RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 FAM193BQ96PV7 902 aaPredicted RBP5.3□□□□□ -1.56
USP48-202ENST00000374730 MED15Q96RN5 788 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 CTAGE1Q96RT6 745 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 TMEM47Q9BQJ4 181 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 CCDC94Q9BW85 323 aaPredicted RBP5.3□□□□□ -1.56
USP48-202ENST00000374730 CCSER1Q9C0I3 900 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 MAGEF1Q9HAY2 307 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 RMND1Q9NWS8 449 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 BARHL2Q9NY43 387 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 GPRC5DQ9NZD1 345 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 TRPC5Q9UL62 973 aaPredicted RBP5.3□□□□□ -1.56
USP48-202ENST00000374730 DMRT1Q9Y5R6 373 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 MYH7BA7E2Y1 1941 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 RPTORQ8N122 1335 aa5.29□□□□□ -1.56
USP48-202ENST00000374730 ESYT2A0FGR8 921 aa5.29□□□□□ -1.56
USP48-202ENST00000374730 GAGE12BA1L429 117 aa5.29□□□□□ -1.56
USP48-202ENST00000374730 GAGE12HA6NDE8 117 aa5.29□□□□□ -1.56
USP48-202ENST00000374730 DIRC3C9JPN6 131 aa5.29□□□□□ -1.56
USP48-202ENST00000374730 POLRMTO00411 1230 aaKnown RBP5.29□□□□□ -1.56
USP48-202ENST00000374730 CYTH3O43739 400 aa5.29□□□□□ -1.56
USP48-202ENST00000374730 PHF2O75151 1096 aa5.29□□□□□ -1.56
USP48-202ENST00000374730 ITGA10O75578 1167 aa5.29□□□□□ -1.56
USP48-202ENST00000374730 SLU7O95391 586 aaKnown RBP5.29□□□□□ -1.56
USP48-202ENST00000374730 ABHD16AO95870 558 aa5.29□□□□□ -1.56
USP48-202ENST00000374730 VEGFAP15692 232 aaPredicted RBP5.29□□□□□ -1.56
USP48-202ENST00000374730 APOBEC3AP31941 199 aaPredicted RBP5.29□□□□□ -1.56
USP48-202ENST00000374730 MRPS9P82933 396 aaKnown RBP5.29□□□□□ -1.56
USP48-202ENST00000374730 DDR1Q08345 913 aa5.29□□□□□ -1.56
USP48-202ENST00000374730 KCNB1Q14721 858 aa5.29□□□□□ -1.56
USP48-202ENST00000374730 IL17AQ16552 155 aa5.29□□□□□ -1.56
USP48-202ENST00000374730 MST1LQ2TV78 715 aa5.29□□□□□ -1.56
USP48-202ENST00000374730 ZNF658Q5TYW1 1059 aaPredicted RBP5.29□□□□□ -1.56
USP48-202ENST00000374730 KCNV1Q6PIU1 500 aa5.29□□□□□ -1.56
USP48-202ENST00000374730 MAPKAPK5Q8IW41 473 aa5.29□□□□□ -1.56
USP48-202ENST00000374730 PDCL2Q8N4E4 241 aa5.29□□□□□ -1.56
USP48-202ENST00000374730 AFAP1L2Q8N4X5 818 aa5.29□□□□□ -1.56
USP48-202ENST00000374730 TC2NQ8N9U0 490 aa5.29□□□□□ -1.56
USP48-202ENST00000374730 SLC44A5Q8NCS7 719 aa5.29□□□□□ -1.56
USP48-202ENST00000374730 PROKR1Q8TCW9 393 aa5.29□□□□□ -1.56
USP48-202ENST00000374730 MORC4Q8TE76 937 aa5.29□□□□□ -1.56
USP48-202ENST00000374730 TGFBRAP1Q8WUH2 860 aa5.29□□□□□ -1.56
USP48-202ENST00000374730 CHAC2Q8WUX2 184 aa5.29□□□□□ -1.56
USP48-202ENST00000374730 CCDC51Q96ER9 411 aa5.29□□□□□ -1.56
USP48-202ENST00000374730 AK8Q96MA6 479 aa5.29□□□□□ -1.56
USP48-202ENST00000374730 PANX2Q96RD6 677 aa5.29□□□□□ -1.56
USP48-202ENST00000374730 AGAP2Q99490 1192 aa5.29□□□□□ -1.56
USP48-202ENST00000374730 EYA3Q99504 573 aa5.29□□□□□ -1.56
USP48-202ENST00000374730 BAG1Q99933 345 aaPredicted RBP5.29□□□□□ -1.56
USP48-202ENST00000374730 TTPALQ9BTX7 342 aa5.29□□□□□ -1.56
USP48-202ENST00000374730 NAA15Q9BXJ9 866 aaKnown RBP5.29□□□□□ -1.56
USP48-202ENST00000374730 GTPBP4Q9BZE4 634 aaKnown RBP5.29□□□□□ -1.56
USP48-202ENST00000374730 ZMYND12Q9H0C1 365 aa5.29□□□□□ -1.56
USP48-202ENST00000374730 CUEDC2Q9H467 287 aa5.29□□□□□ -1.56
USP48-202ENST00000374730 SAMSN1Q9NSI8 373 aaKnown RBP5.29□□□□□ -1.56
USP48-202ENST00000374730 TRMT1Q9NXH9 659 aaKnown RBP5.29□□□□□ -1.56
USP48-202ENST00000374730 CGNQ9P2M7 1197 aaKnown RBP5.29□□□□□ -1.56
USP48-202ENST00000374730 ADD3Q9UEY8 706 aaKnown RBP5.29□□□□□ -1.56
USP48-202ENST00000374730 LIMA1Q9UHB6 759 aaKnown RBP5.29□□□□□ -1.56
USP48-202ENST00000374730 RWDD2AQ9UIY3 292 aa5.29□□□□□ -1.56
USP48-202ENST00000374730 PCDHA6Q9UN73 950 aa5.29□□□□□ -1.56
USP48-202ENST00000374730 TNS1Q9HBL0 1735 aaKnown RBP5.28□□□□□ -1.56
USP48-202ENST00000374730 SCN9AQ15858 1988 aa5.28□□□□□ -1.56
USP48-202ENST00000374730 IGKV6D-41A0A0C4DH26 115 aa5.28□□□□□ -1.56
USP48-202ENST00000374730 AHRRA9YTQ3 701 aa5.28□□□□□ -1.56
USP48-202ENST00000374730 AKR1B15C9JRZ8 316 aaPredicted RBP5.28□□□□□ -1.56
USP48-202ENST00000374730 KLRF2D3W0D1 207 aa5.28□□□□□ -1.56
USP48-202ENST00000374730 ADAMTS3O15072 1205 aa5.28□□□□□ -1.56
USP48-202ENST00000374730 PARP1P09874 1014 aaKnown RBP5.28□□□□□ -1.56
USP48-202ENST00000374730 OR52Z1P0C646 297 aa5.28□□□□□ -1.56
USP48-202ENST00000374730 SNHG28P0DPA3 235 aa5.28□□□□□ -1.56
USP48-202ENST00000374730 LAG3P18627 525 aa5.28□□□□□ -1.56
USP48-202ENST00000374730 MGAT1P26572 445 aa5.28□□□□□ -1.56
USP48-202ENST00000374730 ZFP36P26651 326 aaKnown RBP5.28□□□□□ -1.56
USP48-202ENST00000374730 GNA11P29992 359 aa5.28□□□□□ -1.56
USP48-202ENST00000374730 HOXA7P31268 230 aaPredicted RBP5.28□□□□□ -1.56
USP48-202ENST00000374730 PPP1R2P41236 205 aa5.28□□□□□ -1.56
USP48-202ENST00000374730 STAT6P42226 847 aa5.28□□□□□ -1.56
USP48-202ENST00000374730 MASP1P48740 699 aa5.28□□□□□ -1.56
USP48-202ENST00000374730 GABPAQ06546 454 aa5.28□□□□□ -1.56
USP48-202ENST00000374730 TRIM14Q14142 442 aa5.28□□□□□ -1.56
USP48-202ENST00000374730 FILIP1LQ4L180 1135 aa5.28□□□□□ -1.56
USP48-202ENST00000374730 TIGD2Q4W5G0 525 aa5.28□□□□□ -1.56
USP48-202ENST00000374730 ASPRV1Q53RT3 343 aa5.28□□□□□ -1.56
USP48-202ENST00000374730 CCDC93Q567U6 631 aa5.28□□□□□ -1.56
USP48-202ENST00000374730 MFSD14BQ5SR56 506 aa5.28□□□□□ -1.56
USP48-202ENST00000374730 MEX3CQ5U5Q3 659 aaKnown RBP5.28□□□□□ -1.56
USP48-202ENST00000374730 LAIR1Q6GTX8 287 aa5.28□□□□□ -1.56
USP48-202ENST00000374730 TRIM65Q6PJ69 517 aa5.28□□□□□ -1.56
USP48-202ENST00000374730 GDF7Q7Z4P5 450 aa5.28□□□□□ -1.56
USP48-202ENST00000374730 HEATR3Q7Z4Q2 680 aa5.28□□□□□ -1.56
USP48-202ENST00000374730 STRA8Q7Z7C7 330 aa5.28□□□□□ -1.56
USP48-202ENST00000374730 XYLT1Q86Y38 959 aa5.28□□□□□ -1.56
USP48-202ENST00000374730 EXOC8Q8IYI6 725 aa5.28□□□□□ -1.56
USP48-202ENST00000374730 ZNF397Q8NF99 534 aaPredicted RBP5.28□□□□□ -1.56
USP48-202ENST00000374730 UBE2Q2Q8WVN8 375 aa5.28□□□□□ -1.56
USP48-202ENST00000374730 MYEOVQ96EZ4 313 aa5.28□□□□□ -1.56
USP48-202ENST00000374730 MLST8Q9BVC4 326 aa5.28□□□□□ -1.56
USP48-202ENST00000374730 COA1Q9GZY4 146 aa5.28□□□□□ -1.56
USP48-202ENST00000374730 RIOX1Q9H6W3 641 aa5.28□□□□□ -1.56
USP48-202ENST00000374730 C6orf50Q9HD87 102 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms