RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 GSTCDQ8NEC7 633 aa14.91□□□□□ -0.02
TNFRSF1B-201ENST00000376259 TMA16Q96EY4 203 aaKnown RBP14.91□□□□□ -0.02
TNFRSF1B-201ENST00000376259 CXorf49A8MYA2 514 aaPredicted RBP14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 GSC2O15499 205 aa14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 MAFGO15525 162 aa14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 DCXO43602 365 aa14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 C6orf222P0C671 652 aaPredicted RBP14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 ZNF286BP0CG31 522 aa14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 ERVK-10P10266 1014 aa14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 SLC12A2P55011 1212 aa14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 CYTH1Q15438 398 aa14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 TMCO4Q5TGY1 634 aa14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 ABHD15Q6UXT9 468 aa14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 USP13Q92995 863 aaPredicted RBP14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 APOPT1Q96IL0 206 aa14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 VCPIP1Q96JH7 1222 aa14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 LGMNQ99538 433 aa14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 HAPLN2Q9GZV7 340 aa14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 TAS2R1Q9NYW7 299 aa14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 TLK1Q9UKI8 766 aa14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 ACAT1P24752 427 aaKnown RBP14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 GBE1Q04446 702 aa14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 RIPK1Q13546 671 aa14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 SURF1Q15526 300 aa14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 PLEKHG4Q58EX7 1191 aa14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 SH2D4BQ5SQS7 431 aa14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 KCNT2Q6UVM3 1135 aa14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 MOB2Q70IA6 237 aa14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 NIPA1Q7RTP0 329 aa14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 SPATA24Q86W54 205 aa14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 CCNJLQ8IV13 435 aa14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 C10orf82Q8WW14 230 aa14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 PIWIL1Q96J94 861 aaKnown RBP14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 MARK4Q96L34 752 aa14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 EBF4Q9BQW3 602 aa14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 TUBB6Q9BUF5 446 aa14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 LRMDAQ9H2I8 198 aa14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 PAPOLBQ9NRJ5 636 aaKnown RBP14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 PSMG1O95456 288 aa14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 SRGAP2BP0DMP2 458 aa14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 ACO1P21399 889 aaKnown RBP14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 BAG6P46379 1132 aa14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 MRPS35P82673 323 aaKnown RBP14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 MPZL3Q6UWV2 235 aa14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 CMC1Q7Z7K0 106 aa14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 MOCOSQ96EN8 888 aa14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 L3MBTL3Q96JM7 780 aaPredicted RBP14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 MRIQ9BWK5 157 aa14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 ADA2Q9NZK5 511 aa14.9□□□□□ -0.02
TNFRSF1B-201ENST00000376259 APOC4-APOC2K7ER74 178 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 STAMBPO95630 424 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 APOC2P02655 101 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 PTPRAP18433 802 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 MGAT1P26572 445 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 STIP1P31948 543 aaKnown RBP14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 CACNB2Q08289 660 aaPredicted RBP14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 KLF1Q13351 362 aaPredicted RBP14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 PPM1JQ5JR12 505 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 AEBP2Q6ZN18 517 aaPredicted RBP14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 C4orf50Q6ZRC1 276 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 FAM83AQ86UY5 434 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 DEFB107AQ8IZN7 70 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 RBM15BQ8NDT2 890 aaKnown RBP14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 OLIG1Q8TAK6 271 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 SLC5A4Q9NY91 659 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 GTSE1Q9NYZ3 720 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 C2CD2Q9Y426 696 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 C2CD2LO14523 706 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 LYPLA2O95372 231 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 RARBP10826 455 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 AKAP5P24588 427 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 CYP2F1P24903 491 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 HMGB2P26583 209 aaKnown RBP14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 PGGT1BP53609 377 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 SLC34A1Q06495 639 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 ART3Q13508 389 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 PPP1R2P3Q6NXS1 205 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 FAM183BPQ6ZVS7 135 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 SIX6OS1Q8N1H7 587 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 UTP4Q969X6 686 aaKnown RBP14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 PLA2G4CQ9UP65 541 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 AFG3L2Q9Y4W6 797 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 TBX10O75333 385 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 ITGAVP06756 1048 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 USP4Q13107 963 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 MXD4Q14582 209 aaPredicted RBP14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 TMEM63BQ5T3F8 832 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 IER5Q5VY09 327 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 IYDQ6PHW0 289 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 CDHR3Q6ZTQ4 885 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 BBS12Q6ZW61 710 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 PTAR1Q7Z6K3 402 aaPredicted RBP14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 TEX2Q8IWB9 1127 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 SPATA6LQ8N4H0 392 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 ABTB1Q969K4 478 aaPredicted RBP14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 NMD3Q96D46 503 aaKnown RBP14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 CNPY3Q9BT09 278 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 EBF2Q9HAK2 575 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 XAB2Q9HCS7 855 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms