RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 PNPLA4P41247 253 aa24.66■■□□□ 1.54
RAPGEF1-203ENST00000372195 TRIP4Q15650 581 aaPredicted RBP24.66■■□□□ 1.54
RAPGEF1-203ENST00000372195 SLC44A4Q53GD3 710 aa24.66■■□□□ 1.54
RAPGEF1-203ENST00000372195 MFSD4BQ5TF39 518 aa24.66■■□□□ 1.54
RAPGEF1-203ENST00000372195 CYP2W1Q8TAV3 490 aa24.66■■□□□ 1.54
RAPGEF1-203ENST00000372195 EDEM1Q92611 657 aa24.66■■□□□ 1.54
RAPGEF1-203ENST00000372195 IQSEC2Q5JU85 1478 aa24.66■■□□□ 1.54
RAPGEF1-203ENST00000372195 KATNA1O75449 491 aa24.65■■□□□ 1.54
RAPGEF1-203ENST00000372195 INTS5Q6P9B9 1019 aaKnown RBP24.65■■□□□ 1.54
RAPGEF1-203ENST00000372195 VPS37AQ8NEZ2 397 aa24.65■■□□□ 1.54
RAPGEF1-203ENST00000372195 TMEM176AQ96HP8 235 aa24.65■■□□□ 1.54
RAPGEF1-203ENST00000372195 PXMP2Q9NR77 195 aa24.65■■□□□ 1.54
RAPGEF1-203ENST00000372195 UTP6Q9NYH9 597 aaKnown RBP24.65■■□□□ 1.54
RAPGEF1-203ENST00000372195 A0A0U1RQJ8 604 aa24.65■■□□□ 1.54
RAPGEF1-203ENST00000372195 ALOX15P16050 662 aaPredicted RBP24.65■■□□□ 1.54
RAPGEF1-203ENST00000372195 CALB2P22676 271 aa24.65■■□□□ 1.54
RAPGEF1-203ENST00000372195 CAP2P40123 477 aa24.65■■□□□ 1.54
RAPGEF1-203ENST00000372195 CAPZA2P47755 286 aa24.65■■□□□ 1.54
RAPGEF1-203ENST00000372195 POU6F1Q14863 301 aa24.65■■□□□ 1.54
RAPGEF1-203ENST00000372195 PDK2Q15119 407 aa24.65■■□□□ 1.54
RAPGEF1-203ENST00000372195 LY6KQ17RY6 165 aa24.65■■□□□ 1.54
RAPGEF1-203ENST00000372195 DEFB107AQ8IZN7 70 aa24.65■■□□□ 1.54
RAPGEF1-203ENST00000372195 DDHD1Q8NEL9 900 aa24.65■■□□□ 1.54
RAPGEF1-203ENST00000372195 A0A087X0B3 334 aa24.65■■□□□ 1.54
RAPGEF1-203ENST00000372195 IFI35P80217 286 aaPredicted RBP24.65■■□□□ 1.54
RAPGEF1-203ENST00000372195 HIST2H2ACQ16777 129 aaPredicted RBP24.65■■□□□ 1.54
RAPGEF1-203ENST00000372195 HIST2H2AA3Q6FI13 130 aa24.65■■□□□ 1.54
RAPGEF1-203ENST00000372195 CFAP99D6REC4 459 aa24.65■■□□□ 1.54
RAPGEF1-203ENST00000372195 APOA4P06727 396 aa24.65■■□□□ 1.54
RAPGEF1-203ENST00000372195 MTFR1Q15390 333 aa24.65■■□□□ 1.54
RAPGEF1-203ENST00000372195 Q4G0T1 1027 aa24.65■■□□□ 1.54
RAPGEF1-203ENST00000372195 MRNIPQ6NTE8 343 aa24.65■■□□□ 1.54
RAPGEF1-203ENST00000372195 MTERF3Q96E29 417 aa24.65■■□□□ 1.54
RAPGEF1-203ENST00000372195 HIC2Q96JB3 615 aa24.65■■□□□ 1.54
RAPGEF1-203ENST00000372195 PROSCO94903 275 aa24.65■■□□□ 1.54
RAPGEF1-203ENST00000372195 MBL2P11226 248 aaPredicted RBP24.65■■□□□ 1.54
RAPGEF1-203ENST00000372195 CDKAL1Q5VV42 579 aa24.65■■□□□ 1.54
RAPGEF1-203ENST00000372195 PRCCQ92733 491 aaPredicted RBP24.65■■□□□ 1.54
RAPGEF1-203ENST00000372195 HNRNPRO43390 633 aaKnown RBP24.64■■□□□ 1.54
RAPGEF1-203ENST00000372195 HSMCR30P0CW71 290 aa24.64■■□□□ 1.54
RAPGEF1-203ENST00000372195 CPA3P15088 417 aa24.64■■□□□ 1.54
RAPGEF1-203ENST00000372195 SLC1A6P48664 564 aa24.64■■□□□ 1.54
RAPGEF1-203ENST00000372195 TRAF2Q12933 501 aa24.64■■□□□ 1.54
RAPGEF1-203ENST00000372195 LRRC40Q9H9A6 602 aa24.64■■□□□ 1.54
RAPGEF1-203ENST00000372195 SETBP1Q9Y6X0 1596 aa24.64■■□□□ 1.54
RAPGEF1-203ENST00000372195 B3GALNT2Q8NCR0 500 aa24.64■■□□□ 1.54
RAPGEF1-203ENST00000372195 GOLGA8TH3BQL2 631 aa24.64■■□□□ 1.54
RAPGEF1-203ENST00000372195 AGKQ53H12 422 aa24.64■■□□□ 1.54
RAPGEF1-203ENST00000372195 SH3GL2Q99962 352 aa24.64■■□□□ 1.54
RAPGEF1-203ENST00000372195 GPAMQ9HCL2 828 aa24.64■■□□□ 1.54
RAPGEF1-203ENST00000372195 H2AFYO75367 372 aaKnown RBP24.64■■□□□ 1.53
RAPGEF1-203ENST00000372195 CDC25CP30307 473 aa24.64■■□□□ 1.53
RAPGEF1-203ENST00000372195 KPNB1Q14974 876 aaKnown RBP24.64■■□□□ 1.53
RAPGEF1-203ENST00000372195 CLTCQ00610 1675 aaKnown RBP24.64■■□□□ 1.53
RAPGEF1-203ENST00000372195 CELF2O95319 508 aaKnown RBP24.64■■□□□ 1.53
RAPGEF1-203ENST00000372195 MMRN1Q13201 1228 aa24.64■■□□□ 1.53
RAPGEF1-203ENST00000372195 ZNF614Q8N883 585 aa24.64■■□□□ 1.53
RAPGEF1-203ENST00000372195 SEPHS2Q99611 448 aa24.64■■□□□ 1.53
RAPGEF1-203ENST00000372195 DCLK3Q9C098 648 aa24.64■■□□□ 1.53
RAPGEF1-203ENST00000372195 DDTLA6NHG4 134 aaPredicted RBP24.63■■□□□ 1.53
RAPGEF1-203ENST00000372195 RRN3P2A6NIE6 340 aa24.63■■□□□ 1.53
RAPGEF1-203ENST00000372195 VPS26AO75436 327 aa24.63■■□□□ 1.53
RAPGEF1-203ENST00000372195 LRG1P02750 347 aa24.63■■□□□ 1.53
RAPGEF1-203ENST00000372195 FAM86B2P0C5J1 330 aa24.63■■□□□ 1.53
RAPGEF1-203ENST00000372195 ALFQ53S48 1182 aa24.63■■□□□ 1.53
RAPGEF1-203ENST00000372195 RNF19AQ9NV58 838 aa24.63■■□□□ 1.53
RAPGEF1-203ENST00000372195 SNTG2Q9NY99 539 aa24.63■■□□□ 1.53
RAPGEF1-203ENST00000372195 GTF2A1LQ9UNN4 478 aa24.63■■□□□ 1.53
RAPGEF1-203ENST00000372195 A0A087WZ62 844 aa24.63■■□□□ 1.53
RAPGEF1-203ENST00000372195 PLA2G6O60733 806 aa24.63■■□□□ 1.53
RAPGEF1-203ENST00000372195 GSSP48637 474 aa24.63■■□□□ 1.53
RAPGEF1-203ENST00000372195 SLC11A2P49281 568 aa24.63■■□□□ 1.53
RAPGEF1-203ENST00000372195 FDXACB1Q9BRP7 624 aaPredicted RBP24.63■■□□□ 1.53
RAPGEF1-203ENST00000372195 RPS7P62081 194 aaKnown RBP24.63■■□□□ 1.53
RAPGEF1-203ENST00000372195 ZCCHC23Q6ZST2 131 aa24.63■■□□□ 1.53
RAPGEF1-203ENST00000372195 RNF148Q8N7C7 305 aa24.63■■□□□ 1.53
RAPGEF1-203ENST00000372195 ACOX2Q99424 681 aa24.63■■□□□ 1.53
RAPGEF1-203ENST00000372195 KCTD14Q9BQ13 255 aaPredicted RBP24.63■■□□□ 1.53
RAPGEF1-203ENST00000372195 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.63■■□□□ 1.53
RAPGEF1-203ENST00000372195 C1orf167Q5SNV9 1468 aa24.63■■□□□ 1.53
RAPGEF1-203ENST00000372195 WEE1P30291 646 aa24.63■■□□□ 1.53
RAPGEF1-203ENST00000372195 N4BP2L1Q5TBK1 243 aaPredicted RBP24.63■■□□□ 1.53
RAPGEF1-203ENST00000372195 EFL1Q7Z2Z2 1120 aaKnown RBP24.63■■□□□ 1.53
RAPGEF1-203ENST00000372195 ROGDIQ9GZN7 287 aa24.63■■□□□ 1.53
RAPGEF1-203ENST00000372195 CTNNAL1Q9UBT7 734 aa24.63■■□□□ 1.53
RAPGEF1-203ENST00000372195 PRLRP16471 622 aa24.63■■□□□ 1.53
RAPGEF1-203ENST00000372195 HSPA13P48723 471 aa24.63■■□□□ 1.53
RAPGEF1-203ENST00000372195 ATP6AP1LQ52LC2 224 aa24.63■■□□□ 1.53
RAPGEF1-203ENST00000372195 SLC26A11Q86WA9 606 aa24.63■■□□□ 1.53
RAPGEF1-203ENST00000372195 RTFDC1Q9BY42 306 aaPredicted RBP24.63■■□□□ 1.53
RAPGEF1-203ENST00000372195 ARMCX1Q9P291 453 aa24.63■■□□□ 1.53
RAPGEF1-203ENST00000372195 SEC23AQ15436 765 aa24.62■■□□□ 1.53
RAPGEF1-203ENST00000372195 LRRC8DQ7L1W4 858 aa24.62■■□□□ 1.53
RAPGEF1-203ENST00000372195 UBE2OQ9C0C9 1292 aaKnown RBP24.62■■□□□ 1.53
RAPGEF1-203ENST00000372195 ACAT1P24752 427 aaKnown RBP24.62■■□□□ 1.53
RAPGEF1-203ENST00000372195 SARSP49591 514 aaKnown RBP24.62■■□□□ 1.53
RAPGEF1-203ENST00000372195 MAPK10P53779 464 aa24.62■■□□□ 1.53
RAPGEF1-203ENST00000372195 KBTBD12Q3ZCT8 623 aa24.62■■□□□ 1.53
RAPGEF1-203ENST00000372195 RIPOR1Q6ZS17 1223 aa24.62■■□□□ 1.53
RAPGEF1-203ENST00000372195 VANGL2Q9ULK5 521 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms