RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 CTHP32929 405 aa16.77■□□□□ 0.28
C11orf88-202ENST00000375618 CLCN5P51795 746 aa16.77■□□□□ 0.28
C11orf88-202ENST00000375618 PLCB2Q00722 1185 aa16.77■□□□□ 0.28
C11orf88-202ENST00000375618 RUNX3Q13761 415 aa16.77■□□□□ 0.28
C11orf88-202ENST00000375618 GAB4Q2WGN9 574 aa16.77■□□□□ 0.28
C11orf88-202ENST00000375618 SCML4Q8N228 414 aa16.77■□□□□ 0.28
C11orf88-202ENST00000375618 CSGALNACT1Q8TDX6 532 aa16.77■□□□□ 0.28
C11orf88-202ENST00000375618 DDX1Q92499 740 aaKnown RBP16.77■□□□□ 0.28
C11orf88-202ENST00000375618 HSFY1Q96LI6 401 aa16.77■□□□□ 0.28
C11orf88-202ENST00000375618 SLC4A5Q9BY07 1137 aa16.77■□□□□ 0.28
C11orf88-202ENST00000375618 CNGB3Q9NQW8 809 aa16.77■□□□□ 0.28
C11orf88-202ENST00000375618 CLIC5Q9NZA1 410 aa16.77■□□□□ 0.28
C11orf88-202ENST00000375618 PCDHGC3Q9UN70 934 aa16.77■□□□□ 0.28
C11orf88-202ENST00000375618 SPECC1L-ADORA2AF8WAN1 911 aa16.76■□□□□ 0.27
C11orf88-202ENST00000375618 STK25O00506 426 aa16.76■□□□□ 0.27
C11orf88-202ENST00000375618 MED7O43513 233 aa16.76■□□□□ 0.27
C11orf88-202ENST00000375618 CYP11B1P15538 503 aa16.76■□□□□ 0.27
C11orf88-202ENST00000375618 COL9A1P20849 921 aa16.76■□□□□ 0.27
C11orf88-202ENST00000375618 RFX1P22670 979 aa16.76■□□□□ 0.27
C11orf88-202ENST00000375618 ATP5C1P36542 298 aaKnown RBP16.76■□□□□ 0.27
C11orf88-202ENST00000375618 KPNA1P52294 538 aaPredicted RBP16.76■□□□□ 0.27
C11orf88-202ENST00000375618 PTK2Q05397 1052 aa16.76■□□□□ 0.27
C11orf88-202ENST00000375618 UBXN2BQ14CS0 331 aa16.76■□□□□ 0.27
C11orf88-202ENST00000375618 PDGFRLQ15198 375 aa16.76■□□□□ 0.27
C11orf88-202ENST00000375618 MEA1Q16626 185 aa16.76■□□□□ 0.27
C11orf88-202ENST00000375618 ITPRIPL2Q3MIP1 535 aa16.76■□□□□ 0.27
C11orf88-202ENST00000375618 C10orf120Q5SQS8 335 aa16.76■□□□□ 0.27
C11orf88-202ENST00000375618 BSPRYQ5W0U4 402 aa16.76■□□□□ 0.27
C11orf88-202ENST00000375618 CC2D1AQ6P1N0 951 aaPredicted RBP16.76■□□□□ 0.27
C11orf88-202ENST00000375618 KLHDC10Q6PID8 442 aa16.76■□□□□ 0.27
C11orf88-202ENST00000375618 NOP9Q86U38 636 aaKnown RBP16.76■□□□□ 0.27
C11orf88-202ENST00000375618 SIX6OS1Q8N1H7 587 aa16.76■□□□□ 0.27
C11orf88-202ENST00000375618 ZNF276Q8N554 614 aa16.76■□□□□ 0.27
C11orf88-202ENST00000375618 EDEM1Q92611 657 aa16.76■□□□□ 0.27
C11orf88-202ENST00000375618 SHDQ96IW2 340 aa16.76■□□□□ 0.27
C11orf88-202ENST00000375618 PIWIL1Q96J94 861 aaKnown RBP16.76■□□□□ 0.27
C11orf88-202ENST00000375618 CPXM1Q96SM3 734 aa16.76■□□□□ 0.27
C11orf88-202ENST00000375618 MIS12Q9H081 205 aa16.76■□□□□ 0.27
C11orf88-202ENST00000375618 ECT2Q9H8V3 914 aa16.76■□□□□ 0.27
C11orf88-202ENST00000375618 ZDBF2Q9HCK1 2354 aa16.75■□□□□ 0.27
C11orf88-202ENST00000375618 A0A1B0GTH6 734 aa16.75■□□□□ 0.27
C11orf88-202ENST00000375618 FAM170BA6NMN3 283 aa16.75■□□□□ 0.27
C11orf88-202ENST00000375618 E5RJQ4 531 aa16.75■□□□□ 0.27
C11orf88-202ENST00000375618 PAPSS1O43252 624 aaPredicted RBP16.75■□□□□ 0.27
C11orf88-202ENST00000375618 GFPT2O94808 682 aa16.75■□□□□ 0.27
C11orf88-202ENST00000375618 FYNP06241 537 aa16.75■□□□□ 0.27
C11orf88-202ENST00000375618 IFNAR2P48551 515 aa16.75■□□□□ 0.27
C11orf88-202ENST00000375618 PSEN1P49768 467 aa16.75■□□□□ 0.27
C11orf88-202ENST00000375618 EFEMP1Q12805 493 aa16.75■□□□□ 0.27
C11orf88-202ENST00000375618 PDCLQ13371 301 aa16.75■□□□□ 0.27
C11orf88-202ENST00000375618 SMYD5Q6GMV2 418 aa16.75■□□□□ 0.27
C11orf88-202ENST00000375618 MIB1Q86YT6 1006 aa16.75■□□□□ 0.27
C11orf88-202ENST00000375618 BBS7Q8IWZ6 715 aa16.75■□□□□ 0.27
C11orf88-202ENST00000375618 SCUBE3Q8IX30 993 aa16.75■□□□□ 0.27
C11orf88-202ENST00000375618 C1orf131Q8NDD1 294 aaKnown RBP16.75■□□□□ 0.27
C11orf88-202ENST00000375618 PRSS33Q8NF86 280 aa16.75■□□□□ 0.27
C11orf88-202ENST00000375618 SLC20A1Q8WUM9 679 aa16.75■□□□□ 0.27
C11orf88-202ENST00000375618 FAM3CQ92520 227 aa16.75■□□□□ 0.27
C11orf88-202ENST00000375618 P2RY11Q96G91 374 aa16.75■□□□□ 0.27
C11orf88-202ENST00000375618 PCMTD1Q96MG8 357 aaPredicted RBP16.75■□□□□ 0.27
C11orf88-202ENST00000375618 NACA2Q9H009 215 aa16.75■□□□□ 0.27
C11orf88-202ENST00000375618 FBRSL1Q9HCM7 1045 aaKnown RBP16.75■□□□□ 0.27
C11orf88-202ENST00000375618 ST7Q9NRC1 585 aa16.75■□□□□ 0.27
C11orf88-202ENST00000375618 RASAL2Q9UJF2 1139 aa16.75■□□□□ 0.27
C11orf88-202ENST00000375618 DNMT3LQ9UJW3 386 aa16.75■□□□□ 0.27
C11orf88-202ENST00000375618 NOCTQ9UK39 431 aaKnown RBP16.75■□□□□ 0.27
C11orf88-202ENST00000375618 NDRG2Q9UN36 371 aaKnown RBP16.75■□□□□ 0.27
C11orf88-202ENST00000375618 SIT1Q9Y3P8 196 aa16.75■□□□□ 0.27
C11orf88-202ENST00000375618 E2F8A0AVK6 867 aa16.74■□□□□ 0.27
C11orf88-202ENST00000375618 STC2O76061 302 aa16.74■□□□□ 0.27
C11orf88-202ENST00000375618 KLKB1P03952 638 aa16.74■□□□□ 0.27
C11orf88-202ENST00000375618 CYP17A1P05093 508 aa16.74■□□□□ 0.27
C11orf88-202ENST00000375618 MMEP08473 750 aa16.74■□□□□ 0.27
C11orf88-202ENST00000375618 RALAP11233 206 aa16.74■□□□□ 0.27
C11orf88-202ENST00000375618 CHRNB2P17787 502 aa16.74■□□□□ 0.27
C11orf88-202ENST00000375618 GJA4P35212 333 aa16.74■□□□□ 0.27
C11orf88-202ENST00000375618 SOX5P35711 763 aa16.74■□□□□ 0.27
C11orf88-202ENST00000375618 MLLT6P55198 1093 aaPredicted RBP16.74■□□□□ 0.27
C11orf88-202ENST00000375618 TAF3Q5VWG9 929 aa16.74■□□□□ 0.27
C11orf88-202ENST00000375618 ZNF852Q6ZMS4 543 aa16.74■□□□□ 0.27
C11orf88-202ENST00000375618 TMEM110Q86TL2 294 aa16.74■□□□□ 0.27
C11orf88-202ENST00000375618 DDX42Q86XP3 938 aaKnown RBP eCLIP16.74■□□□□ 0.27
C11orf88-202ENST00000375618 ADGRG2Q8IZP9 1017 aa16.74■□□□□ 0.27
C11orf88-202ENST00000375618 NEK11Q8NG66 645 aa16.74■□□□□ 0.27
C11orf88-202ENST00000375618 EPS8L1Q8TE68 723 aa16.74■□□□□ 0.27
C11orf88-202ENST00000375618 STK32AQ8WU08 396 aa16.74■□□□□ 0.27
C11orf88-202ENST00000375618 LHX5Q9H2C1 402 aa16.74■□□□□ 0.27
C11orf88-202ENST00000375618 C8orf33Q9H7E9 229 aaPredicted RBP16.74■□□□□ 0.27
C11orf88-202ENST00000375618 RBM12Q9NTZ6 932 aaKnown RBP16.74■□□□□ 0.27
C11orf88-202ENST00000375618 ERBB2P04626 1255 aa16.73■□□□□ 0.27
C11orf88-202ENST00000375618 HMBSP08397 361 aa16.73■□□□□ 0.27
C11orf88-202ENST00000375618 FANCCQ00597 558 aa16.73■□□□□ 0.27
C11orf88-202ENST00000375618 NR1I3Q14994 352 aa16.73■□□□□ 0.27
C11orf88-202ENST00000375618 PON2Q15165 354 aa16.73■□□□□ 0.27
C11orf88-202ENST00000375618 TAF5Q15542 800 aa16.73■□□□□ 0.27
C11orf88-202ENST00000375618 PTPN20Q4JDL3 420 aa16.73■□□□□ 0.27
C11orf88-202ENST00000375618 BTBD8Q5XKL5 378 aa16.73■□□□□ 0.27
C11orf88-202ENST00000375618 RHBDF2Q6PJF5 856 aa16.73■□□□□ 0.27
C11orf88-202ENST00000375618 Q6ZNB5 142 aa16.73■□□□□ 0.27
C11orf88-202ENST00000375618 HTR3DQ70Z44 454 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms