RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 C1orf228Q6PIY5 440 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 FAM131BQ86XD5 332 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 SLC35B2Q8TB61 432 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 TEKT4Q8WW24 435 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 ARL8AQ96BM9 186 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 NCAPGQ9BPX3 1015 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 SEZ6LQ9BYH1 1024 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 PCDH18Q9HCL0 1135 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 DNAJC17Q9NVM6 304 aaKnown RBP13.47□□□□□ -0.25
TRIM40-206ENST00000376724 NAALADL1Q9UQQ1 740 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 DRG1Q9Y295 367 aaKnown RBP13.47□□□□□ -0.25
TRIM40-206ENST00000376724 ARHGEF37A1IGU5 675 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 APOC4-APOC2K7ER74 178 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 PITPNM1O00562 1244 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 TP73O15350 636 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 DAB1O75553 588 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 APOC2P02655 101 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 ITGAVP06756 1048 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 IL4RP24394 825 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 DAOAP59103 153 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 EIF3EP60228 445 aaKnown RBP13.47□□□□□ -0.25
TRIM40-206ENST00000376724 NME3Q13232 169 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 ANKRD20A8PQ5CZ79 823 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 IZUMO3Q5VZ72 239 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 DEFB128Q7Z7B8 93 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 ZC3H18Q86VM9 953 aaKnown RBP13.47□□□□□ -0.25
TRIM40-206ENST00000376724 CEP57Q86XR8 500 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 SPATA18Q8TC71 538 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 P3H4Q92791 437 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 NKD2Q969F2 451 aaPredicted RBP13.47□□□□□ -0.25
TRIM40-206ENST00000376724 RNF157Q96PX1 679 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 SH3GL2Q99962 352 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 TXLNGYQ9BZA5 131 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 CENPHQ9H3R5 247 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 HIPK3Q9H422 1215 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 POPDC2Q9HBU9 364 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 HCSTQ9UBK5 93 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 PCDHB8Q9UN66 801 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 AP4E1Q9UPM8 1137 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 TSC2P49815 1807 aa13.46□□□□□ -0.25
TRIM40-206ENST00000376724 HHLA1C9JL84 531 aa13.46□□□□□ -0.25
TRIM40-206ENST00000376724 M0QYT0 321 aa13.46□□□□□ -0.25
TRIM40-206ENST00000376724 MDM4O15151 490 aa13.46□□□□□ -0.25
TRIM40-206ENST00000376724 FBXO21O94952 628 aa13.46□□□□□ -0.25
TRIM40-206ENST00000376724 TYMPP19971 482 aa13.46□□□□□ -0.25
TRIM40-206ENST00000376724 PAX3P23760 479 aa13.46□□□□□ -0.25
TRIM40-206ENST00000376724 NOS2P35228 1153 aa13.46□□□□□ -0.25
TRIM40-206ENST00000376724 CHKAP35790 457 aa13.46□□□□□ -0.25
TRIM40-206ENST00000376724 GDF10P55107 478 aa13.46□□□□□ -0.25
TRIM40-206ENST00000376724 IFRD2Q12894 506 aaPredicted RBP13.46□□□□□ -0.25
TRIM40-206ENST00000376724 GPS1Q13098 491 aa13.46□□□□□ -0.25
TRIM40-206ENST00000376724 TFDP2Q14188 446 aa13.46□□□□□ -0.25
TRIM40-206ENST00000376724 KCTD16Q68DU8 428 aa13.46□□□□□ -0.25
TRIM40-206ENST00000376724 ADAM32Q8TC27 787 aa13.46□□□□□ -0.25
TRIM40-206ENST00000376724 RSAD2Q8WXG1 361 aa13.46□□□□□ -0.25
TRIM40-206ENST00000376724 PWWP2AQ96N64 755 aa13.46□□□□□ -0.25
TRIM40-206ENST00000376724 SEMA4AQ9H3S1 761 aa13.46□□□□□ -0.25
TRIM40-206ENST00000376724 FAM204AQ9H8W3 233 aa13.46□□□□□ -0.25
TRIM40-206ENST00000376724 TMPRSS4Q9NRS4 437 aa13.46□□□□□ -0.25
TRIM40-206ENST00000376724 STAP1Q9ULZ2 295 aa13.46□□□□□ -0.25
TRIM40-206ENST00000376724 HEY1Q9Y5J3 304 aa13.46□□□□□ -0.25
TRIM40-206ENST00000376724 GOLGA8KD6RF30 607 aa13.46□□□□□ -0.26
TRIM40-206ENST00000376724 H0YGN5 161 aa13.46□□□□□ -0.26
TRIM40-206ENST00000376724 APOL1O14791 398 aa13.46□□□□□ -0.26
TRIM40-206ENST00000376724 MCF2LO15068 1137 aa13.46□□□□□ -0.26
TRIM40-206ENST00000376724 CAPN15O75808 1086 aa13.46□□□□□ -0.26
TRIM40-206ENST00000376724 MAP3K6O95382 1288 aa13.46□□□□□ -0.26
TRIM40-206ENST00000376724 ZBED1O96006 694 aa13.46□□□□□ -0.26
TRIM40-206ENST00000376724 NCAM1P13591 858 aa13.46□□□□□ -0.26
TRIM40-206ENST00000376724 L1CAMP32004 1257 aa13.46□□□□□ -0.26
TRIM40-206ENST00000376724 CYP2C18P33260 490 aa13.46□□□□□ -0.26
TRIM40-206ENST00000376724 SKIDA1Q1XH10 827 aa13.46□□□□□ -0.26
TRIM40-206ENST00000376724 TTMPQ5BVD1 217 aa13.46□□□□□ -0.26
TRIM40-206ENST00000376724 RAB41Q5JT25 222 aa13.46□□□□□ -0.26
TRIM40-206ENST00000376724 UBAP2Q5T6F2 1119 aaKnown RBP13.46□□□□□ -0.26
TRIM40-206ENST00000376724 SLC39A5Q6ZMH5 540 aa13.46□□□□□ -0.26
TRIM40-206ENST00000376724 STRADAQ7RTN6 431 aa13.46□□□□□ -0.26
TRIM40-206ENST00000376724 SPATA2LQ8IUW3 424 aaPredicted RBP13.46□□□□□ -0.26
TRIM40-206ENST00000376724 PYROXD2Q8N2H3 581 aa13.46□□□□□ -0.26
TRIM40-206ENST00000376724 TAB3Q8N5C8 712 aaPredicted RBP13.46□□□□□ -0.26
TRIM40-206ENST00000376724 PCDH19Q8TAB3 1148 aa13.46□□□□□ -0.26
TRIM40-206ENST00000376724 UHMK1Q8TAS1 419 aaKnown RBP13.46□□□□□ -0.26
TRIM40-206ENST00000376724 SLC7A14Q8TBB6 771 aa13.46□□□□□ -0.26
TRIM40-206ENST00000376724 CASD1Q96PB1 797 aa13.46□□□□□ -0.26
TRIM40-206ENST00000376724 PKMYT1Q99640 499 aa13.46□□□□□ -0.26
TRIM40-206ENST00000376724 ELAC1Q9H777 363 aaKnown RBP13.46□□□□□ -0.26
TRIM40-206ENST00000376724 NRDE2Q9H7Z3 1164 aa13.46□□□□□ -0.26
TRIM40-206ENST00000376724 CSNK1G1Q9HCP0 422 aa13.46□□□□□ -0.26
TRIM40-206ENST00000376724 DMAP1Q9NPF5 467 aaPredicted RBP13.46□□□□□ -0.26
TRIM40-206ENST00000376724 CNGB3Q9NQW8 809 aa13.46□□□□□ -0.26
TRIM40-206ENST00000376724 ADAM21Q9UKJ8 722 aa13.46□□□□□ -0.26
TRIM40-206ENST00000376724 NFS1Q9Y697 457 aa13.46□□□□□ -0.26
TRIM40-206ENST00000376724 GOLGA6CA6NDK9 693 aa13.45□□□□□ -0.26
TRIM40-206ENST00000376724 DCDC2CA8MYV0 355 aa13.45□□□□□ -0.26
TRIM40-206ENST00000376724 FYNP06241 537 aa13.45□□□□□ -0.26
TRIM40-206ENST00000376724 GOLGA6DP0CG33 693 aa13.45□□□□□ -0.26
TRIM40-206ENST00000376724 RBP3P10745 1247 aa13.45□□□□□ -0.26
TRIM40-206ENST00000376724 COL6A1P12109 1028 aa13.45□□□□□ -0.26
TRIM40-206ENST00000376724 CYP2F1P24903 491 aa13.45□□□□□ -0.26
TRIM40-206ENST00000376724 GRIK1P39086 918 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms