RNA–Protein interactions for RNA: ENST00000374043.6

PACSIN1-202, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 1 (best) BASIC

Gene PACSIN1, Length 4,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-202ENST00000374043 CCDC142Q17RM4 750 aa12.25□□□□□ -0.45
PACSIN1-202ENST00000374043 CTU1Q7Z7A3 348 aaKnown RBP12.25□□□□□ -0.45
PACSIN1-202ENST00000374043 NSMCE1Q8WV22 266 aa12.25□□□□□ -0.45
PACSIN1-202ENST00000374043 TRIM56Q9BRZ2 755 aaKnown RBP12.25□□□□□ -0.45
PACSIN1-202ENST00000374043 RNF39Q9H2S5 420 aa12.25□□□□□ -0.45
PACSIN1-202ENST00000374043 VTA1Q9NP79 307 aa12.25□□□□□ -0.45
PACSIN1-202ENST00000374043 ARMCX1Q9P291 453 aa12.25□□□□□ -0.45
PACSIN1-202ENST00000374043 NRAPQ86VF7 1730 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 APOC4-APOC2K7ER74 178 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 B4GALT4O60513 344 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 APOC2P02655 101 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 USP17L7P0C7H9 530 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 GOT1P17174 413 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 GARSP41250 739 aaKnown RBP12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 KCNJ2P63252 427 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 SLC6A3Q01959 620 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 PRPSAP1Q14558 356 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 PIGZQ86VD9 579 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 IPMKQ8NFU5 416 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 CDHR5Q9HBB8 845 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 SHOC2Q9UQ13 582 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 GRIN3BO60391 1043 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 PMPCBO75439 489 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 C22orf31O95567 290 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 SNRPAP09012 282 aaKnown RBP12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 ATICP31939 592 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 BCAT1P54687 386 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 DCAF4L1Q3SXM0 396 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 SV2CQ496J9 727 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 BTBD8Q5XKL5 378 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 ILDR2Q71H61 639 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 LONP2Q86WA8 852 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 GBP7Q8N8V2 638 aaPredicted RBP12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 TFB1MQ8WVM0 346 aaKnown RBP12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 PABPC5Q96DU9 382 aaKnown RBP12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 PGLYRP2Q96PD5 576 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 OSBPL7Q9BZF2 842 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 USH1CQ9Y6N9 552 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 WDR27A2RRH5 827 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 C2orf71A6NGG8 1288 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 DNM1LO00429 736 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 TSPAN1O60635 241 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 CILPO75339 1184 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 HSPA4LO95757 839 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 JCHAINP01591 159 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 COPS2P61201 443 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 STILQ15468 1287 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 CA9Q16790 459 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 SLC25A41Q8N5S1 370 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 OR6P1Q8NGX9 317 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 PDCD6IPQ8WUM4 868 aaKnown RBP12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 CD101Q93033 1021 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 BHMTQ93088 406 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 FAM161BQ96MY7 647 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 FSD1LQ9BXM9 530 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 MAGEB5Q9BZ81 275 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 SIX4Q9UIU6 781 aa12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.24□□□□□ -0.45
PACSIN1-202ENST00000374043 SCN9AQ15858 1988 aa12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 ECM29Q5VYK3 1845 aa12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 SNX3O60493 162 aa12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 PDHA1P08559 390 aa12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 IQCF3P0C7M6 154 aa12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 ZNF143P52747 638 aaPredicted RBP12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 FAM117BQ6P1L5 589 aa12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 BZW1Q7L1Q6 419 aaKnown RBP12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 NLRP9Q7RTR0 991 aa12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 MIB1Q86YT6 1006 aa12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 COLGALT1Q8NBJ5 622 aa12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 STAMBPL1Q96FJ0 436 aa12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 SYT11Q9BT88 431 aa12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 SPON2Q9BUD6 331 aa12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 ACSS2Q9NR19 701 aa12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 UPP2O95045 317 aa12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 SERPINB6P35237 376 aa12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 OR1G1P47890 313 aa12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 SCNN1GP51170 649 aa12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 POU5F1Q01860 360 aaKnown RBP12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 BST2Q10589 180 aaKnown RBP12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 THOC5Q13769 683 aaKnown RBP12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 TAF11Q15544 211 aa12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 KYAT1Q16773 422 aa12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 BBS12Q6ZW61 710 aa12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 ANKS1BQ7Z6G8 1248 aa12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 TTC39CQ8N584 583 aa12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 KAT2BQ92831 832 aa12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 MAGEB18Q96M61 343 aa12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 TTC1Q99614 292 aa12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 FZD8Q9H461 694 aa12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 TMPRSS4Q9NRS4 437 aa12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 SENP1Q9P0U3 644 aa12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 SLC17A7Q9P2U7 560 aa12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 MTA2O94776 668 aa12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 STBD1O95210 358 aa12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 AVPR1AP37288 418 aa12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 GLRBP48167 497 aa12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 HADHBP55084 474 aaKnown RBP12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 CCL14Q16627 93 aa12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 ZNF618Q5T7W0 954 aa12.23□□□□□ -0.45
PACSIN1-202ENST00000374043 ATG16L1Q676U5 607 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms