RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 RLN3Q8WXF3 142 aa24.52■■□□□ 1.52
C9orf47-202ENST00000375850 KCTD10Q9H3F6 313 aa24.52■■□□□ 1.52
C9orf47-202ENST00000375850 MARK1Q9P0L2 795 aa24.52■■□□□ 1.52
C9orf47-202ENST00000375850 RCOR1Q9UKL0 485 aa24.52■■□□□ 1.52
C9orf47-202ENST00000375850 SCML2Q9UQR0 700 aa24.52■■□□□ 1.52
C9orf47-202ENST00000375850 PCDHA5Q9Y5H7 936 aa24.52■■□□□ 1.52
C9orf47-202ENST00000375850 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.51■■□□□ 1.51
C9orf47-202ENST00000375850 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa24.51■■□□□ 1.51
C9orf47-202ENST00000375850 ZNF217O75362 1048 aa24.51■■□□□ 1.51
C9orf47-202ENST00000375850 NR3C1P04150 777 aa24.51■■□□□ 1.51
C9orf47-202ENST00000375850 PROS1P07225 676 aa24.51■■□□□ 1.51
C9orf47-202ENST00000375850 CCDC130P13994 396 aa24.51■■□□□ 1.51
C9orf47-202ENST00000375850 MAP3K7CLP57077 242 aa24.51■■□□□ 1.51
C9orf47-202ENST00000375850 ENPEPQ07075 957 aa24.51■■□□□ 1.51
C9orf47-202ENST00000375850 SV2AQ7L0J3 742 aa24.51■■□□□ 1.51
C9orf47-202ENST00000375850 TMEM25Q86YD3 366 aa24.51■■□□□ 1.51
C9orf47-202ENST00000375850 TMEFF1Q8IYR6 380 aa24.51■■□□□ 1.51
C9orf47-202ENST00000375850 PAGE5Q96GU1 130 aa24.51■■□□□ 1.51
C9orf47-202ENST00000375850 HNRNPABQ99729 332 aaKnown RBP24.51■■□□□ 1.51
C9orf47-202ENST00000375850 SLC32A1Q9H598 525 aa24.51■■□□□ 1.51
C9orf47-202ENST00000375850 CYP3A43Q9HB55 503 aa24.51■■□□□ 1.51
C9orf47-202ENST00000375850 SERTAD1Q9UHV2 236 aa24.51■■□□□ 1.51
C9orf47-202ENST00000375850 ACTN4O43707 911 aaKnown RBP24.5■■□□□ 1.51
C9orf47-202ENST00000375850 CALUO43852 315 aaPredicted RBP24.5■■□□□ 1.51
C9orf47-202ENST00000375850 CACNG3O60359 315 aa24.5■■□□□ 1.51
C9orf47-202ENST00000375850 HOXB2P14652 356 aa24.5■■□□□ 1.51
C9orf47-202ENST00000375850 PSEN1P49768 467 aa24.5■■□□□ 1.51
C9orf47-202ENST00000375850 INCA1Q0VD86 236 aa24.5■■□□□ 1.51
C9orf47-202ENST00000375850 KMT5BQ4FZB7 885 aa24.5■■□□□ 1.51
C9orf47-202ENST00000375850 FOXD4L5Q5VV16 416 aaPredicted RBP24.5■■□□□ 1.51
C9orf47-202ENST00000375850 TADA2BQ86TJ2 420 aa24.5■■□□□ 1.51
C9orf47-202ENST00000375850 HSCBQ8IWL3 235 aa24.5■■□□□ 1.51
C9orf47-202ENST00000375850 FOXD4L4Q8WXT5 416 aaPredicted RBP24.5■■□□□ 1.51
C9orf47-202ENST00000375850 KLF16Q9BXK1 252 aaPredicted RBP24.5■■□□□ 1.51
C9orf47-202ENST00000375850 MBD1Q9UIS9 605 aaPredicted RBP24.5■■□□□ 1.51
C9orf47-202ENST00000375850 PILRBQ9UKJ0 227 aa24.5■■□□□ 1.51
C9orf47-202ENST00000375850 ABCA7Q8IZY2 2146 aa24.5■■□□□ 1.51
C9orf47-202ENST00000375850 IRF1P10914 325 aa24.49■■□□□ 1.51
C9orf47-202ENST00000375850 PIK3CAP42336 1068 aa24.49■■□□□ 1.51
C9orf47-202ENST00000375850 PTGER3P43115 390 aa24.49■■□□□ 1.51
C9orf47-202ENST00000375850 ASPAP45381 313 aa24.49■■□□□ 1.51
C9orf47-202ENST00000375850 DLG4P78352 724 aa24.49■■□□□ 1.51
C9orf47-202ENST00000375850 DUOXA1Q1HG43 343 aa24.49■■□□□ 1.51
C9orf47-202ENST00000375850 FOXD4L6Q3SYB3 417 aaPredicted RBP24.49■■□□□ 1.51
C9orf47-202ENST00000375850 FOXD4L3Q6VB84 417 aaPredicted RBP24.49■■□□□ 1.51
C9orf47-202ENST00000375850 GRAMD1CQ8IYS0 662 aa24.49■■□□□ 1.51
C9orf47-202ENST00000375850 CCDC47Q96A33 483 aaKnown RBP24.49■■□□□ 1.51
C9orf47-202ENST00000375850 BBS2Q9BXC9 721 aa24.49■■□□□ 1.51
C9orf47-202ENST00000375850 NT5C1AQ9BXI3 368 aa24.49■■□□□ 1.51
C9orf47-202ENST00000375850 DNAJC17Q9NVM6 304 aaKnown RBP24.49■■□□□ 1.51
C9orf47-202ENST00000375850 TRAF3IP3Q9Y228 551 aa24.49■■□□□ 1.51
C9orf47-202ENST00000375850 NUP205Q92621 2012 aa24.49■■□□□ 1.51
C9orf47-202ENST00000375850 UPK3BL1B0FP48 263 aa24.48■■□□□ 1.51
C9orf47-202ENST00000375850 UPK3BL2E5RIL1 263 aa24.48■■□□□ 1.51
C9orf47-202ENST00000375850 GREM1O60565 184 aa24.48■■□□□ 1.51
C9orf47-202ENST00000375850 BEST1O76090 585 aa24.48■■□□□ 1.51
C9orf47-202ENST00000375850 PLA2G4AP47712 749 aa24.48■■□□□ 1.51
C9orf47-202ENST00000375850 RPL6Q02878 288 aaKnown RBP24.48■■□□□ 1.51
C9orf47-202ENST00000375850 NFIL3Q16649 462 aa24.48■■□□□ 1.51
C9orf47-202ENST00000375850 CEP135Q66GS9 1140 aa24.48■■□□□ 1.51
C9orf47-202ENST00000375850 THADAQ6YHU6 1953 aa24.48■■□□□ 1.51
C9orf47-202ENST00000375850 ZNF276Q8N554 614 aa24.48■■□□□ 1.51
C9orf47-202ENST00000375850 CDK5RAP1Q96SZ6 601 aaKnown RBP24.48■■□□□ 1.51
C9orf47-202ENST00000375850 FAM49BQ9NUQ9 324 aa24.48■■□□□ 1.51
C9orf47-202ENST00000375850 SLC6A14Q9UN76 642 aa24.48■■□□□ 1.51
C9orf47-202ENST00000375850 LAMA1P25391 3075 aa24.48■■□□□ 1.51
C9orf47-202ENST00000375850 USP24Q9UPU5 2620 aa24.48■■□□□ 1.51
C9orf47-202ENST00000375850 GFRA2O00451 464 aa24.47■■□□□ 1.51
C9orf47-202ENST00000375850 GIPC1O14908 333 aa24.47■■□□□ 1.51
C9orf47-202ENST00000375850 HLA-DRAP01903 254 aa24.47■■□□□ 1.51
C9orf47-202ENST00000375850 TYRP14679 529 aa24.47■■□□□ 1.51
C9orf47-202ENST00000375850 ENGP17813 658 aa24.47■■□□□ 1.51
C9orf47-202ENST00000375850 GABRG2P18507 467 aa24.47■■□□□ 1.51
C9orf47-202ENST00000375850 ATXN3P54252 364 aaPredicted RBP24.47■■□□□ 1.51
C9orf47-202ENST00000375850 UAP1L1Q3KQV9 507 aa24.47■■□□□ 1.51
C9orf47-202ENST00000375850 CLEC20AQ6ZU45 233 aa24.47■■□□□ 1.51
C9orf47-202ENST00000375850 INTS8Q75QN2 995 aaKnown RBP24.47■■□□□ 1.51
C9orf47-202ENST00000375850 ARMCX6Q7L4S7 300 aa24.47■■□□□ 1.51
C9orf47-202ENST00000375850 CHPFQ8IZ52 775 aa24.47■■□□□ 1.51
C9orf47-202ENST00000375850 C12orf29Q8N999 325 aa24.47■■□□□ 1.51
C9orf47-202ENST00000375850 CCDC150Q8NCX0 1101 aa24.47■■□□□ 1.51
C9orf47-202ENST00000375850 CYFIP2Q96F07 1278 aa24.47■■□□□ 1.51
C9orf47-202ENST00000375850 FAXDC2Q96IV6 333 aa24.47■■□□□ 1.51
C9orf47-202ENST00000375850 ZDHHC4Q9NPG8 344 aa24.47■■□□□ 1.51
C9orf47-202ENST00000375850 TMEM74BQ9NUR3 256 aa24.47■■□□□ 1.51
C9orf47-202ENST00000375850 CALCOCO1Q9P1Z2 691 aa24.47■■□□□ 1.51
C9orf47-202ENST00000375850 HMGXB4Q9UGU5 601 aa24.47■■□□□ 1.51
C9orf47-202ENST00000375850 DNMT3LQ9UJW3 386 aa24.47■■□□□ 1.51
C9orf47-202ENST00000375850 ZNF510Q9Y2H8 683 aa24.47■■□□□ 1.51
C9orf47-202ENST00000375850 TMEM8BA6NDV4 472 aa24.46■■□□□ 1.51
C9orf47-202ENST00000375850 NEDD8-MDP1E9PL57 170 aa24.46■■□□□ 1.51
C9orf47-202ENST00000375850 CMA1P23946 247 aa24.46■■□□□ 1.51
C9orf47-202ENST00000375850 ADORA2BP29275 332 aa24.46■■□□□ 1.51
C9orf47-202ENST00000375850 VAMP7P51809 220 aa24.46■■□□□ 1.51
C9orf47-202ENST00000375850 GFPT1Q06210 699 aaPredicted RBP24.46■■□□□ 1.51
C9orf47-202ENST00000375850 FOXC1Q12948 553 aa24.46■■□□□ 1.51
C9orf47-202ENST00000375850 E2F5Q15329 346 aa24.46■■□□□ 1.51
C9orf47-202ENST00000375850 UNQ6494/PRO21346Q6UXR6 183 aa24.46■■□□□ 1.51
C9orf47-202ENST00000375850 TTC39CQ8N584 583 aa24.46■■□□□ 1.51
C9orf47-202ENST00000375850 WBP2Q969T9 261 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms