RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 XPO7Q9UIA9 1087 aaKnown RBP6.81□□□□□ -1.32
UBR4-204ENST00000375254 NSD3Q9BZ95 1437 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 LRRC9Q6ZRR7 1453 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 SLC16A3O15427 465 aaKnown RBP6.81□□□□□ -1.32
UBR4-204ENST00000375254 TIMM44O43615 452 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 MPZL2O60487 215 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 ATG7O95352 703 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 RPA1P27694 616 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 IFNL1Q8IU54 200 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 COLGALT2Q8IYK4 626 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 GCNAQ96QF7 691 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 DRG1Q9Y295 367 aaKnown RBP6.81□□□□□ -1.32
UBR4-204ENST00000375254 IFT52Q9Y366 437 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 UMODL1Q5DID0 1318 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 C3orf70A6NLC5 250 aaPredicted RBP6.81□□□□□ -1.32
UBR4-204ENST00000375254 C5orf58C9J3I9 102 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 PDXKO00764 312 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 TRAFD1O14545 582 aaPredicted RBP6.81□□□□□ -1.32
UBR4-204ENST00000375254 TPBGLP0DKB5 382 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 RBL1P28749 1068 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 HNMTP50135 292 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 CDH6P55285 790 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 ZBTB38Q8NAP3 1195 aaPredicted RBP6.81□□□□□ -1.32
UBR4-204ENST00000375254 PGBD4Q96DM1 585 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 GAL3ST1Q99999 423 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 SLC39A1Q9NY26 324 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 NDUFAF1Q9Y375 327 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 ATP6V1G2-DDX39BF2Z307 99 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 DNAJA2O60884 412 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 SERPINF2P08697 491 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 UMPSP11172 480 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 EIF4A2Q14240 407 aaKnown RBP6.81□□□□□ -1.32
UBR4-204ENST00000375254 STYK1Q6J9G0 422 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 PKN3Q6P5Z2 889 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 ARMCX2Q7L311 632 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 ZNF804AQ7Z570 1209 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 ULK4Q96C45 1275 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 CHP1Q99653 195 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 SENP7Q9BQF6 1050 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 KIAA1683Q9H0B3 1180 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 ALG6Q9Y672 507 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 DNM1LO00429 736 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 GDF11O95390 407 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 GPRC6AQ5T6X5 926 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 TMEM53Q6P2H8 277 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 GOLM1Q8NBJ4 401 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 LURAP1Q96LR2 239 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 ACADLP28330 430 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 GPR107Q5VW38 600 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 MFSD5Q6N075 450 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 TIGD7Q6NT04 549 aaPredicted RBP6.81□□□□□ -1.32
UBR4-204ENST00000375254 RAD9BQ6WBX8 426 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 ELMO2Q96JJ3 720 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 PHF12Q96QT6 1004 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 USP44Q9H0E7 712 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 SLITRK2Q9H156 845 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 OLA1Q9NTK5 396 aaKnown RBP6.81□□□□□ -1.32
UBR4-204ENST00000375254 KCNN4O15554 427 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 C8BP07358 591 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 ERCC2P18074 760 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 RXRAP19793 462 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 RPS6P62753 249 aaKnown RBP6.8□□□□□ -1.32
UBR4-204ENST00000375254 PRKG2Q13237 762 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 HES5Q5TA89 166 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.8□□□□□ -1.326e-6■□□□□ 8.9
UBR4-204ENST00000375254 TMC3Q7Z5M5 1100 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 C12orf50Q8NA57 414 aaPredicted RBP6.8□□□□□ -1.32
UBR4-204ENST00000375254 METTL8Q9H825 291 aaKnown RBP6.8□□□□□ -1.32
UBR4-204ENST00000375254 POLG2Q9UHN1 485 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 MPOP05164 745 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 NCAM1P13591 858 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 FDPSP14324 419 aaKnown RBP6.8□□□□□ -1.32
UBR4-204ENST00000375254 SLC9A5Q14940 896 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 TAF12Q16514 161 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 DGKDQ16760 1214 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 ATPAF2Q8N5M1 289 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 METTL13Q8N6R0 699 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 SLC22A4Q9H015 551 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 TTYH1Q9H313 450 aaPredicted RBP6.8□□□□□ -1.32
UBR4-204ENST00000375254 MYO1GB0I1T2 1018 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 CRABP2P29373 138 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 SPATS1Q496A3 300 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 PADI6Q6TGC4 694 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 PIGWQ7Z7B1 504 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 MCFD2Q8NI22 146 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 FAM111AQ96PZ2 611 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 S100A13Q99584 98 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 IRF2BPLQ9H1B7 796 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 CYP4F12Q9HCS2 524 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 CIAO1O76071 339 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 APRTP07741 180 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 INSCQ1MX18 579 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 BRMS1LQ5PSV4 323 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 KBTBD7Q8WVZ9 684 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 PFDN5Q99471 154 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 ZNF222Q9UK12 451 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 ALG5Q9Y673 324 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 MROH5Q6ZUA9 1318 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 ITGA2P17301 1181 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 DPYDQ12882 1025 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms