RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 SLC6A3Q01959 620 aa15.74■□□□□ 0.11
HSPG2-201ENST00000374673 PTP4A2Q12974 167 aa15.74■□□□□ 0.11
HSPG2-201ENST00000374673 MAPK8IP2Q13387 824 aaPredicted RBP15.74■□□□□ 0.11
HSPG2-201ENST00000374673 HTR4Q13639 388 aa15.74■□□□□ 0.11
HSPG2-201ENST00000374673 BSPRYQ5W0U4 402 aa15.74■□□□□ 0.11
HSPG2-201ENST00000374673 BTBD8Q5XKL5 378 aa15.74■□□□□ 0.11
HSPG2-201ENST00000374673 OR6B2Q6IFH4 312 aa15.74■□□□□ 0.11
HSPG2-201ENST00000374673 ACAD10Q6JQN1 1059 aa15.74■□□□□ 0.11
HSPG2-201ENST00000374673 OLFML1Q6UWY5 402 aa15.74■□□□□ 0.11
HSPG2-201ENST00000374673 MMS22LQ6ZRQ5 1243 aa15.74■□□□□ 0.11
HSPG2-201ENST00000374673 TOGARAM2Q6ZUX3 1019 aa15.74■□□□□ 0.11
HSPG2-201ENST00000374673 HFE2Q6ZVN8 426 aa15.74■□□□□ 0.11
HSPG2-201ENST00000374673 MON1BQ7L1V2 547 aa15.74■□□□□ 0.11
HSPG2-201ENST00000374673 BEND5Q7L4P6 421 aa15.74■□□□□ 0.11
HSPG2-201ENST00000374673 TADA2BQ86TJ2 420 aa15.74■□□□□ 0.11
HSPG2-201ENST00000374673 XYLT1Q86Y38 959 aa15.74■□□□□ 0.11
HSPG2-201ENST00000374673 GOLGA1Q92805 767 aa15.74■□□□□ 0.11
HSPG2-201ENST00000374673 E2F7Q96AV8 911 aa15.74■□□□□ 0.11
HSPG2-201ENST00000374673 PIWIL1Q96J94 861 aaKnown RBP15.74■□□□□ 0.11
HSPG2-201ENST00000374673 CYP2S1Q96SQ9 504 aa15.74■□□□□ 0.11
HSPG2-201ENST00000374673 C11orf70Q9BRQ4 267 aa15.74■□□□□ 0.11
HSPG2-201ENST00000374673 TRIM62Q9BVG3 475 aa15.74■□□□□ 0.11
HSPG2-201ENST00000374673 RNF38Q9H0F5 515 aa15.74■□□□□ 0.11
HSPG2-201ENST00000374673 KIF9Q9HAQ2 790 aa15.74■□□□□ 0.11
HSPG2-201ENST00000374673 ZFP14Q9HCL3 533 aa15.74■□□□□ 0.11
HSPG2-201ENST00000374673 IGSF9Q9P2J2 1179 aa15.74■□□□□ 0.11
HSPG2-201ENST00000374673 STRIP2Q9ULQ0 834 aa15.74■□□□□ 0.11
HSPG2-201ENST00000374673 ARHGAP26Q9UNA1 814 aa15.74■□□□□ 0.11
HSPG2-201ENST00000374673 PRAMEF12O95522 483 aa15.73■□□□□ 0.11
HSPG2-201ENST00000374673 CALB1P05937 261 aa15.73■□□□□ 0.11
HSPG2-201ENST00000374673 CKMP06732 381 aa15.73■□□□□ 0.11
HSPG2-201ENST00000374673 TCF3P15923 654 aa15.73■□□□□ 0.11
HSPG2-201ENST00000374673 ATP5C1P36542 298 aaKnown RBP15.73■□□□□ 0.11
HSPG2-201ENST00000374673 MRE11P49959 708 aa15.73■□□□□ 0.11
HSPG2-201ENST00000374673 C1QBPQ07021 282 aaKnown RBP15.73■□□□□ 0.11
HSPG2-201ENST00000374673 EFHC1Q5JVL4 640 aa15.73■□□□□ 0.11
HSPG2-201ENST00000374673 PARM1Q6UWI2 310 aa15.73■□□□□ 0.11
HSPG2-201ENST00000374673 SLC26A9Q7LBE3 791 aa15.73■□□□□ 0.11
HSPG2-201ENST00000374673 ADAMTS19Q8TE59 1207 aa15.73■□□□□ 0.11
HSPG2-201ENST00000374673 FGF14Q92915 247 aa15.73■□□□□ 0.11
HSPG2-201ENST00000374673 USP13Q92995 863 aaPredicted RBP15.73■□□□□ 0.11
HSPG2-201ENST00000374673 ELSPBP1Q96BH3 223 aa15.73■□□□□ 0.11
HSPG2-201ENST00000374673 FAM149B1Q96BN6 582 aa15.73■□□□□ 0.11
HSPG2-201ENST00000374673 OLA1Q9NTK5 396 aaKnown RBP15.73■□□□□ 0.11
HSPG2-201ENST00000374673 TDP1Q9NUW8 608 aa15.73■□□□□ 0.11
HSPG2-201ENST00000374673 TAS2R14Q9NYV8 317 aa15.73■□□□□ 0.11
HSPG2-201ENST00000374673 ADAM22Q9P0K1 906 aa15.73■□□□□ 0.11
HSPG2-201ENST00000374673 WDR35Q9P2L0 1181 aa15.73■□□□□ 0.11
HSPG2-201ENST00000374673 LIMD1Q9UGP4 676 aa15.73■□□□□ 0.11
HSPG2-201ENST00000374673 ADAMTS1Q9UHI8 967 aa15.73■□□□□ 0.11
HSPG2-201ENST00000374673 NUMBLQ9Y6R0 609 aa15.73■□□□□ 0.11
HSPG2-201ENST00000374673 FAM170AA1A519 330 aa15.72■□□□□ 0.11
HSPG2-201ENST00000374673 HSF2BPO75031 334 aa15.72■□□□□ 0.11
HSPG2-201ENST00000374673 RTN2O75298 545 aa15.72■□□□□ 0.11
HSPG2-201ENST00000374673 FYNP06241 537 aa15.72■□□□□ 0.11
HSPG2-201ENST00000374673 MBL2P11226 248 aaPredicted RBP15.72■□□□□ 0.11
HSPG2-201ENST00000374673 EIF4A3P38919 411 aaKnown RBP15.72■□□□□ 0.11
HSPG2-201ENST00000374673 YWHAZP63104 245 aaKnown RBP15.72■□□□□ 0.11
HSPG2-201ENST00000374673 USP4Q13107 963 aa15.72■□□□□ 0.11
HSPG2-201ENST00000374673 ASTE1Q2TB18 679 aaPredicted RBP15.72■□□□□ 0.11
HSPG2-201ENST00000374673 C2CD6Q53TS8 623 aa15.72■□□□□ 0.11
HSPG2-201ENST00000374673 TANGO2Q6ICL3 276 aa15.72■□□□□ 0.11
HSPG2-201ENST00000374673 MSANTD2Q6P1R3 559 aa15.72■□□□□ 0.11
HSPG2-201ENST00000374673 MCOLN2Q8IZK6 566 aa15.72■□□□□ 0.11
HSPG2-201ENST00000374673 GJD3Q8N144 294 aa15.72■□□□□ 0.11
HSPG2-201ENST00000374673 CELF5Q8N6W0 485 aaKnown RBP15.72■□□□□ 0.11
HSPG2-201ENST00000374673 VCPIP1Q96JH7 1222 aa15.72■□□□□ 0.11
HSPG2-201ENST00000374673 ZFRQ96KR1 1074 aaKnown RBP15.72■□□□□ 0.11
HSPG2-201ENST00000374673 PANX2Q96RD6 677 aa15.72■□□□□ 0.11
HSPG2-201ENST00000374673 CHP1Q99653 195 aa15.72■□□□□ 0.11
HSPG2-201ENST00000374673 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.72■□□□□ 0.11
HSPG2-201ENST00000374673 NACA2Q9H009 215 aa15.72■□□□□ 0.11
HSPG2-201ENST00000374673 SMG9Q9H0W8 520 aaKnown RBP15.72■□□□□ 0.11
HSPG2-201ENST00000374673 ISCUQ9H1K1 167 aa15.72■□□□□ 0.11
HSPG2-201ENST00000374673 KCNK12Q9HB15 430 aa15.72■□□□□ 0.11
HSPG2-201ENST00000374673 POPDC2Q9HBU9 364 aa15.72■□□□□ 0.11
HSPG2-201ENST00000374673 DNMT3LQ9UJW3 386 aa15.72■□□□□ 0.11
HSPG2-201ENST00000374673 NUDT5Q9UKK9 219 aa15.72■□□□□ 0.11
HSPG2-201ENST00000374673 MYO10Q9HD67 2058 aa15.72■□□□□ 0.11
HSPG2-201ENST00000374673 C5orf42Q9H799 3197 aa15.71■□□□□ 0.11
HSPG2-201ENST00000374673 A0A087X0T9 212 aa15.71■□□□□ 0.11
HSPG2-201ENST00000374673 HEPACAM2A8MVW5 462 aa15.71■□□□□ 0.11
HSPG2-201ENST00000374673 GOLGA6L6A8MZA4 724 aa15.71■□□□□ 0.11
HSPG2-201ENST00000374673 DPYSL4O14531 572 aa15.71■□□□□ 0.11
HSPG2-201ENST00000374673 DAB1O75553 588 aa15.71■□□□□ 0.11
HSPG2-201ENST00000374673 TBX18O95935 607 aa15.71■□□□□ 0.11
HSPG2-201ENST00000374673 FAM228BP0C875 321 aa15.71■□□□□ 0.11
HSPG2-201ENST00000374673 FECHP22830 423 aa15.71■□□□□ 0.11
HSPG2-201ENST00000374673 VIPR2P41587 438 aa15.71■□□□□ 0.11
HSPG2-201ENST00000374673 ZNF77Q15935 545 aa15.71■□□□□ 0.11
HSPG2-201ENST00000374673 C10orf120Q5SQS8 335 aa15.71■□□□□ 0.11
HSPG2-201ENST00000374673 FAM102AQ5T9C2 384 aaPredicted RBP15.71■□□□□ 0.11
HSPG2-201ENST00000374673 RSRC2Q7L4I2 434 aaKnown RBP15.71■□□□□ 0.11
HSPG2-201ENST00000374673 DDX42Q86XP3 938 aaKnown RBP eCLIP15.71■□□□□ 0.11
HSPG2-201ENST00000374673 SPC24Q8NBT2 197 aa15.71■□□□□ 0.11
HSPG2-201ENST00000374673 RNF139Q8WU17 664 aa15.71■□□□□ 0.11
HSPG2-201ENST00000374673 DEPDC1BQ8WUY9 529 aa15.71■□□□□ 0.11
HSPG2-201ENST00000374673 EDEM1Q92611 657 aa15.71■□□□□ 0.11
HSPG2-201ENST00000374673 KHSRPQ92945 711 aaKnown RBP eCLIP15.71■□□□□ 0.11
HSPG2-201ENST00000374673 RSPRY1Q96DX4 576 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms