RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 UBA3Q8TBC4 463 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 RAB3IL1Q8TBN0 382 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 HPDLQ96IR7 371 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 HEXIM2Q96MH2 286 aaKnown RBP11.09□□□□□ -0.63
ABCF1-202ENST00000376545 SRPK1Q96SB4 655 aaKnown RBP11.09□□□□□ -0.63
ABCF1-202ENST00000376545 SLC4A5Q9BY07 1137 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 PCDH18Q9HCL0 1135 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 ARHGEF4Q9NR80 690 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 SMYD2Q9NRG4 433 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 ETNK2Q9NVF9 386 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 GPRC5DQ9NZD1 345 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 SIRPGQ9P1W8 387 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 C2CD2Q9Y426 696 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 A0A0G2JLL6 359 aaPredicted RBP11.09□□□□□ -0.63
ABCF1-202ENST00000376545 SLC15A5A6NIM6 579 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 CAPN14A8MX76 684 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 CXorf49A8MYA2 514 aaPredicted RBP11.09□□□□□ -0.63
ABCF1-202ENST00000376545 NOP56O00567 594 aaKnown RBP11.09□□□□□ -0.63
ABCF1-202ENST00000376545 PRPSAP2O60256 369 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 SNRPAP09012 282 aaKnown RBP11.09□□□□□ -0.63
ABCF1-202ENST00000376545 SERPINB3P29508 390 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 NDST1P52848 882 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 BIRC2Q13490 618 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 STILQ15468 1287 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 TEX44Q53QW1 395 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 EEPD1Q7L9B9 569 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 PRRT2Q7Z6L0 340 aaPredicted RBP11.09□□□□□ -0.63
ABCF1-202ENST00000376545 TMEM110Q86TL2 294 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 NT5DC4Q86YG4 428 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 MAP7D3Q8IWC1 876 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 SPATA33Q96N06 139 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 MPHOSPH6Q99547 160 aaKnown RBP11.09□□□□□ -0.63
ABCF1-202ENST00000376545 ZNF670Q9BS34 389 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 RAB6BQ9NRW1 208 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 TSPAN16Q9UKR8 245 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 IKBKGQ9Y6K9 419 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 A0A0G2JND7 137 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 A6NHS1 94 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 FAM159BA6NKW6 160 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 ENTPD5O75356 428 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 GCATO75600 419 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 LUC7L3O95232 432 aaKnown RBP11.09□□□□□ -0.63
ABCF1-202ENST00000376545 RBL1P28749 1068 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 NAA25Q14CX7 972 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 CES4AQ5XG92 561 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 PRR11Q96HE9 360 aaPredicted RBP11.09□□□□□ -0.63
ABCF1-202ENST00000376545 OXNAD1Q96HP4 312 aaPredicted RBP11.09□□□□□ -0.63
ABCF1-202ENST00000376545 SIGLEC10Q96LC7 697 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 KCNK4Q9NYG8 393 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 HMX2A2RU54 273 aa11.08□□□□□ -0.64
ABCF1-202ENST00000376545 H7C0C1 242 aa11.08□□□□□ -0.64
ABCF1-202ENST00000376545 APOL1O14791 398 aa11.08□□□□□ -0.64
ABCF1-202ENST00000376545 KCNN4O15554 427 aa11.08□□□□□ -0.64
ABCF1-202ENST00000376545 TOMM70O94826 608 aa11.08□□□□□ -0.64
ABCF1-202ENST00000376545 APOEP02649 317 aa11.08□□□□□ -0.64
ABCF1-202ENST00000376545 RARBP10826 455 aa11.08□□□□□ -0.64
ABCF1-202ENST00000376545 TPSB2P20231 275 aa11.08□□□□□ -0.64
ABCF1-202ENST00000376545 ATP6V1C1P21283 382 aa11.08□□□□□ -0.64
ABCF1-202ENST00000376545 PHKA2P46019 1235 aa11.08□□□□□ -0.64
ABCF1-202ENST00000376545 ATP5OP48047 213 aa11.08□□□□□ -0.64
ABCF1-202ENST00000376545 PTDSS1P48651 473 aaKnown RBP11.08□□□□□ -0.64
ABCF1-202ENST00000376545 YWHAGP61981 247 aaKnown RBP eCLIP11.08□□□□□ -0.64
ABCF1-202ENST00000376545 OCRLQ01968 901 aa11.08□□□□□ -0.64
ABCF1-202ENST00000376545 TPSAB1Q15661 275 aa11.08□□□□□ -0.64
ABCF1-202ENST00000376545 KHDC1Q4VXA5 237 aaKnown RBP11.08□□□□□ -0.64
ABCF1-202ENST00000376545 ZNF484Q5JVG2 852 aa11.08□□□□□ -0.64
ABCF1-202ENST00000376545 RFWD3Q6PCD5 774 aa11.08□□□□□ -0.64
ABCF1-202ENST00000376545 C1orf228Q6PIY5 440 aa11.08□□□□□ -0.64
ABCF1-202ENST00000376545 TIFABQ6ZNK6 161 aa11.08□□□□□ -0.64
ABCF1-202ENST00000376545 RINLQ6ZS11 566 aa11.08□□□□□ -0.64
ABCF1-202ENST00000376545 ZBTB10Q96DT7 871 aa11.08□□□□□ -0.64
ABCF1-202ENST00000376545 MTBPQ96DY7 904 aa11.08□□□□□ -0.64
ABCF1-202ENST00000376545 RNPEPQ9H4A4 650 aa11.08□□□□□ -0.64
ABCF1-202ENST00000376545 ALG13Q9NP73 1137 aaKnown RBP11.08□□□□□ -0.64
ABCF1-202ENST00000376545 TAS2R1Q9NYW7 299 aa11.08□□□□□ -0.64
ABCF1-202ENST00000376545 CORO1CQ9ULV4 474 aaPredicted RBP11.08□□□□□ -0.64
ABCF1-202ENST00000376545 PDCD11Q14690 1871 aaKnown RBP11.08□□□□□ -0.64
ABCF1-202ENST00000376545 TRIM49D1C9J1S8 452 aa11.08□□□□□ -0.64
ABCF1-202ENST00000376545 COPEO14579 308 aa11.08□□□□□ -0.64
ABCF1-202ENST00000376545 SNNO75324 88 aaPredicted RBP11.08□□□□□ -0.64
ABCF1-202ENST00000376545 GABBR2O75899 941 aa11.08□□□□□ -0.64
ABCF1-202ENST00000376545 KRT37O76014 449 aa11.08□□□□□ -0.64
ABCF1-202ENST00000376545 ATP5BP06576 529 aaKnown RBP11.08□□□□□ -0.64
ABCF1-202ENST00000376545 OSBPP22059 807 aa11.08□□□□□ -0.64
ABCF1-202ENST00000376545 RPL34P49207 117 aaKnown RBP11.08□□□□□ -0.64
ABCF1-202ENST00000376545 TMEM132DQ14C87 1099 aa11.08□□□□□ -0.64
ABCF1-202ENST00000376545 TAF11Q15544 211 aa11.08□□□□□ -0.64
ABCF1-202ENST00000376545 ARCQ7LC44 396 aa11.08□□□□□ -0.64
ABCF1-202ENST00000376545 TRIM42Q8IWZ5 723 aa11.08□□□□□ -0.64
ABCF1-202ENST00000376545 KIRREL3Q8IZU9 778 aa11.08□□□□□ -0.64
ABCF1-202ENST00000376545 SLC35F5Q8WV83 523 aa11.08□□□□□ -0.64
ABCF1-202ENST00000376545 CENPIQ92674 756 aaPredicted RBP11.08□□□□□ -0.64
ABCF1-202ENST00000376545 ZNF668Q96K58 619 aaPredicted RBP11.08□□□□□ -0.64
ABCF1-202ENST00000376545 NT5C1AQ9BXI3 368 aa11.08□□□□□ -0.64
ABCF1-202ENST00000376545 KLC2Q9H0B6 622 aa11.08□□□□□ -0.64
ABCF1-202ENST00000376545 FBXO6Q9NRD1 293 aaPredicted RBP11.08□□□□□ -0.64
ABCF1-202ENST00000376545 ZC3H7BQ9UGR2 993 aaKnown RBP11.08□□□□□ -0.64
ABCF1-202ENST00000376545 SETSIPP0DME0 302 aa11.07□□□□□ -0.64
ABCF1-202ENST00000376545 ACADSP16219 412 aa11.07□□□□□ -0.64
ABCF1-202ENST00000376545 RBP5P82980 135 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms