RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 PFDN1O60925 122 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 PPP1R11O60927 126 aaPredicted RBP14.07□□□□□ -0.16
C9orf47-203ENST00000375851 SUPT7LO94864 414 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 CALCAP01258 141 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 ALDH2P05091 517 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 ELK3P41970 407 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 ATXN3P54252 364 aaPredicted RBP14.07□□□□□ -0.16
C9orf47-203ENST00000375851 ATN1P54259 1190 aaPredicted RBP14.07□□□□□ -0.16
C9orf47-203ENST00000375851 CORO7P57737 925 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 APOL5Q9BWW9 433 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 SHCBP1LQ9BZQ2 653 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 RRAGCQ9HB90 399 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 CHST7Q9NS84 486 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 IARS2Q9NSE4 1012 aaKnown RBP14.07□□□□□ -0.16
C9orf47-203ENST00000375851 CNTNAP2Q9UHC6 1331 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 C2orf81A6NN90 581 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 DGKIO75912 1065 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 INPP5AQ14642 412 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 ARSHQ5FYA8 562 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 STRA8Q7Z7C7 330 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 SETD3Q86TU7 594 aaPredicted RBP14.07□□□□□ -0.16
C9orf47-203ENST00000375851 FAM71AQ8IYT1 594 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 DEFB106AQ8N104 65 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 RFWD2Q8NHY2 731 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 CEP41Q9BYV8 373 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 AAASQ9NRG9 546 aa14.07□□□□□ -0.16
C9orf47-203ENST00000375851 C3P01024 1663 aa14.06□□□□□ -0.16
C9orf47-203ENST00000375851 ASS1P00966 412 aaKnown RBP14.06□□□□□ -0.16
C9orf47-203ENST00000375851 AMPD1P23109 780 aa14.06□□□□□ -0.16
C9orf47-203ENST00000375851 BMPR2Q13873 1038 aa14.06□□□□□ -0.16
C9orf47-203ENST00000375851 C16orf89Q6UX73 402 aa14.06□□□□□ -0.16
C9orf47-203ENST00000375851 SHC3Q92529 594 aa14.06□□□□□ -0.16
C9orf47-203ENST00000375851 MRPS31Q92665 395 aaKnown RBP14.06□□□□□ -0.16
C9orf47-203ENST00000375851 CELF6Q96J87 481 aaKnown RBP14.06□□□□□ -0.16
C9orf47-203ENST00000375851 TINF2Q9BSI4 451 aa14.06□□□□□ -0.16
C9orf47-203ENST00000375851 RBM22Q9NW64 420 aaKnown RBP eCLIP14.06□□□□□ -0.16
C9orf47-203ENST00000375851 NFASCO94856 1347 aa14.06□□□□□ -0.16
C9orf47-203ENST00000375851 ADGRA2Q96PE1 1338 aa14.06□□□□□ -0.16
C9orf47-203ENST00000375851 TCN1P20061 433 aaPredicted RBP14.06□□□□□ -0.16
C9orf47-203ENST00000375851 CCR1P32246 355 aa14.06□□□□□ -0.16
C9orf47-203ENST00000375851 AVPR1AP37288 418 aa14.06□□□□□ -0.16
C9orf47-203ENST00000375851 RAB27AP51159 221 aa14.06□□□□□ -0.16
C9orf47-203ENST00000375851 SLC6A3Q01959 620 aa14.06□□□□□ -0.16
C9orf47-203ENST00000375851 CNGA3Q16281 694 aa14.06□□□□□ -0.16
C9orf47-203ENST00000375851 FSCN1Q16658 493 aaKnown RBP14.06□□□□□ -0.16
C9orf47-203ENST00000375851 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.06□□□□□ -0.16
C9orf47-203ENST00000375851 IRF2BP1Q8IU81 584 aa14.06□□□□□ -0.16
C9orf47-203ENST00000375851 AENQ8WTP8 325 aaKnown RBP14.06□□□□□ -0.16
C9orf47-203ENST00000375851 RNF19AQ9NV58 838 aa14.06□□□□□ -0.16
C9orf47-203ENST00000375851 PKD2L2Q9NZM6 624 aa14.06□□□□□ -0.16
C9orf47-203ENST00000375851 PRPF4O43172 522 aaKnown RBP eCLIP14.06□□□□□ -0.16
C9orf47-203ENST00000375851 MBL2P11226 248 aaPredicted RBP14.06□□□□□ -0.16
C9orf47-203ENST00000375851 TARSP26639 723 aaKnown RBP14.06□□□□□ -0.16
C9orf47-203ENST00000375851 GLRBP48167 497 aa14.06□□□□□ -0.16
C9orf47-203ENST00000375851 SERPINB8P50452 374 aa14.06□□□□□ -0.16
C9orf47-203ENST00000375851 ITGB3BPQ13352 177 aaPredicted RBP14.06□□□□□ -0.16
C9orf47-203ENST00000375851 MPP3Q13368 585 aa14.06□□□□□ -0.16
C9orf47-203ENST00000375851 HYIQ5T013 277 aa14.06□□□□□ -0.16
C9orf47-203ENST00000375851 POTEAQ6S8J7 498 aa14.06□□□□□ -0.16
C9orf47-203ENST00000375851 LAYNQ6UX15 382 aa14.06□□□□□ -0.16
C9orf47-203ENST00000375851 UNC45BQ8IWX7 931 aa14.06□□□□□ -0.16
C9orf47-203ENST00000375851 KIAA0319LQ8IZA0 1049 aa14.06□□□□□ -0.16
C9orf47-203ENST00000375851 HS6ST3Q8IZP7 471 aa14.06□□□□□ -0.16
C9orf47-203ENST00000375851 SLC40A1Q9NP59 571 aa14.06□□□□□ -0.16
C9orf47-203ENST00000375851 XPNPEP3Q9NQH7 507 aa14.06□□□□□ -0.16
C9orf47-203ENST00000375851 TNFSF13BQ9Y275 285 aa14.06□□□□□ -0.16
C9orf47-203ENST00000375851 SPATA31C2B4DYI2 1134 aa14.06□□□□□ -0.16
C9orf47-203ENST00000375851 SOAT2O75908 522 aa14.06□□□□□ -0.16
C9orf47-203ENST00000375851 SSTR1P30872 391 aa14.06□□□□□ -0.16
C9orf47-203ENST00000375851 BEX3Q00994 111 aa14.06□□□□□ -0.16
C9orf47-203ENST00000375851 ELAVL2Q12926 359 aaKnown RBP14.06□□□□□ -0.16
C9orf47-203ENST00000375851 CAPSQ13938 189 aa14.06□□□□□ -0.16
C9orf47-203ENST00000375851 PTK2BQ14289 1009 aa14.06□□□□□ -0.16
C9orf47-203ENST00000375851 CATSPER1Q8NEC5 780 aa14.06□□□□□ -0.16
C9orf47-203ENST00000375851 LNX1Q8TBB1 728 aaPredicted RBP14.06□□□□□ -0.16
C9orf47-203ENST00000375851 UBE2OQ9C0C9 1292 aaKnown RBP14.06□□□□□ -0.16
C9orf47-203ENST00000375851 BCL9LQ86UU0 1499 aa14.05□□□□□ -0.16
C9orf47-203ENST00000375851 MAFO75444 373 aaPredicted RBP14.05□□□□□ -0.16
C9orf47-203ENST00000375851 SASH3O75995 380 aa14.05□□□□□ -0.16
C9orf47-203ENST00000375851 OXCT1P55809 520 aa14.05□□□□□ -0.16
C9orf47-203ENST00000375851 MGAT5Q09328 741 aa14.05□□□□□ -0.16
C9orf47-203ENST00000375851 BMT2Q1RMZ1 405 aa14.05□□□□□ -0.16
C9orf47-203ENST00000375851 RAB42Q8N4Z0 105 aa14.05□□□□□ -0.16
C9orf47-203ENST00000375851 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.05□□□□□ -0.16
C9orf47-203ENST00000375851 ADAM32Q8TC27 787 aa14.05□□□□□ -0.16
C9orf47-203ENST00000375851 GAD1Q99259 594 aa14.05□□□□□ -0.16
C9orf47-203ENST00000375851 FICDQ9BVA6 458 aa14.05□□□□□ -0.16
C9orf47-203ENST00000375851 YIPF3Q9GZM5 350 aa14.05□□□□□ -0.16
C9orf47-203ENST00000375851 NT5MQ9NPB1 228 aa14.05□□□□□ -0.16
C9orf47-203ENST00000375851 GDF3Q9NR23 364 aa14.05□□□□□ -0.16
C9orf47-203ENST00000375851 RRN3Q9NYV6 651 aa14.05□□□□□ -0.16
C9orf47-203ENST00000375851 TRMT6Q9UJA5 497 aaKnown RBP14.05□□□□□ -0.16
C9orf47-203ENST00000375851 KCNK1O00180 336 aa14.05□□□□□ -0.16
C9orf47-203ENST00000375851 ENDOD1O94919 500 aa14.05□□□□□ -0.16
C9orf47-203ENST00000375851 EGFRP00533 1210 aa14.05□□□□□ -0.16
C9orf47-203ENST00000375851 CCND1P24385 295 aa14.05□□□□□ -0.16
C9orf47-203ENST00000375851 HNRNPH3P31942 346 aaKnown RBP14.05□□□□□ -0.16
C9orf47-203ENST00000375851 POU4F1Q01851 419 aa14.05□□□□□ -0.16
C9orf47-203ENST00000375851 ZNF844Q08AG5 666 aa14.05□□□□□ -0.16
C9orf47-203ENST00000375851 ACAP1Q15027 740 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms