RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 ITM2AO43736 263 aa17.13■□□□□ 0.33
TRIM39-201ENST00000376656 CCNT2O60583 730 aaKnown RBP17.13■□□□□ 0.33
TRIM39-201ENST00000376656 TOM1L1O75674 476 aa17.13■□□□□ 0.33
TRIM39-201ENST00000376656 FKBP1AP62942 108 aaKnown RBP17.13■□□□□ 0.33
TRIM39-201ENST00000376656 TTLL12Q14166 644 aaPredicted RBP17.13■□□□□ 0.33
TRIM39-201ENST00000376656 MROH9Q5TGP6 573 aa17.13■□□□□ 0.33
TRIM39-201ENST00000376656 ISLR2Q6UXK2 745 aa17.13■□□□□ 0.33
TRIM39-201ENST00000376656 RMDN3Q96TC7 470 aa17.13■□□□□ 0.33
TRIM39-201ENST00000376656 MIS12Q9H081 205 aa17.13■□□□□ 0.33
TRIM39-201ENST00000376656 CYTH4Q9UIA0 394 aa17.13■□□□□ 0.33
TRIM39-201ENST00000376656 HMX2A2RU54 273 aa17.13■□□□□ 0.33
TRIM39-201ENST00000376656 PROCP04070 461 aa17.13■□□□□ 0.33
TRIM39-201ENST00000376656 EDN1P05305 212 aa17.13■□□□□ 0.33
TRIM39-201ENST00000376656 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.13■□□□□ 0.33
TRIM39-201ENST00000376656 DPY19L2Q6NUT2 758 aa17.13■□□□□ 0.33
TRIM39-201ENST00000376656 TMEM143Q96AN5 459 aa17.13■□□□□ 0.33
TRIM39-201ENST00000376656 PDCD2LQ9BRP1 358 aa17.13■□□□□ 0.33
TRIM39-201ENST00000376656 PENKP01210 267 aaPredicted RBP17.12■□□□□ 0.33
TRIM39-201ENST00000376656 RABGAP1LQ5R372 815 aa17.12■□□□□ 0.33
TRIM39-201ENST00000376656 UGT2A3Q6UWM9 527 aa17.12■□□□□ 0.33
TRIM39-201ENST00000376656 SCARA5Q6ZMJ2 495 aa17.12■□□□□ 0.33
TRIM39-201ENST00000376656 NGLY1Q96IV0 654 aa17.12■□□□□ 0.33
TRIM39-201ENST00000376656 IMPG2Q9BZV3 1241 aa17.12■□□□□ 0.33
TRIM39-201ENST00000376656 CYP26B1Q9NR63 512 aa17.12■□□□□ 0.33
TRIM39-201ENST00000376656 ZNF219Q9P2Y4 722 aaPredicted RBP17.12■□□□□ 0.33
TRIM39-201ENST00000376656 TMCO1Q9UM00 188 aa17.12■□□□□ 0.33
TRIM39-201ENST00000376656 DNAJC16Q9Y2G8 782 aa17.12■□□□□ 0.33
TRIM39-201ENST00000376656 ASS1P00966 412 aaKnown RBP17.12■□□□□ 0.33
TRIM39-201ENST00000376656 ASLP04424 464 aa17.12■□□□□ 0.33
TRIM39-201ENST00000376656 CHN2P52757 468 aa17.12■□□□□ 0.33
TRIM39-201ENST00000376656 MYL6P60660 151 aa17.12■□□□□ 0.33
TRIM39-201ENST00000376656 PEX6Q13608 980 aa17.12■□□□□ 0.33
TRIM39-201ENST00000376656 MTERF2Q49AM1 385 aa17.12■□□□□ 0.33
TRIM39-201ENST00000376656 LGSNQ5TDP6 509 aa17.12■□□□□ 0.33
TRIM39-201ENST00000376656 FAM210AQ96ND0 272 aa17.12■□□□□ 0.33
TRIM39-201ENST00000376656 ZNF518BQ9C0D4 1074 aa17.12■□□□□ 0.33
TRIM39-201ENST00000376656 THAP1Q9NVV9 213 aa17.12■□□□□ 0.33
TRIM39-201ENST00000376656 FBXO40Q9UH90 709 aa17.12■□□□□ 0.33
TRIM39-201ENST00000376656 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.11■□□□□ 0.33
TRIM39-201ENST00000376656 RAG1P15918 1043 aa17.11■□□□□ 0.33
TRIM39-201ENST00000376656 EIF4BP23588 611 aaKnown RBP17.11■□□□□ 0.33
TRIM39-201ENST00000376656 PRKCHP24723 683 aa17.11■□□□□ 0.33
TRIM39-201ENST00000376656 MIPP30301 263 aa17.11■□□□□ 0.33
TRIM39-201ENST00000376656 SERPINB6P35237 376 aa17.11■□□□□ 0.33
TRIM39-201ENST00000376656 USP46P62068 366 aa17.11■□□□□ 0.33
TRIM39-201ENST00000376656 ANKRD20A4Q4UJ75 823 aa17.11■□□□□ 0.33
TRIM39-201ENST00000376656 TCHHL1Q5QJ38 904 aaPredicted RBP17.11■□□□□ 0.33
TRIM39-201ENST00000376656 PGM2L1Q6PCE3 622 aa17.11■□□□□ 0.33
TRIM39-201ENST00000376656 TRMT10BQ6PF06 316 aaKnown RBP17.11■□□□□ 0.33
TRIM39-201ENST00000376656 ADGRF2Q8IZF7 708 aa17.11■□□□□ 0.33
TRIM39-201ENST00000376656 MKS1Q9NXB0 559 aa17.11■□□□□ 0.33
TRIM39-201ENST00000376656 CHADO15335 359 aa17.11■□□□□ 0.33
TRIM39-201ENST00000376656 ATP5BP06576 529 aaKnown RBP17.11■□□□□ 0.33
TRIM39-201ENST00000376656 SMIM18P0DKX4 95 aa17.11■□□□□ 0.33
TRIM39-201ENST00000376656 CDH5P33151 784 aaPredicted RBP17.11■□□□□ 0.33
TRIM39-201ENST00000376656 COPAP53621 1224 aa17.11■□□□□ 0.33
TRIM39-201ENST00000376656 PSMC1P62191 440 aaKnown RBP17.11■□□□□ 0.33
TRIM39-201ENST00000376656 R3HDM1Q15032 1099 aaKnown RBP17.11■□□□□ 0.33
TRIM39-201ENST00000376656 RSPH3Q86UC2 560 aa17.11■□□□□ 0.33
TRIM39-201ENST00000376656 LCA5Q86VQ0 697 aa17.11■□□□□ 0.33
TRIM39-201ENST00000376656 PPP1R14CQ8TAE6 165 aa17.11■□□□□ 0.33
TRIM39-201ENST00000376656 DNAJC1Q96KC8 554 aaKnown RBP17.11■□□□□ 0.33
TRIM39-201ENST00000376656 PXMP2Q9NR77 195 aa17.11■□□□□ 0.33
TRIM39-201ENST00000376656 GALNT8Q9NY28 637 aa17.11■□□□□ 0.33
TRIM39-201ENST00000376656 CDH22Q9UJ99 828 aa17.11■□□□□ 0.33
TRIM39-201ENST00000376656 SRCAPQ6ZRS2 3230 aa17.11■□□□□ 0.33
TRIM39-201ENST00000376656 SMIM31A0A1B0GVY4 71 aa17.11■□□□□ 0.33
TRIM39-201ENST00000376656 H7C0C1 242 aa17.11■□□□□ 0.33
TRIM39-201ENST00000376656 ALDH1B1P30837 517 aa17.11■□□□□ 0.33
TRIM39-201ENST00000376656 ATP5OP48047 213 aa17.11■□□□□ 0.33
TRIM39-201ENST00000376656 PRKCEQ02156 737 aa17.11■□□□□ 0.33
TRIM39-201ENST00000376656 NOMO1Q15155 1222 aa17.11■□□□□ 0.33
TRIM39-201ENST00000376656 C16orf46Q6P387 395 aa17.11■□□□□ 0.33
TRIM39-201ENST00000376656 C1orf228Q6PIY5 440 aa17.11■□□□□ 0.33
TRIM39-201ENST00000376656 CAND1Q86VP6 1230 aaKnown RBP17.11■□□□□ 0.33
TRIM39-201ENST00000376656 HPS6Q86YV9 775 aa17.11■□□□□ 0.33
TRIM39-201ENST00000376656 CCDC60Q8IWA6 550 aaPredicted RBP17.11■□□□□ 0.33
TRIM39-201ENST00000376656 CMASQ8NFW8 434 aaPredicted RBP17.11■□□□□ 0.33
TRIM39-201ENST00000376656 RAB3IL1Q8TBN0 382 aa17.11■□□□□ 0.33
TRIM39-201ENST00000376656 JDP2Q8WYK2 163 aa17.11■□□□□ 0.33
TRIM39-201ENST00000376656 ATP6V0A1Q93050 837 aa17.11■□□□□ 0.33
TRIM39-201ENST00000376656 GCNAQ96QF7 691 aa17.11■□□□□ 0.33
TRIM39-201ENST00000376656 POMPQ9Y244 141 aa17.11■□□□□ 0.33
TRIM39-201ENST00000376656 ZNF646O15015 1829 aaPredicted RBP17.11■□□□□ 0.33
TRIM39-201ENST00000376656 C15orf38-AP3S2A0A0A6YYH1 394 aa17.1■□□□□ 0.33
TRIM39-201ENST00000376656 CRHR1P34998 444 aa17.1■□□□□ 0.33
TRIM39-201ENST00000376656 FOLH1Q04609 750 aa17.1■□□□□ 0.33
TRIM39-201ENST00000376656 DGKZQ13574 1117 aa17.1■□□□□ 0.33
TRIM39-201ENST00000376656 MAP7Q14244 749 aa17.1■□□□□ 0.33
TRIM39-201ENST00000376656 MYBPC3Q14896 1274 aa17.1■□□□□ 0.33
TRIM39-201ENST00000376656 GRAMD1BQ3KR37 738 aa17.1■□□□□ 0.33
TRIM39-201ENST00000376656 FASTKD1Q53R41 847 aaKnown RBP17.1■□□□□ 0.33
TRIM39-201ENST00000376656 ARPINQ7Z6K5 226 aa17.1■□□□□ 0.33
TRIM39-201ENST00000376656 WDR75Q8IWA0 830 aaKnown RBP17.1■□□□□ 0.33
TRIM39-201ENST00000376656 LRRN4Q8WUT4 740 aa17.1■□□□□ 0.33
TRIM39-201ENST00000376656 HSFX1Q9UBD0 423 aa17.1■□□□□ 0.33
TRIM39-201ENST00000376656 SORCS3Q9UPU3 1222 aa17.1■□□□□ 0.33
TRIM39-201ENST00000376656 DOCK5Q9H7D0 1870 aa17.1■□□□□ 0.33
TRIM39-201ENST00000376656 SF3B1O75533 1304 aaKnown RBP eCLIP17.1■□□□□ 0.33
TRIM39-201ENST00000376656 LRRIQ4A6NIV6 560 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms