RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 NCK2O43639 380 aa23.98■■□□□ 1.43
HLA-C-202ENST00000376237 BUB1BO60566 1050 aaPredicted RBP23.98■■□□□ 1.43
HLA-C-202ENST00000376237 RFPL2O75678 378 aa23.98■■□□□ 1.43
HLA-C-202ENST00000376237 FGF19O95750 216 aa23.98■■□□□ 1.43
HLA-C-202ENST00000376237 NCAM1P13591 858 aa23.98■■□□□ 1.43
HLA-C-202ENST00000376237 PTPN2P17706 415 aa23.98■■□□□ 1.43
HLA-C-202ENST00000376237 SLC1A1P43005 524 aa23.98■■□□□ 1.43
HLA-C-202ENST00000376237 PTPN9P43378 593 aa23.98■■□□□ 1.43
HLA-C-202ENST00000376237 MESDQ14696 234 aa23.98■■□□□ 1.43
HLA-C-202ENST00000376237 DCAF6Q58WW2 860 aa23.98■■□□□ 1.43
HLA-C-202ENST00000376237 HFE2Q6ZVN8 426 aa23.98■■□□□ 1.43
HLA-C-202ENST00000376237 DAAM2Q86T65 1068 aa23.98■■□□□ 1.43
HLA-C-202ENST00000376237 ZNF276Q8N554 614 aa23.98■■□□□ 1.43
HLA-C-202ENST00000376237 NIPA2Q8N8Q9 360 aa23.98■■□□□ 1.43
HLA-C-202ENST00000376237 CMASQ8NFW8 434 aaPredicted RBP23.98■■□□□ 1.43
HLA-C-202ENST00000376237 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.98■■□□□ 1.43
HLA-C-202ENST00000376237 LRCH3Q96II8 777 aa23.98■■□□□ 1.43
HLA-C-202ENST00000376237 CDK5RAP1Q96SZ6 601 aaKnown RBP23.98■■□□□ 1.43
HLA-C-202ENST00000376237 NCAPGQ9BPX3 1015 aa23.98■■□□□ 1.43
HLA-C-202ENST00000376237 TRIM7Q9C029 511 aa23.98■■□□□ 1.43
HLA-C-202ENST00000376237 IGFLR1Q9H665 355 aa23.98■■□□□ 1.43
HLA-C-202ENST00000376237 SFXN1Q9H9B4 322 aa23.98■■□□□ 1.43
HLA-C-202ENST00000376237 TMEM51Q9NW97 253 aa23.98■■□□□ 1.43
HLA-C-202ENST00000376237 CAPN6Q9Y6Q1 641 aa23.98■■□□□ 1.43
HLA-C-202ENST00000376237 CCDC195A0A1B0GUA6 201 aa23.97■■□□□ 1.43
HLA-C-202ENST00000376237 PROSCO94903 275 aa23.97■■□□□ 1.43
HLA-C-202ENST00000376237 TUBB4AP04350 444 aa23.97■■□□□ 1.43
HLA-C-202ENST00000376237 FYNP06241 537 aa23.97■■□□□ 1.43
HLA-C-202ENST00000376237 RALAP11233 206 aa23.97■■□□□ 1.43
HLA-C-202ENST00000376237 PSMA2P25787 234 aa23.97■■□□□ 1.43
HLA-C-202ENST00000376237 MAN1A1P33908 653 aa23.97■■□□□ 1.43
HLA-C-202ENST00000376237 SLC25A52Q3SY17 297 aa23.97■■□□□ 1.43
HLA-C-202ENST00000376237 RNF139Q8WU17 664 aa23.97■■□□□ 1.43
HLA-C-202ENST00000376237 GAS2L1Q99501 681 aaPredicted RBP23.97■■□□□ 1.43
HLA-C-202ENST00000376237 NMUR1Q9HB89 426 aa23.97■■□□□ 1.43
HLA-C-202ENST00000376237 ASAH2Q9NR71 780 aa23.97■■□□□ 1.43
HLA-C-202ENST00000376237 MYO7AQ13402 2215 aa23.97■■□□□ 1.43
HLA-C-202ENST00000376237 MTCL1Q9Y4B5 1905 aaKnown RBP23.97■■□□□ 1.43
HLA-C-202ENST00000376237 GRID2IPA4D2P6 1211 aa23.96■■□□□ 1.43
HLA-C-202ENST00000376237 PALMO75781 387 aa23.96■■□□□ 1.43
HLA-C-202ENST00000376237 GTF2F1P35269 517 aaKnown RBP eCLIP23.96■■□□□ 1.43
HLA-C-202ENST00000376237 OGDHQ02218 1023 aa23.96■■□□□ 1.43
HLA-C-202ENST00000376237 SLFN11Q7Z7L1 901 aa23.96■■□□□ 1.43
HLA-C-202ENST00000376237 TADA2BQ86TJ2 420 aa23.96■■□□□ 1.43
HLA-C-202ENST00000376237 LRRC57Q8N9N7 239 aa23.96■■□□□ 1.43
HLA-C-202ENST00000376237 VN1R2Q8NFZ6 395 aa23.96■■□□□ 1.43
HLA-C-202ENST00000376237 NT5C3BQ969T7 300 aa23.96■■□□□ 1.43
HLA-C-202ENST00000376237 BTBD6Q96KE9 485 aa23.96■■□□□ 1.43
HLA-C-202ENST00000376237 LRRC3Q9BY71 257 aa23.96■■□□□ 1.43
HLA-C-202ENST00000376237 IRX2Q9BZI1 471 aaPredicted RBP23.96■■□□□ 1.43
HLA-C-202ENST00000376237 OLA1Q9NTK5 396 aaKnown RBP23.96■■□□□ 1.43
HLA-C-202ENST00000376237 NAALADL1Q9UQQ1 740 aa23.96■■□□□ 1.43
HLA-C-202ENST00000376237 ZNF840PA6NDX5 716 aa23.95■■□□□ 1.43
HLA-C-202ENST00000376237 RNF8O76064 485 aa23.95■■□□□ 1.43
HLA-C-202ENST00000376237 F11P03951 625 aa23.95■■□□□ 1.43
HLA-C-202ENST00000376237 CDC25CP30307 473 aa23.95■■□□□ 1.43
HLA-C-202ENST00000376237 EPHA5P54756 1037 aa23.95■■□□□ 1.43
HLA-C-202ENST00000376237 CCDC14Q49A88 953 aa23.95■■□□□ 1.43
HLA-C-202ENST00000376237 ZNF569Q5MCW4 686 aa23.95■■□□□ 1.43
HLA-C-202ENST00000376237 TRNP1Q6NT89 227 aa23.95■■□□□ 1.43
HLA-C-202ENST00000376237 TMC8Q8IU68 726 aa23.95■■□□□ 1.43
HLA-C-202ENST00000376237 EDEM1Q92611 657 aa23.95■■□□□ 1.43
HLA-C-202ENST00000376237 CFAP57Q96MR6 1250 aa23.95■■□□□ 1.43
HLA-C-202ENST00000376237 NPY6RQ99463 290 aa23.95■■□□□ 1.43
HLA-C-202ENST00000376237 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.95■■□□□ 1.43
HLA-C-202ENST00000376237 ALG6Q9Y672 507 aa23.95■■□□□ 1.43
HLA-C-202ENST00000376237 ZNF500O60304 480 aaPredicted RBP23.94■■□□□ 1.42
HLA-C-202ENST00000376237 RARGP13631 454 aa23.94■■□□□ 1.42
HLA-C-202ENST00000376237 HOXB8P17481 243 aaPredicted RBP23.94■■□□□ 1.42
HLA-C-202ENST00000376237 TUBP50607 506 aa23.94■■□□□ 1.42
HLA-C-202ENST00000376237 GNG11P61952 73 aa23.94■■□□□ 1.42
HLA-C-202ENST00000376237 ZNF252P-AS1Q0IIN9 211 aa23.94■■□□□ 1.42
HLA-C-202ENST00000376237 ADAM15Q13444 863 aa23.94■■□□□ 1.42
HLA-C-202ENST00000376237 ADGRE1Q14246 886 aa23.94■■□□□ 1.42
HLA-C-202ENST00000376237 SYPL2Q5VXT5 272 aa23.94■■□□□ 1.42
HLA-C-202ENST00000376237 NYAP1Q6ZVC0 841 aa23.94■■□□□ 1.42
HLA-C-202ENST00000376237 RSRC2Q7L4I2 434 aaKnown RBP23.94■■□□□ 1.42
HLA-C-202ENST00000376237 STRADAQ7RTN6 431 aa23.94■■□□□ 1.42
HLA-C-202ENST00000376237 GCNAQ96QF7 691 aa23.94■■□□□ 1.42
HLA-C-202ENST00000376237 CORO1BQ9BR76 489 aa23.94■■□□□ 1.42
HLA-C-202ENST00000376237 IL21Q9HBE4 155 aa23.94■■□□□ 1.42
HLA-C-202ENST00000376237 OSER1Q9NX31 292 aa23.94■■□□□ 1.42
HLA-C-202ENST00000376237 TRANK1O15050 2925 aa23.94■■□□□ 1.42
HLA-C-202ENST00000376237 ATG2AQ2TAZ0 1938 aa23.94■■□□□ 1.42
HLA-C-202ENST00000376237 GREB1Q4ZG55 1949 aa23.94■■□□□ 1.42
HLA-C-202ENST00000376237 KIF2AO00139 706 aaPredicted RBP23.94■■□□□ 1.42
HLA-C-202ENST00000376237 F9P00740 461 aa23.94■■□□□ 1.42
HLA-C-202ENST00000376237 IGFBP4P22692 258 aa23.94■■□□□ 1.42
HLA-C-202ENST00000376237 GABRR2P28476 465 aa23.94■■□□□ 1.42
HLA-C-202ENST00000376237 PGFP49763 221 aa23.94■■□□□ 1.42
HLA-C-202ENST00000376237 RBM10P98175 930 aaKnown RBP23.94■■□□□ 1.42
HLA-C-202ENST00000376237 CENPIQ92674 756 aaPredicted RBP23.94■■□□□ 1.42
HLA-C-202ENST00000376237 ZNF707Q96C28 371 aaPredicted RBP23.94■■□□□ 1.42
HLA-C-202ENST00000376237 PGAP3Q96FM1 320 aaPredicted RBP23.94■■□□□ 1.42
HLA-C-202ENST00000376237 PIDD1Q9HB75 910 aa23.94■■□□□ 1.42
HLA-C-202ENST00000376237 ZNF334Q9HCZ1 680 aaPredicted RBP23.94■■□□□ 1.42
HLA-C-202ENST00000376237 TMEM110-MUSTN1A8MSY1 372 aa23.93■■□□□ 1.42
HLA-C-202ENST00000376237 ENDOD1O94919 500 aa23.93■■□□□ 1.42
HLA-C-202ENST00000376237 GLP2RO95838 553 aa23.93■■□□□ 1.42
HLA-C-202ENST00000376237 SULT1E1P49888 294 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms