RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 CCDC130P13994 396 aa14.49□□□□□ -0.09
RAPGEF1-202ENST00000372190 TYK2P29597 1187 aa14.49□□□□□ -0.09
RAPGEF1-202ENST00000372190 DHX34Q14147 1143 aaKnown RBP14.49□□□□□ -0.09
RAPGEF1-202ENST00000372190 TFDP2Q14188 446 aa14.49□□□□□ -0.09
RAPGEF1-202ENST00000372190 TRIM72Q6ZMU5 477 aa14.49□□□□□ -0.09
RAPGEF1-202ENST00000372190 FRMD5Q7Z6J6 570 aa14.49□□□□□ -0.09
RAPGEF1-202ENST00000372190 TRIM74Q86UV6 250 aa14.49□□□□□ -0.09
RAPGEF1-202ENST00000372190 TRIM73Q86UV7 250 aa14.49□□□□□ -0.09
RAPGEF1-202ENST00000372190 IFNEQ86WN2 208 aa14.49□□□□□ -0.09
RAPGEF1-202ENST00000372190 LRRC17Q8N6Y2 441 aa14.49□□□□□ -0.09
RAPGEF1-202ENST00000372190 SPATA4Q8NEY3 305 aa14.49□□□□□ -0.09
RAPGEF1-202ENST00000372190 MRPL48Q96GC5 212 aaKnown RBP14.49□□□□□ -0.09
RAPGEF1-202ENST00000372190 RBBP8Q99708 897 aa14.49□□□□□ -0.09
RAPGEF1-202ENST00000372190 TCN1P20061 433 aaPredicted RBP14.49□□□□□ -0.09
RAPGEF1-202ENST00000372190 STILQ15468 1287 aa14.49□□□□□ -0.09
RAPGEF1-202ENST00000372190 IRGCQ6NXR0 463 aa14.49□□□□□ -0.09
RAPGEF1-202ENST00000372190 ANKS3Q6ZW76 656 aa14.49□□□□□ -0.09
RAPGEF1-202ENST00000372190 WNT8AQ9H1J5 351 aa14.49□□□□□ -0.09
RAPGEF1-202ENST00000372190 EHD3Q9NZN3 535 aa14.49□□□□□ -0.09
RAPGEF1-202ENST00000372190 ZNF180Q9UJW8 692 aa14.49□□□□□ -0.09
RAPGEF1-202ENST00000372190 CDYLQ9Y232 598 aa14.49□□□□□ -0.09
RAPGEF1-202ENST00000372190 C2CD2Q9Y426 696 aa14.49□□□□□ -0.09
RAPGEF1-202ENST00000372190 PCDHB12Q9Y5F1 795 aa14.49□□□□□ -0.09
RAPGEF1-202ENST00000372190 HEY1Q9Y5J3 304 aa14.49□□□□□ -0.09
RAPGEF1-202ENST00000372190 FKBP6O75344 327 aa14.49□□□□□ -0.09
RAPGEF1-202ENST00000372190 ODC1P11926 461 aa14.49□□□□□ -0.09
RAPGEF1-202ENST00000372190 CCT8P50990 548 aa14.49□□□□□ -0.09
RAPGEF1-202ENST00000372190 KCNB1Q14721 858 aa14.49□□□□□ -0.09
RAPGEF1-202ENST00000372190 FKBP1CQ5VVH2 108 aa14.49□□□□□ -0.09
RAPGEF1-202ENST00000372190 PCSK1NQ9UHG2 260 aa14.49□□□□□ -0.09
RAPGEF1-202ENST00000372190 SLC16A3O15427 465 aaKnown RBP14.49□□□□□ -0.09
RAPGEF1-202ENST00000372190 RAB25P57735 213 aa14.49□□□□□ -0.09
RAPGEF1-202ENST00000372190 TAF2Q6P1X5 1199 aa14.49□□□□□ -0.09
RAPGEF1-202ENST00000372190 AKAP14Q86UN6 197 aa14.49□□□□□ -0.09
RAPGEF1-202ENST00000372190 RBBP8NLQ8NC74 664 aaPredicted RBP14.49□□□□□ -0.09
RAPGEF1-202ENST00000372190 IP6K2Q9UHH9 426 aa14.49□□□□□ -0.09
RAPGEF1-202ENST00000372190 APOL1O14791 398 aa14.48□□□□□ -0.09
RAPGEF1-202ENST00000372190 APOL3O95236 402 aa14.48□□□□□ -0.09
RAPGEF1-202ENST00000372190 PDIA2Q13087 525 aaKnown RBP14.48□□□□□ -0.09
RAPGEF1-202ENST00000372190 NCOA4Q13772 614 aa14.48□□□□□ -0.09
RAPGEF1-202ENST00000372190 MTF1Q14872 753 aa14.48□□□□□ -0.09
RAPGEF1-202ENST00000372190 ACAP2Q15057 778 aa14.48□□□□□ -0.09
RAPGEF1-202ENST00000372190 E4F1Q66K89 784 aaPredicted RBP14.48□□□□□ -0.09
RAPGEF1-202ENST00000372190 CCDC137Q6PK04 289 aaKnown RBP14.48□□□□□ -0.09
RAPGEF1-202ENST00000372190 ADGRA1Q86SQ6 560 aa14.48□□□□□ -0.09
RAPGEF1-202ENST00000372190 LRRC1Q9BTT6 524 aa14.48□□□□□ -0.09
RAPGEF1-202ENST00000372190 KLK14Q9P0G3 267 aa14.48□□□□□ -0.09
RAPGEF1-202ENST00000372190 MSH4O15457 936 aa14.48□□□□□ -0.09
RAPGEF1-202ENST00000372190 COPAP53621 1224 aa14.48□□□□□ -0.09
RAPGEF1-202ENST00000372190 DGKKQ5KSL6 1271 aa14.48□□□□□ -0.09
RAPGEF1-202ENST00000372190 ILDR1Q86SU0 546 aaPredicted RBP14.48□□□□□ -0.09
RAPGEF1-202ENST00000372190 LRRC20Q8TCA0 184 aa14.48□□□□□ -0.09
RAPGEF1-202ENST00000372190 CCSER1Q9C0I3 900 aa14.48□□□□□ -0.09
RAPGEF1-202ENST00000372190 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.48□□□□□ -0.09
RAPGEF1-202ENST00000372190 HBS1LQ9Y450 684 aaKnown RBP14.48□□□□□ -0.09
RAPGEF1-202ENST00000372190 KANSL1LA0AUZ9 987 aa14.48□□□□□ -0.09
RAPGEF1-202ENST00000372190 NPR2P20594 1047 aa14.48□□□□□ -0.09
RAPGEF1-202ENST00000372190 PSMB9P28065 219 aa14.48□□□□□ -0.09
RAPGEF1-202ENST00000372190 LRRC74AQ0VAA2 488 aa14.48□□□□□ -0.09
RAPGEF1-202ENST00000372190 SNRNP35Q16560 246 aaKnown RBP14.48□□□□□ -0.09
RAPGEF1-202ENST00000372190 C15orf59Q2T9L4 293 aaPredicted RBP14.48□□□□□ -0.09
RAPGEF1-202ENST00000372190 C6orf10Q5SRN2 563 aa14.48□□□□□ -0.09
RAPGEF1-202ENST00000372190 C17orf80Q9BSJ5 609 aa14.48□□□□□ -0.09
RAPGEF1-202ENST00000372190 PPCSQ9HAB8 311 aa14.48□□□□□ -0.09
RAPGEF1-202ENST00000372190 DFFAO00273 331 aa14.48□□□□□ -0.09
RAPGEF1-202ENST00000372190 VTNP04004 478 aa14.48□□□□□ -0.09
RAPGEF1-202ENST00000372190 ATP4AP20648 1035 aa14.48□□□□□ -0.09
RAPGEF1-202ENST00000372190 SHMT1P34896 483 aa14.48□□□□□ -0.09
RAPGEF1-202ENST00000372190 NPEPPSP55786 919 aa14.48□□□□□ -0.09
RAPGEF1-202ENST00000372190 NR1D2Q14995 579 aa14.48□□□□□ -0.09
RAPGEF1-202ENST00000372190 LRRC6Q86X45 466 aa14.48□□□□□ -0.09
RAPGEF1-202ENST00000372190 SIPA1Q96FS4 1042 aa14.48□□□□□ -0.09
RAPGEF1-202ENST00000372190 CCDC115Q96NT0 180 aa14.48□□□□□ -0.09
RAPGEF1-202ENST00000372190 ELOVL6Q9H5J4 265 aa14.48□□□□□ -0.09
RAPGEF1-202ENST00000372190 ZC3H11AO75152 810 aaKnown RBP eCLIP14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 KRT36O76013 467 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 RTN3O95197 1032 aaPredicted RBP14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 URODP06132 367 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 MYBP10242 640 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 GSTT1P30711 240 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 SCTRP47872 440 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 QPRTQ15274 297 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 KIAA0408Q6ZU52 694 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 ZBED8Q8IZ13 594 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 AGR3Q8TD06 166 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 IDI2Q9BXS1 227 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 DNAJC11Q9NVH1 559 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 UBE2QL1A1L167 161 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 POLR2EP19388 210 aaKnown RBP14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 ZNF235Q14590 738 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 SNX30Q5VWJ9 437 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 APOBEC3HQ6NTF7 200 aaKnown RBP14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 JADE3Q92613 823 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 SENP6Q9GZR1 1112 aaPredicted RBP14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 DHX35Q9H5Z1 703 aaKnown RBP14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 EXTL3O43909 919 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 AMHP03971 560 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 FYNP06241 537 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 ZNF23P17027 643 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 PNPLA4P41247 253 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms