RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 NUGGCQ68CJ6 796 aa21.04■□□□□ 0.96
VSX1-202ENST00000376709 SLC9A4Q6AI14 798 aa21.04■□□□□ 0.96
VSX1-202ENST00000376709 FAF2Q96CS3 445 aa21.04■□□□□ 0.96
VSX1-202ENST00000376709 DHX35Q9H5Z1 703 aaKnown RBP21.04■□□□□ 0.96
VSX1-202ENST00000376709 CYLDQ9NQC7 956 aa21.04■□□□□ 0.96
VSX1-202ENST00000376709 FGFR1OP2Q9NVK5 253 aa21.04■□□□□ 0.96
VSX1-202ENST00000376709 RABGEF1Q9UJ41 708 aa21.04■□□□□ 0.96
VSX1-202ENST00000376709 GABRQQ9UN88 632 aa21.04■□□□□ 0.96
VSX1-202ENST00000376709 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.04■□□□□ 0.96
VSX1-202ENST00000376709 H0YHG0 523 aa21.04■□□□□ 0.96
VSX1-202ENST00000376709 DUSP11O75319 330 aaKnown RBP21.04■□□□□ 0.96
VSX1-202ENST00000376709 ATP2A2P16615 1042 aaKnown RBP21.04■□□□□ 0.96
VSX1-202ENST00000376709 HOXC8P31273 242 aa21.04■□□□□ 0.96
VSX1-202ENST00000376709 SCNN1AP37088 669 aa21.04■□□□□ 0.96
VSX1-202ENST00000376709 SLC8A3P57103 927 aa21.04■□□□□ 0.96
VSX1-202ENST00000376709 ITIH4Q14624 930 aa21.04■□□□□ 0.96
VSX1-202ENST00000376709 SYCP2LQ5T4T6 812 aa21.04■□□□□ 0.96
VSX1-202ENST00000376709 TAF2Q6P1X5 1199 aa21.04■□□□□ 0.96
VSX1-202ENST00000376709 FAM228AQ86W67 206 aa21.04■□□□□ 0.96
VSX1-202ENST00000376709 B3GALNT2Q8NCR0 500 aa21.04■□□□□ 0.96
VSX1-202ENST00000376709 SGSM3Q96HU1 749 aa21.04■□□□□ 0.96
VSX1-202ENST00000376709 HSFY1Q96LI6 401 aa21.04■□□□□ 0.96
VSX1-202ENST00000376709 TGS1Q96RS0 853 aaKnown RBP21.04■□□□□ 0.96
VSX1-202ENST00000376709 SMC6Q96SB8 1091 aa21.04■□□□□ 0.96
VSX1-202ENST00000376709 SENP1Q9P0U3 644 aa21.04■□□□□ 0.96
VSX1-202ENST00000376709 PAK5Q9P286 719 aa21.04■□□□□ 0.96
VSX1-202ENST00000376709 CFAP69A5D8W1 941 aa21.03■□□□□ 0.96
VSX1-202ENST00000376709 M0QZ92 97 aa21.03■□□□□ 0.96
VSX1-202ENST00000376709 SPAG7O75391 227 aa21.03■□□□□ 0.96
VSX1-202ENST00000376709 CYP2F1P24903 491 aa21.03■□□□□ 0.96
VSX1-202ENST00000376709 ATXN1P54253 815 aaKnown RBP21.03■□□□□ 0.96
VSX1-202ENST00000376709 EFHC2Q5JST6 749 aa21.03■□□□□ 0.96
VSX1-202ENST00000376709 GNASQ5JWF2 1037 aa21.03■□□□□ 0.96
VSX1-202ENST00000376709 ARCQ7LC44 396 aa21.03■□□□□ 0.96
VSX1-202ENST00000376709 TOP6BLQ8N6T0 577 aa21.03■□□□□ 0.96
VSX1-202ENST00000376709 TRIB2Q92519 343 aa21.03■□□□□ 0.96
VSX1-202ENST00000376709 ZFP42Q96MM3 310 aa21.03■□□□□ 0.96
VSX1-202ENST00000376709 WDR83Q9BRX9 315 aaKnown RBP21.03■□□□□ 0.96
VSX1-202ENST00000376709 C11orf84Q9BUA3 381 aaPredicted RBP21.03■□□□□ 0.96
VSX1-202ENST00000376709 USP29Q9HBJ7 922 aa21.03■□□□□ 0.96
VSX1-202ENST00000376709 RAB6BQ9NRW1 208 aa21.03■□□□□ 0.96
VSX1-202ENST00000376709 CA12O43570 354 aa21.03■□□□□ 0.96
VSX1-202ENST00000376709 CYBAP13498 195 aa21.03■□□□□ 0.96
VSX1-202ENST00000376709 RBL1P28749 1068 aa21.03■□□□□ 0.96
VSX1-202ENST00000376709 RPL34P49207 117 aaKnown RBP21.03■□□□□ 0.96
VSX1-202ENST00000376709 DPYSL2Q16555 572 aa21.03■□□□□ 0.96
VSX1-202ENST00000376709 KLHL38Q2WGJ6 581 aa21.03■□□□□ 0.96
VSX1-202ENST00000376709 FBXW10Q5XX13 1052 aa21.03■□□□□ 0.96
VSX1-202ENST00000376709 LIMS2Q7Z4I7 341 aa21.03■□□□□ 0.96
VSX1-202ENST00000376709 FBF1Q8TES7 1133 aa21.03■□□□□ 0.96
VSX1-202ENST00000376709 PAIP2Q9BPZ3 127 aaKnown RBP21.03■□□□□ 0.96
VSX1-202ENST00000376709 ADAM33Q9BZ11 813 aa21.03■□□□□ 0.96
VSX1-202ENST00000376709 NRDE2Q9H7Z3 1164 aa21.03■□□□□ 0.96
VSX1-202ENST00000376709 KIF9Q9HAQ2 790 aa21.03■□□□□ 0.96
VSX1-202ENST00000376709 ZMYND8Q9ULU4 1186 aaPredicted RBP21.03■□□□□ 0.96
VSX1-202ENST00000376709 AP4E1Q9UPM8 1137 aa21.03■□□□□ 0.96
VSX1-202ENST00000376709 CHMP2BQ9UQN3 213 aa21.03■□□□□ 0.96
VSX1-202ENST00000376709 PGK1P00558 417 aa21.02■□□□□ 0.96
VSX1-202ENST00000376709 TKTP29401 623 aaKnown RBP21.02■□□□□ 0.96
VSX1-202ENST00000376709 L1CAMP32004 1257 aa21.02■□□□□ 0.96
VSX1-202ENST00000376709 IL9RQ01113 521 aa21.02■□□□□ 0.96
VSX1-202ENST00000376709 KCNJ11Q14654 390 aa21.02■□□□□ 0.96
VSX1-202ENST00000376709 EFTUD2Q15029 972 aaKnown RBP eCLIP21.02■□□□□ 0.96
VSX1-202ENST00000376709 RASA2Q15283 850 aa21.02■□□□□ 0.96
VSX1-202ENST00000376709 CENPIQ92674 756 aaPredicted RBP21.02■□□□□ 0.96
VSX1-202ENST00000376709 FAM149B1Q96BN6 582 aa21.02■□□□□ 0.96
VSX1-202ENST00000376709 MAGEB18Q96M61 343 aa21.02■□□□□ 0.96
VSX1-202ENST00000376709 ACSS3Q9H6R3 686 aa21.02■□□□□ 0.96
VSX1-202ENST00000376709 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.02■□□□□ 0.96
VSX1-202ENST00000376709 FETUBQ9UGM5 382 aa21.02■□□□□ 0.96
VSX1-202ENST00000376709 ZNF487B1APH4 448 aa21.02■□□□□ 0.95
VSX1-202ENST00000376709 CYB561D2O14569 222 aa21.02■□□□□ 0.95
VSX1-202ENST00000376709 PTGESO14684 152 aa21.02■□□□□ 0.95
VSX1-202ENST00000376709 XPO1O14980 1071 aaKnown RBP21.02■□□□□ 0.95
VSX1-202ENST00000376709 CHADO15335 359 aa21.02■□□□□ 0.95
VSX1-202ENST00000376709 ATP2C2O75185 946 aa21.02■□□□□ 0.95
VSX1-202ENST00000376709 WARSP23381 471 aaKnown RBP21.02■□□□□ 0.95
VSX1-202ENST00000376709 TM4SF4P48230 202 aa21.02■□□□□ 0.95
VSX1-202ENST00000376709 FCGRTP55899 365 aa21.02■□□□□ 0.95
VSX1-202ENST00000376709 ADIGQ0VDE8 80 aa21.02■□□□□ 0.95
VSX1-202ENST00000376709 EFHC1Q5JVL4 640 aa21.02■□□□□ 0.95
VSX1-202ENST00000376709 CXCL17Q6UXB2 119 aa21.02■□□□□ 0.95
VSX1-202ENST00000376709 PIGZQ86VD9 579 aa21.02■□□□□ 0.95
VSX1-202ENST00000376709 OSTM1Q86WC4 334 aa21.02■□□□□ 0.95
VSX1-202ENST00000376709 C4orf33Q8N1A6 199 aa21.02■□□□□ 0.95
VSX1-202ENST00000376709 CCT6BQ92526 530 aa21.02■□□□□ 0.95
VSX1-202ENST00000376709 BCLAF3A2AJT9 711 aaKnown RBP21.01■□□□□ 0.95
VSX1-202ENST00000376709 SNX3O60493 162 aa21.01■□□□□ 0.95
VSX1-202ENST00000376709 ACAT1P24752 427 aaKnown RBP21.01■□□□□ 0.95
VSX1-202ENST00000376709 LRPAP1P30533 357 aa21.01■□□□□ 0.95
VSX1-202ENST00000376709 ELK3P41970 407 aa21.01■□□□□ 0.95
VSX1-202ENST00000376709 MRPS6P82932 125 aaKnown RBP21.01■□□□□ 0.95
VSX1-202ENST00000376709 ACTN3Q08043 901 aaPredicted RBP21.01■□□□□ 0.95
VSX1-202ENST00000376709 ZKSCAN8Q15776 578 aaPredicted RBP21.01■□□□□ 0.95
VSX1-202ENST00000376709 FAM182AQ5T1J6 154 aa21.01■□□□□ 0.95
VSX1-202ENST00000376709 PAXIP1Q6ZW49 1069 aaPredicted RBP21.01■□□□□ 0.95
VSX1-202ENST00000376709 RTP4Q96DX8 246 aa21.01■□□□□ 0.95
VSX1-202ENST00000376709 PAFAH2Q99487 392 aa21.01■□□□□ 0.95
VSX1-202ENST00000376709 ACTR5Q9H9F9 607 aaPredicted RBP21.01■□□□□ 0.95
VSX1-202ENST00000376709 SMG5Q9UPR3 1016 aaKnown RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms