RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 CENPTQ96BT3 561 aa14.73□□□□□ -0.05
LDB3-204ENST00000372066 TWNKQ96RR1 684 aa14.73□□□□□ -0.05
LDB3-204ENST00000372066 CPXM1Q96SM3 734 aa14.73□□□□□ -0.05
LDB3-204ENST00000372066 PPP1R16BQ96T49 567 aa14.73□□□□□ -0.05
LDB3-204ENST00000372066 SEMA4AQ9H3S1 761 aa14.73□□□□□ -0.05
LDB3-204ENST00000372066 ASNSD1Q9NWL6 643 aa14.73□□□□□ -0.05
LDB3-204ENST00000372066 BCCIPQ9P287 314 aaKnown RBP eCLIP14.73□□□□□ -0.05
LDB3-204ENST00000372066 LRRD1A4D1F6 860 aa14.72□□□□□ -0.05
LDB3-204ENST00000372066 GOLGA8SH3BPF8 625 aa14.72□□□□□ -0.05
LDB3-204ENST00000372066 RGS16O15492 202 aaPredicted RBP14.72□□□□□ -0.05
LDB3-204ENST00000372066 LRCH4O75427 683 aa14.72□□□□□ -0.05
LDB3-204ENST00000372066 CSDE1O75534 798 aaKnown RBP14.72□□□□□ -0.05
LDB3-204ENST00000372066 ERBB2P04626 1255 aa14.72□□□□□ -0.05
LDB3-204ENST00000372066 HPDP32754 393 aaPredicted RBP14.72□□□□□ -0.05
LDB3-204ENST00000372066 RFC1P35251 1148 aaPredicted RBP14.72□□□□□ -0.05
LDB3-204ENST00000372066 NRIP1P48552 1158 aa14.72□□□□□ -0.05
LDB3-204ENST00000372066 NDST1P52848 882 aa14.72□□□□□ -0.05
LDB3-204ENST00000372066 VCPP55072 806 aaKnown RBP14.72□□□□□ -0.05
LDB3-204ENST00000372066 MAGOHP61326 146 aaKnown RBP14.72□□□□□ -0.05
LDB3-204ENST00000372066 ZBTB6Q15916 424 aa14.72□□□□□ -0.05
LDB3-204ENST00000372066 GSTA5Q7RTV2 222 aa14.72□□□□□ -0.05
LDB3-204ENST00000372066 RNF135Q8IUD6 432 aa14.72□□□□□ -0.05
LDB3-204ENST00000372066 EFHBQ8N7U6 833 aa14.72□□□□□ -0.05
LDB3-204ENST00000372066 HEXIM2Q96MH2 286 aaKnown RBP14.72□□□□□ -0.05
LDB3-204ENST00000372066 ADAM2Q99965 735 aa14.72□□□□□ -0.05
LDB3-204ENST00000372066 PHACTR1Q9C0D0 580 aa14.72□□□□□ -0.05
LDB3-204ENST00000372066 CDC42EP4Q9H3Q1 356 aaKnown RBP14.72□□□□□ -0.05
LDB3-204ENST00000372066 METTL5Q9NRN9 209 aaKnown RBP14.72□□□□□ -0.05
LDB3-204ENST00000372066 CNTN3Q9P232 1028 aa14.72□□□□□ -0.05
LDB3-204ENST00000372066 CYTH4Q9UIA0 394 aa14.72□□□□□ -0.05
LDB3-204ENST00000372066 MUTYHQ9UIF7 546 aa14.72□□□□□ -0.05
LDB3-204ENST00000372066 UBQLN1Q9UMX0 589 aaKnown RBP14.72□□□□□ -0.05
LDB3-204ENST00000372066 ST3GAL5Q9UNP4 418 aa14.72□□□□□ -0.05
LDB3-204ENST00000372066 PCDHB12Q9Y5F1 795 aa14.72□□□□□ -0.05
LDB3-204ENST00000372066 ATXN2Q99700 1313 aaKnown RBP14.71□□□□□ -0.05
LDB3-204ENST00000372066 TTC3P53804 2025 aa14.71□□□□□ -0.05
LDB3-204ENST00000372066 TBKBP1A7MCY6 615 aa14.71□□□□□ -0.05
LDB3-204ENST00000372066 DNALI1O14645 258 aaPredicted RBP14.71□□□□□ -0.05
LDB3-204ENST00000372066 RASGRF2O14827 1237 aa14.71□□□□□ -0.05
LDB3-204ENST00000372066 GPR182O15218 404 aa14.71□□□□□ -0.05
LDB3-204ENST00000372066 TP73O15350 636 aa14.71□□□□□ -0.05
LDB3-204ENST00000372066 MGEA5O60502 916 aa14.71□□□□□ -0.05
LDB3-204ENST00000372066 TCEA3O75764 348 aa14.71□□□□□ -0.05
LDB3-204ENST00000372066 FGFR4P22455 802 aa14.71□□□□□ -0.05
LDB3-204ENST00000372066 KIZQ2M2Z5 673 aa14.71□□□□□ -0.05
LDB3-204ENST00000372066 IZUMO3Q5VZ72 239 aa14.71□□□□□ -0.05
LDB3-204ENST00000372066 HIBCHQ6NVY1 386 aaPredicted RBP14.71□□□□□ -0.05
LDB3-204ENST00000372066 BBS12Q6ZW61 710 aa14.71□□□□□ -0.05
LDB3-204ENST00000372066 B4GALNT4Q76KP1 1039 aa14.71□□□□□ -0.05
LDB3-204ENST00000372066 TAOK1Q7L7X3 1001 aa14.71□□□□□ -0.05
LDB3-204ENST00000372066 ALYREFQ86V81 257 aaKnown RBP14.71□□□□□ -0.05
LDB3-204ENST00000372066 CCDC25Q86WR0 208 aa14.71□□□□□ -0.05
LDB3-204ENST00000372066 ALLCQ8N6M5 410 aa14.71□□□□□ -0.05
LDB3-204ENST00000372066 MSLNLQ96KJ4 702 aa14.71□□□□□ -0.05
LDB3-204ENST00000372066 ZNF560Q96MR9 790 aa14.71□□□□□ -0.05
LDB3-204ENST00000372066 SERPINB12Q96P63 405 aa14.71□□□□□ -0.05
LDB3-204ENST00000372066 TLE6Q9H808 572 aa14.71□□□□□ -0.05
LDB3-204ENST00000372066 PCDH9Q9HC56 1237 aa14.71□□□□□ -0.05
LDB3-204ENST00000372066 AAASQ9NRG9 546 aa14.71□□□□□ -0.05
LDB3-204ENST00000372066 RGS18Q9NS28 235 aa14.71□□□□□ -0.05
LDB3-204ENST00000372066 CLEC1BQ9P126 229 aa14.71□□□□□ -0.05
LDB3-204ENST00000372066 HMGXB4Q9UGU5 601 aa14.71□□□□□ -0.05
LDB3-204ENST00000372066 SMAPO00193 183 aa14.7□□□□□ -0.06
LDB3-204ENST00000372066 EBAG9O00559 213 aa14.7□□□□□ -0.06
LDB3-204ENST00000372066 DPYSL4O14531 572 aa14.7□□□□□ -0.06
LDB3-204ENST00000372066 NDUFAB1O14561 156 aa14.7□□□□□ -0.06
LDB3-204ENST00000372066 TTC4O95801 387 aa14.7□□□□□ -0.06
LDB3-204ENST00000372066 SHBGP04278 402 aa14.7□□□□□ -0.06
LDB3-204ENST00000372066 ABHD2P08910 425 aa14.7□□□□□ -0.06
LDB3-204ENST00000372066 HOXA11P31270 313 aaPredicted RBP14.7□□□□□ -0.06
LDB3-204ENST00000372066 PNPLA4P41247 253 aa14.7□□□□□ -0.06
LDB3-204ENST00000372066 ZNF143P52747 638 aaPredicted RBP14.7□□□□□ -0.06
LDB3-204ENST00000372066 GUCY1A3Q02108 690 aa14.7□□□□□ -0.06
LDB3-204ENST00000372066 OASLQ15646 514 aaKnown RBP14.7□□□□□ -0.06
LDB3-204ENST00000372066 TNFAIP8L3Q5GJ75 292 aa14.7□□□□□ -0.06
LDB3-204ENST00000372066 FAM43BQ6ZT52 329 aaPredicted RBP14.7□□□□□ -0.06
LDB3-204ENST00000372066 SLC24A5Q71RS6 500 aa14.7□□□□□ -0.06
LDB3-204ENST00000372066 PCGF5Q86SE9 256 aa14.7□□□□□ -0.06
LDB3-204ENST00000372066 VSIG1Q86XK7 387 aa14.7□□□□□ -0.06
LDB3-204ENST00000372066 ZDHHC17Q8IUH5 632 aa14.7□□□□□ -0.06
LDB3-204ENST00000372066 ZCCHC9Q8N567 271 aaKnown RBP14.7□□□□□ -0.06
LDB3-204ENST00000372066 JOSD2Q8TAC2 188 aa14.7□□□□□ -0.06
LDB3-204ENST00000372066 STK32AQ8WU08 396 aa14.7□□□□□ -0.06
LDB3-204ENST00000372066 TMEM40Q8WWA1 233 aa14.7□□□□□ -0.06
LDB3-204ENST00000372066 TTC25Q96NG3 672 aa14.7□□□□□ -0.06
LDB3-204ENST00000372066 CNPY3Q9BT09 278 aa14.7□□□□□ -0.06
LDB3-204ENST00000372066 CYLDQ9NQC7 956 aa14.7□□□□□ -0.06
LDB3-204ENST00000372066 ZNF148Q9UQR1 794 aa14.7□□□□□ -0.06
LDB3-204ENST00000372066 C3orf70A6NLC5 250 aaPredicted RBP14.69□□□□□ -0.06
LDB3-204ENST00000372066 PER2O15055 1255 aa14.69□□□□□ -0.06
LDB3-204ENST00000372066 KRT10P13645 584 aa14.69□□□□□ -0.06
LDB3-204ENST00000372066 TCF4P15884 667 aa14.69□□□□□ -0.06
LDB3-204ENST00000372066 GPD1P21695 349 aa14.69□□□□□ -0.06
LDB3-204ENST00000372066 SCNN1AP37088 669 aa14.69□□□□□ -0.06
LDB3-204ENST00000372066 CRYBB1P53674 252 aaPredicted RBP14.69□□□□□ -0.06
LDB3-204ENST00000372066 MORF4L2Q15014 288 aa14.69□□□□□ -0.06
LDB3-204ENST00000372066 LLGL1Q15334 1064 aa14.69□□□□□ -0.06
LDB3-204ENST00000372066 ATP13A4Q4VNC1 1196 aa14.69□□□□□ -0.06
LDB3-204ENST00000372066 FAM102AQ5T9C2 384 aaPredicted RBP14.69□□□□□ -0.06
LDB3-204ENST00000372066 KAZNQ674X7 775 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms