ 1.79
C9orf40-201ENST00000376854 SNRNP25Q9BV90 132 aaKnown RBP26.25■■□□□ 1.79
C9orf40-201ENST00000376854 ADARB2Q9NS39 739 aaKnown RBP26.25■■□□□ 1.79
C9orf40-201ENST00000376854 ERAP1Q9NZ08 941 aa26.25■■□□□ 1.79
C9orf40-201ENST00000376854 PCNTO95613 3336 aa26.25■■□□□ 1.79
C9orf40-201ENST00000376854 POU5F1BQ06416 359 aa26.25■■□□□ 1.79
C9orf40-201ENST00000376854 GJC2Q5T442 439 aaPredicted RBP26.25■■□□□ 1.79
C9orf40-201ENST00000376854 TRIM68Q6AZZ1 485 aa26.25■■□□□ 1.79
C9orf40-201ENST00000376854 PMF1Q6P1K2 205 aa26.25■■□□□ 1.79
C9orf40-201ENST00000376854 RINLQ6ZS11 566 aa26.25■■□□□ 1.79
C9orf40-201ENST00000376854 TTC7BQ86TV6 843 aa26.25■■□□□ 1.79
C9orf40-201ENST00000376854 ERO1BQ86YB8 467 aa26.25■■□□□ 1.79
C9orf40-201ENST00000376854 SMYD2Q9NRG4 433 aa26.25■■□□□ 1.79
C9orf40-201ENST00000376854 SLC15A5A6NIM6 579 aa26.24■■□□□ 1.79
C9orf40-201ENST00000376854 I3L4J1 428 aa26.24■■□□□ 1.79
C9orf40-201ENST00000376854 FCHO1O14526 889 aa26.24■■□□□ 1.79
C9orf40-201ENST00000376854 APOEP02649 317 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms