RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 FAF2Q96CS3 445 aa12.73□□□□□ -0.37
UBR4-203ENST00000375225 PAFAH2Q99487 392 aa12.73□□□□□ -0.37
UBR4-203ENST00000375225 TUBB6Q9BUF5 446 aa12.73□□□□□ -0.37
UBR4-203ENST00000375225 TRIM6Q9C030 488 aaPredicted RBP12.73□□□□□ -0.37
UBR4-203ENST00000375225 ECT2Q9H8V3 914 aa12.73□□□□□ -0.37
UBR4-203ENST00000375225 PRKAG3Q9UGI9 489 aa12.73□□□□□ -0.37
UBR4-203ENST00000375225 UBQLN1Q9UMX0 589 aaKnown RBP12.73□□□□□ -0.37
UBR4-203ENST00000375225 GOLGA8MH3BSY2 632 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 HAS3O00219 553 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 TRDMT1O14717 391 aaKnown RBP12.72□□□□□ -0.37
UBR4-203ENST00000375225 SPAG7O75391 227 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 NPTXRO95502 500 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 ALADP13716 330 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 ELNP15502 786 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 GCAP28676 217 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 BCAT1P54687 386 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 ZNF200P98182 395 aaPredicted RBP12.72□□□□□ -0.37
UBR4-203ENST00000375225 PURAQ00577 322 aaKnown RBP12.72□□□□□ -0.37
UBR4-203ENST00000375225 BNIP1Q12981 228 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 FASTKD3Q14CZ7 662 aaKnown RBP12.72□□□□□ -0.37
UBR4-203ENST00000375225 GALNTL6Q49A17 601 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 GNASQ5JWF2 1037 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 SCARA3Q6AZY7 606 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 SCYL2Q6P3W7 929 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 CATSPER4Q7RTX7 472 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 CCDC91Q7Z6B0 441 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 TMEM110Q86TL2 294 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 UNC45BQ8IWX7 931 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 C7orf31Q8N865 590 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 DENND1AQ8TEH3 1009 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 KLHL29Q96CT2 875 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 RTP4Q96DX8 246 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 SNX27Q96L92 541 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 MTG1Q9BT17 334 aaPredicted RBP12.72□□□□□ -0.37
UBR4-203ENST00000375225 DHRS4Q9BTZ2 278 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 BEGAINQ9BUH8 593 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 SLC4A5Q9BY07 1137 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 MLXIPLQ9NP71 852 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 PNPLA8Q9NP80 782 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 XPNPEP3Q9NQH7 507 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 SETD4Q9NVD3 440 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 HMGXB4Q9UGU5 601 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 PHTF1Q9UMS5 762 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.72□□□□□ -0.37
UBR4-203ENST00000375225 SMIM35A0A1B0GVV1 85 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 C17orf102A2RUQ5 167 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 MGRN1O60291 552 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 STK10O94804 968 aaKnown RBP12.72□□□□□ -0.37
UBR4-203ENST00000375225 UBOX5O94941 541 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 NQO1P15559 274 aaKnown RBP12.72□□□□□ -0.37
UBR4-203ENST00000375225 KRT4P19013 534 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 PTPN9P43378 593 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 GPX6P59796 221 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 NKX3-2P78367 333 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 HTRA3P83110 453 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 BST2Q10589 180 aaKnown RBP12.72□□□□□ -0.37
UBR4-203ENST00000375225 ORC1Q13415 861 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 MARCH8Q5T0T0 291 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 CAPN12Q6ZSI9 719 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 KIAA0319LQ8IZA0 1049 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 IQCGQ9H095 443 aaKnown RBP12.72□□□□□ -0.37
UBR4-203ENST00000375225 VPS11Q9H270 941 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 SNX25Q9H3E2 840 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 NGRNQ9NPE2 291 aaKnown RBP12.72□□□□□ -0.37
UBR4-203ENST00000375225 ABCF3Q9NUQ8 709 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 TJP2Q9UDY2 1190 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 SNX9Q9Y5X1 595 aa12.72□□□□□ -0.37
UBR4-203ENST00000375225 MBLAC1A4D2B0 266 aaPredicted RBP12.71□□□□□ -0.38
UBR4-203ENST00000375225 HACD1B0YJ81 288 aa12.71□□□□□ -0.38
UBR4-203ENST00000375225 KCNN4O15554 427 aa12.71□□□□□ -0.38
UBR4-203ENST00000375225 TYROBPO43914 113 aa12.71□□□□□ -0.38
UBR4-203ENST00000375225 EDF1O60869 148 aaKnown RBP12.71□□□□□ -0.38
UBR4-203ENST00000375225 KRT37O76014 449 aa12.71□□□□□ -0.38
UBR4-203ENST00000375225 CD48P09326 243 aa12.71□□□□□ -0.38
UBR4-203ENST00000375225 FAM163BP0C2L3 166 aa12.71□□□□□ -0.38
UBR4-203ENST00000375225 CYP2C9P11712 490 aa12.71□□□□□ -0.38
UBR4-203ENST00000375225 GDF10P55107 478 aa12.71□□□□□ -0.38
UBR4-203ENST00000375225 WDR4P57081 412 aaKnown RBP12.71□□□□□ -0.38
UBR4-203ENST00000375225 YWHAGP61981 247 aaKnown RBP eCLIP12.71□□□□□ -0.38
UBR4-203ENST00000375225 ELF3P78545 371 aaPredicted RBP12.71□□□□□ -0.38
UBR4-203ENST00000375225 TRIM32Q13049 653 aa12.71□□□□□ -0.38
UBR4-203ENST00000375225 MPP2Q14168 576 aa12.71□□□□□ -0.38
UBR4-203ENST00000375225 KCNJ11Q14654 390 aa12.71□□□□□ -0.38
UBR4-203ENST00000375225 CDO1Q16878 200 aa12.71□□□□□ -0.38
UBR4-203ENST00000375225 FNBP1LQ5T0N5 605 aa12.71□□□□□ -0.38
UBR4-203ENST00000375225 SLC9A4Q6AI14 798 aa12.71□□□□□ -0.38
UBR4-203ENST00000375225 OLFML1Q6UWY5 402 aa12.71□□□□□ -0.38
UBR4-203ENST00000375225 RPAINQ86UA6 219 aa12.71□□□□□ -0.38
UBR4-203ENST00000375225 PSTKQ8IV42 348 aaKnown RBP12.71□□□□□ -0.38
UBR4-203ENST00000375225 HACE1Q8IYU2 909 aa12.71□□□□□ -0.38
UBR4-203ENST00000375225 C4orf33Q8N1A6 199 aa12.71□□□□□ -0.38
UBR4-203ENST00000375225 SLAIN1Q8ND83 568 aa12.71□□□□□ -0.38
UBR4-203ENST00000375225 MCUQ8NE86 351 aa12.71□□□□□ -0.38
UBR4-203ENST00000375225 OR6B3Q8NGW1 331 aa12.71□□□□□ -0.38
UBR4-203ENST00000375225 FAM172AQ8WUF8 416 aa12.71□□□□□ -0.38
UBR4-203ENST00000375225 ZBTB10Q96DT7 871 aa12.71□□□□□ -0.38
UBR4-203ENST00000375225 MTBPQ96DY7 904 aa12.71□□□□□ -0.38
UBR4-203ENST00000375225 TNIP3Q96KP6 325 aa12.71□□□□□ -0.38
UBR4-203ENST00000375225 HSFY1Q96LI6 401 aa12.71□□□□□ -0.38
UBR4-203ENST00000375225 LRRC37BQ96QE4 947 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms