RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 SRP72O76094 671 aaKnown RBP10.11□□□□□ -0.79
COL4A6-202ENST00000372216 STAU1O95793 577 aaKnown RBP10.11□□□□□ -0.79
COL4A6-202ENST00000372216 AGTP01019 485 aa10.11□□□□□ -0.79
COL4A6-202ENST00000372216 CAMK2GQ13555 558 aaPredicted RBP10.11□□□□□ -0.79
COL4A6-202ENST00000372216 C16orf62Q7Z3J2 963 aa10.11□□□□□ -0.79
COL4A6-202ENST00000372216 KRT77Q7Z794 578 aa10.11□□□□□ -0.79
COL4A6-202ENST00000372216 ADCK1Q86TW2 530 aa10.11□□□□□ -0.79
COL4A6-202ENST00000372216 SLC4A9Q96Q91 983 aa10.11□□□□□ -0.79
COL4A6-202ENST00000372216 KBTBD4Q9NVX7 518 aa10.11□□□□□ -0.79
COL4A6-202ENST00000372216 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.11□□□□□ -0.79
COL4A6-202ENST00000372216 ZBTB39O15060 712 aa10.11□□□□□ -0.79
COL4A6-202ENST00000372216 FEN1P39748 380 aaKnown RBP10.11□□□□□ -0.79
COL4A6-202ENST00000372216 SERPINB4P48594 390 aa10.11□□□□□ -0.79
COL4A6-202ENST00000372216 INHBEP58166 350 aa10.11□□□□□ -0.79
COL4A6-202ENST00000372216 RHOAP61586 193 aa10.11□□□□□ -0.79
COL4A6-202ENST00000372216 VSNL1P62760 191 aa10.11□□□□□ -0.79
COL4A6-202ENST00000372216 STX3Q13277 289 aa10.11□□□□□ -0.79
COL4A6-202ENST00000372216 MIIPQ5JXC2 388 aa10.11□□□□□ -0.79
COL4A6-202ENST00000372216 GALNT4Q8N4A0 578 aa10.11□□□□□ -0.79
COL4A6-202ENST00000372216 ENGASEQ8NFI3 743 aa10.11□□□□□ -0.79
COL4A6-202ENST00000372216 ZSWIM1Q9BR11 485 aa10.11□□□□□ -0.79
COL4A6-202ENST00000372216 WWP1Q9H0M0 922 aa10.11□□□□□ -0.79
COL4A6-202ENST00000372216 THG1LQ9NWX6 298 aaKnown RBP10.11□□□□□ -0.79
COL4A6-202ENST00000372216 UTP6Q9NYH9 597 aaKnown RBP10.11□□□□□ -0.79
COL4A6-202ENST00000372216 NEURL4Q96JN8 1562 aa10.11□□□□□ -0.79
COL4A6-202ENST00000372216 TCP11X1B4DZS4 312 aa10.11□□□□□ -0.79
COL4A6-202ENST00000372216 NDUFS2O75306 463 aa10.11□□□□□ -0.79
COL4A6-202ENST00000372216 HOXC6P09630 235 aa10.11□□□□□ -0.79
COL4A6-202ENST00000372216 FNTAP49354 379 aa10.11□□□□□ -0.79
COL4A6-202ENST00000372216 ABCE1P61221 599 aaKnown RBP10.11□□□□□ -0.79
COL4A6-202ENST00000372216 ARHGAP17Q68EM7 881 aa10.11□□□□□ -0.79
COL4A6-202ENST00000372216 RBM23Q86U06 439 aaKnown RBP10.11□□□□□ -0.79
COL4A6-202ENST00000372216 ELMO3Q96BJ8 720 aa10.11□□□□□ -0.79
COL4A6-202ENST00000372216 STAMBPL1Q96FJ0 436 aa10.11□□□□□ -0.79
COL4A6-202ENST00000372216 ZNF518BQ9C0D4 1074 aa10.11□□□□□ -0.79
COL4A6-202ENST00000372216 TRMT6Q9UJA5 497 aaKnown RBP10.11□□□□□ -0.79
COL4A6-202ENST00000372216 AAR2Q9Y312 384 aaKnown RBP10.11□□□□□ -0.79
COL4A6-202ENST00000372216 SPAG6O75602 509 aa10.11□□□□□ -0.79
COL4A6-202ENST00000372216 SH3BGRP55822 239 aaPredicted RBP10.11□□□□□ -0.79
COL4A6-202ENST00000372216 PTPN11Q06124 597 aaPredicted RBP10.11□□□□□ -0.79
COL4A6-202ENST00000372216 GRIK5Q16478 980 aa10.11□□□□□ -0.79
COL4A6-202ENST00000372216 HIST2H2ACQ16777 129 aaPredicted RBP10.11□□□□□ -0.79
COL4A6-202ENST00000372216 PPM1LQ5SGD2 360 aa10.11□□□□□ -0.79
COL4A6-202ENST00000372216 CELF3Q5SZQ8 465 aaKnown RBP10.11□□□□□ -0.79
COL4A6-202ENST00000372216 HIST2H2AA3Q6FI13 130 aa10.11□□□□□ -0.79
COL4A6-202ENST00000372216 USP38Q8NB14 1042 aa10.11□□□□□ -0.79
COL4A6-202ENST00000372216 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.11□□□□□ -0.79
COL4A6-202ENST00000372216 AP4E1Q9UPM8 1137 aa10.11□□□□□ -0.79
COL4A6-202ENST00000372216 CDYLQ9Y232 598 aa10.11□□□□□ -0.79
COL4A6-202ENST00000372216 SNCAIPQ9Y6H5 919 aa10.11□□□□□ -0.79
COL4A6-202ENST00000372216 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.1□□□□□ -0.79
COL4A6-202ENST00000372216 WTIPA6NIX2 430 aaPredicted RBP10.1□□□□□ -0.79
COL4A6-202ENST00000372216 SMAPO00193 183 aa10.1□□□□□ -0.79
COL4A6-202ENST00000372216 CBX4O00257 560 aa10.1□□□□□ -0.79
COL4A6-202ENST00000372216 FKTNO75072 461 aa10.1□□□□□ -0.79
COL4A6-202ENST00000372216 TRIM16O95361 564 aa10.1□□□□□ -0.79
COL4A6-202ENST00000372216 KRT4P19013 534 aa10.1□□□□□ -0.79
COL4A6-202ENST00000372216 GTF2E2P29084 291 aaKnown RBP10.1□□□□□ -0.79
COL4A6-202ENST00000372216 KRT20P35900 424 aa10.1□□□□□ -0.79
COL4A6-202ENST00000372216 SP3Q02447 781 aa10.1□□□□□ -0.79
COL4A6-202ENST00000372216 NTRK3Q16288 839 aa10.1□□□□□ -0.79
COL4A6-202ENST00000372216 RGMBQ6NW40 437 aa10.1□□□□□ -0.79
COL4A6-202ENST00000372216 PTF1AQ7RTS3 328 aa10.1□□□□□ -0.79
COL4A6-202ENST00000372216 PAWRQ96IZ0 340 aaKnown RBP10.1□□□□□ -0.79
COL4A6-202ENST00000372216 TINF2Q9BSI4 451 aa10.1□□□□□ -0.79
COL4A6-202ENST00000372216 ATXN3LQ9H3M9 355 aa10.1□□□□□ -0.79
COL4A6-202ENST00000372216 PSD3Q9NYI0 1048 aa10.1□□□□□ -0.79
COL4A6-202ENST00000372216 CASZ1Q86V15 1759 aa10.1□□□□□ -0.79
COL4A6-202ENST00000372216 A0A087X0T9 212 aa10.1□□□□□ -0.79
COL4A6-202ENST00000372216 F8W810 466 aa10.1□□□□□ -0.79
COL4A6-202ENST00000372216 KRT8P05787 483 aa10.1□□□□□ -0.79
COL4A6-202ENST00000372216 NDST1P52848 882 aa10.1□□□□□ -0.79
COL4A6-202ENST00000372216 IKBKEQ14164 716 aa10.1□□□□□ -0.79
COL4A6-202ENST00000372216 MOB2Q70IA6 237 aa10.1□□□□□ -0.79
COL4A6-202ENST00000372216 NT5DC3Q86UY8 548 aa10.1□□□□□ -0.79
COL4A6-202ENST00000372216 FAM163AQ96GL9 167 aaPredicted RBP10.1□□□□□ -0.79
COL4A6-202ENST00000372216 KLF6Q99612 283 aaPredicted RBP10.1□□□□□ -0.79
COL4A6-202ENST00000372216 NPHS2Q9NP85 383 aa10.1□□□□□ -0.79
COL4A6-202ENST00000372216 BARX2Q9UMQ3 279 aaPredicted RBP10.1□□□□□ -0.79
COL4A6-202ENST00000372216 USP18Q9UMW8 372 aa10.1□□□□□ -0.79
COL4A6-202ENST00000372216 USP20Q9Y2K6 914 aa10.1□□□□□ -0.79
COL4A6-202ENST00000372216 IL10P22301 178 aa10.1□□□□□ -0.79
COL4A6-202ENST00000372216 NFE2Q16621 373 aaPredicted RBP10.1□□□□□ -0.79
COL4A6-202ENST00000372216 LRIG3Q6UXM1 1119 aa10.1□□□□□ -0.79
COL4A6-202ENST00000372216 RIN2Q8WYP3 895 aaPredicted RBP10.1□□□□□ -0.79
COL4A6-202ENST00000372216 EDEM1Q92611 657 aa10.1□□□□□ -0.79
COL4A6-202ENST00000372216 PADI4Q9UM07 663 aa10.1□□□□□ -0.79
COL4A6-202ENST00000372216 GSTM1P09488 218 aa10.1□□□□□ -0.79
COL4A6-202ENST00000372216 RARRES1P49788 294 aa10.1□□□□□ -0.79
COL4A6-202ENST00000372216 CLEC16AQ2KHT3 1053 aa10.1□□□□□ -0.79
COL4A6-202ENST00000372216 FNDC3BQ53EP0 1204 aaKnown RBP10.1□□□□□ -0.79
COL4A6-202ENST00000372216 CEP78Q5JTW2 689 aa10.1□□□□□ -0.79
COL4A6-202ENST00000372216 GPR142Q7Z601 462 aa10.1□□□□□ -0.79
COL4A6-202ENST00000372216 FAM131BQ86XD5 332 aa10.1□□□□□ -0.79
COL4A6-202ENST00000372216 PLD3Q8IV08 490 aa10.1□□□□□ -0.79
COL4A6-202ENST00000372216 UNC45BQ8IWX7 931 aa10.1□□□□□ -0.79
COL4A6-202ENST00000372216 SLC20A1Q8WUM9 679 aa10.1□□□□□ -0.79
COL4A6-202ENST00000372216 ANKS1AQ92625 1134 aa10.1□□□□□ -0.79
COL4A6-202ENST00000372216 COPS5Q92905 334 aa10.1□□□□□ -0.79
COL4A6-202ENST00000372216 TATDN2Q93075 761 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms