RNA–Protein interactions for RNA: ENST00000376567.6

DDR1-224, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-224ENST00000376567 MT-CO1P00395 513 aa12.87□□□□□ -0.35
DDR1-224ENST00000376567 GOT1P17174 413 aa12.87□□□□□ -0.35
DDR1-224ENST00000376567 LMO2P25791 158 aa12.87□□□□□ -0.35
DDR1-224ENST00000376567 SLC8A1P32418 973 aa12.87□□□□□ -0.35
DDR1-224ENST00000376567 SCNN1GP51170 649 aa12.87□□□□□ -0.35
DDR1-224ENST00000376567 NUDCD1Q96RS6 583 aa12.87□□□□□ -0.35
DDR1-224ENST00000376567 ASB7Q9H672 318 aa12.87□□□□□ -0.35
DDR1-224ENST00000376567 SARS2Q9NP81 518 aaKnown RBP12.87□□□□□ -0.35
DDR1-224ENST00000376567 TMEM59LQ9UK28 342 aa12.87□□□□□ -0.35
DDR1-224ENST00000376567 CD4P01730 458 aa12.87□□□□□ -0.35
DDR1-224ENST00000376567 CASP2P42575 452 aa12.87□□□□□ -0.35
DDR1-224ENST00000376567 RTP1P59025 263 aa12.87□□□□□ -0.35
DDR1-224ENST00000376567 RPL10AP62906 217 aaKnown RBP12.87□□□□□ -0.35
DDR1-224ENST00000376567 MFSD10Q14728 455 aa12.87□□□□□ -0.35
DDR1-224ENST00000376567 TFAP2DQ7Z6R9 452 aa12.87□□□□□ -0.35
DDR1-224ENST00000376567 PIGZQ86VD9 579 aa12.87□□□□□ -0.35
DDR1-224ENST00000376567 TFB1MQ8WVM0 346 aaKnown RBP12.87□□□□□ -0.35
DDR1-224ENST00000376567 PIWIL1Q96J94 861 aaKnown RBP12.87□□□□□ -0.35
DDR1-224ENST00000376567 RNF39Q9H2S5 420 aa12.87□□□□□ -0.35
DDR1-224ENST00000376567 ZDHHC18Q9NUE0 388 aa12.87□□□□□ -0.35
DDR1-224ENST00000376567 SLC39A10Q9ULF5 831 aa12.87□□□□□ -0.35
DDR1-224ENST00000376567 WDR27A2RRH5 827 aa12.86□□□□□ -0.35
DDR1-224ENST00000376567 DGKIO75912 1065 aa12.86□□□□□ -0.35
DDR1-224ENST00000376567 SNRPAP09012 282 aaKnown RBP12.86□□□□□ -0.35
DDR1-224ENST00000376567 SMIM10L2AP0DMW4 78 aa12.86□□□□□ -0.35
DDR1-224ENST00000376567 SMIM10L2BP0DMW5 78 aa12.86□□□□□ -0.35
DDR1-224ENST00000376567 DRD4P21917 467 aa12.86□□□□□ -0.35
DDR1-224ENST00000376567 BDNFP23560 247 aa12.86□□□□□ -0.35
DDR1-224ENST00000376567 STIP1P31948 543 aaKnown RBP12.86□□□□□ -0.35
DDR1-224ENST00000376567 KCNJ2P63252 427 aa12.86□□□□□ -0.35
DDR1-224ENST00000376567 ZNF268Q14587 947 aaPredicted RBP12.86□□□□□ -0.35
DDR1-224ENST00000376567 FASTKD1Q53R41 847 aaKnown RBP12.86□□□□□ -0.35
DDR1-224ENST00000376567 ANKRD20A8PQ5CZ79 823 aa12.86□□□□□ -0.35
DDR1-224ENST00000376567 WDR75Q8IWA0 830 aaKnown RBP12.86□□□□□ -0.35
DDR1-224ENST00000376567 CD302Q8IX05 232 aa12.86□□□□□ -0.35
DDR1-224ENST00000376567 COLGALT1Q8NBJ5 622 aa12.86□□□□□ -0.35
DDR1-224ENST00000376567 SLC4A11Q8NBS3 891 aa12.86□□□□□ -0.35
DDR1-224ENST00000376567 DDX1Q92499 740 aaKnown RBP12.86□□□□□ -0.35
DDR1-224ENST00000376567 MECRQ9BV79 373 aa12.86□□□□□ -0.35
DDR1-224ENST00000376567 NIFKQ9BYG3 293 aaKnown RBP12.86□□□□□ -0.35
DDR1-224ENST00000376567 UBXN6Q9BZV1 441 aa12.86□□□□□ -0.35
DDR1-224ENST00000376567 C20orf96Q9NUD7 363 aaPredicted RBP12.86□□□□□ -0.35
DDR1-224ENST00000376567 SMG5Q9UPR3 1016 aaKnown RBP12.86□□□□□ -0.35
DDR1-224ENST00000376567 GRIN2DO15399 1336 aa12.86□□□□□ -0.35
DDR1-224ENST00000376567 RRN3P2A6NIE6 340 aa12.86□□□□□ -0.35
DDR1-224ENST00000376567 TSPAN3O60637 253 aa12.86□□□□□ -0.35
DDR1-224ENST00000376567 GPC4O75487 556 aa12.86□□□□□ -0.35
DDR1-224ENST00000376567 HOXC6P09630 235 aa12.86□□□□□ -0.35
DDR1-224ENST00000376567 NLRP9Q7RTR0 991 aa12.86□□□□□ -0.35
DDR1-224ENST00000376567 STKLD1Q8NE28 680 aa12.86□□□□□ -0.35
DDR1-224ENST00000376567 GPR152Q8TDT2 470 aa12.86□□□□□ -0.35
DDR1-224ENST00000376567 HDAC11Q96DB2 347 aa12.86□□□□□ -0.35
DDR1-224ENST00000376567 STAMBPL1Q96FJ0 436 aa12.86□□□□□ -0.35
DDR1-224ENST00000376567 SEPT5Q99719 369 aaPredicted RBP12.86□□□□□ -0.35
DDR1-224ENST00000376567 MAGEB5Q9BZ81 275 aa12.86□□□□□ -0.35
DDR1-224ENST00000376567 ULBP1Q9BZM6 244 aa12.86□□□□□ -0.35
DDR1-224ENST00000376567 PDZD7Q9H5P4 517 aa12.86□□□□□ -0.35
DDR1-224ENST00000376567 WDCPQ9H6R7 721 aa12.86□□□□□ -0.35
DDR1-224ENST00000376567 TMPRSS4Q9NRS4 437 aa12.86□□□□□ -0.35
DDR1-224ENST00000376567 GTSE1Q9NYZ3 720 aa12.86□□□□□ -0.35
DDR1-224ENST00000376567 BCAT1P54687 386 aa12.86□□□□□ -0.35
DDR1-224ENST00000376567 CCL14Q16627 93 aa12.86□□□□□ -0.35
DDR1-224ENST00000376567 TSNAXIP1Q2TAA8 658 aa12.86□□□□□ -0.35
DDR1-224ENST00000376567 SV2CQ496J9 727 aa12.86□□□□□ -0.35
DDR1-224ENST00000376567 ATG16L1Q676U5 607 aa12.86□□□□□ -0.35
DDR1-224ENST00000376567 BZW1Q7L1Q6 419 aaKnown RBP12.86□□□□□ -0.35
DDR1-224ENST00000376567 SPATA2LQ8IUW3 424 aaPredicted RBP12.86□□□□□ -0.35
DDR1-224ENST00000376567 ZCCHC9Q8N567 271 aaKnown RBP12.86□□□□□ -0.35
DDR1-224ENST00000376567 SKA2Q8WVK7 121 aaPredicted RBP12.86□□□□□ -0.35
DDR1-224ENST00000376567 CDHR5Q9HBB8 845 aa12.86□□□□□ -0.35
DDR1-224ENST00000376567 USH1CQ9Y6N9 552 aa12.86□□□□□ -0.35
DDR1-224ENST00000376567 MYO7AQ13402 2215 aa12.86□□□□□ -0.35
DDR1-224ENST00000376567 SMPD1P17405 629 aa12.85□□□□□ -0.35
DDR1-224ENST00000376567 MGAT1P26572 445 aa12.85□□□□□ -0.35
DDR1-224ENST00000376567 MBTD1Q05BQ5 628 aa12.85□□□□□ -0.35
DDR1-224ENST00000376567 RPS6KA2Q15349 733 aa12.85□□□□□ -0.35
DDR1-224ENST00000376567 ARHGAP24Q8N264 748 aa12.85□□□□□ -0.35
DDR1-224ENST00000376567 ALLCQ8N6M5 410 aa12.85□□□□□ -0.35
DDR1-224ENST00000376567 FBXL18Q96ME1 805 aa12.85□□□□□ -0.35
DDR1-224ENST00000376567 FAM8A1Q9UBU6 413 aa12.85□□□□□ -0.35
DDR1-224ENST00000376567 MYH4Q9Y623 1939 aa12.85□□□□□ -0.35
DDR1-224ENST00000376567 TCRBV7S3A2A0A539 114 aa12.85□□□□□ -0.35
DDR1-224ENST00000376567 TRUB2O95900 331 aaKnown RBP12.85□□□□□ -0.35
DDR1-224ENST00000376567 CYP1A1P04798 512 aaPredicted RBP12.85□□□□□ -0.35
DDR1-224ENST00000376567 THP07101 528 aa12.85□□□□□ -0.35
DDR1-224ENST00000376567 NDUFV1P49821 464 aa12.85□□□□□ -0.35
DDR1-224ENST00000376567 SLC6A3Q01959 620 aa12.85□□□□□ -0.35
DDR1-224ENST00000376567 CA9Q16790 459 aa12.85□□□□□ -0.35
DDR1-224ENST00000376567 FNBP1LQ5T0N5 605 aa12.85□□□□□ -0.35
DDR1-224ENST00000376567 PLPPR4Q7Z2D5 763 aa12.85□□□□□ -0.35
DDR1-224ENST00000376567 THEM5Q8N1Q8 247 aa12.85□□□□□ -0.35
DDR1-224ENST00000376567 GBP7Q8N8V2 638 aaPredicted RBP12.85□□□□□ -0.35
DDR1-224ENST00000376567 SLC17A7Q9P2U7 560 aa12.85□□□□□ -0.35
DDR1-224ENST00000376567 ITGA11Q9UKX5 1188 aa12.85□□□□□ -0.35
DDR1-224ENST00000376567 MYL2P10916 166 aa12.85□□□□□ -0.35
DDR1-224ENST00000376567 COPS2P61201 443 aa12.85□□□□□ -0.35
DDR1-224ENST00000376567 STX3Q13277 289 aa12.85□□□□□ -0.35
DDR1-224ENST00000376567 MMEL1Q495T6 779 aa12.85□□□□□ -0.35
DDR1-224ENST00000376567 TAF1BQ53T94 588 aaPredicted RBP12.85□□□□□ -0.35
DDR1-224ENST00000376567 ZNF618Q5T7W0 954 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms