RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 RBM15Q96T37 977 aaKnown RBP eCLIP11.95□□□□□ -0.5
TSPAN1-201ENST00000372003 ZBED2Q9BTP6 218 aa11.95□□□□□ -0.5
TSPAN1-201ENST00000372003 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.95□□□□□ -0.5
TSPAN1-201ENST00000372003 ZFP69BQ9UJL9 534 aa11.95□□□□□ -0.5
TSPAN1-201ENST00000372003 DRG1Q9Y295 367 aaKnown RBP11.95□□□□□ -0.5
TSPAN1-201ENST00000372003 LTBP2Q14767 1821 aa11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 DPPA5A6NC42 116 aa11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 MEIS3P2A8K0S8 358 aa11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 ALOX15BO15296 676 aa11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 TM9SF1O15321 606 aa11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 NVLO15381 856 aaKnown RBP11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 ATMINO43313 823 aaPredicted RBP11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 TYROBPO43914 113 aa11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 TGDSO95455 350 aa11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 IL1BP01584 269 aa11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 AKAP5P24588 427 aa11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 GCAP28676 217 aa11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 PAPOLAP51003 745 aaKnown RBP11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 FAM189BP81408 668 aa11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 MXRA7P84157 204 aa11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 DNAJC3Q13217 504 aa11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 MORF4L2Q15014 288 aa11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 SEZ6Q53EL9 994 aa11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 RASIP1Q5U651 963 aa11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 PRPF38BQ5VTL8 546 aaKnown RBP11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 HHATQ5VTY9 493 aa11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 FAM109BQ6ICB4 259 aaPredicted RBP11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 SLC39A4Q6P5W5 647 aa11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 MPZL3Q6UWV2 235 aa11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 C4orf50Q6ZRC1 276 aa11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 FAM47EQ6ZV65 393 aa11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 THNSL1Q8IYQ7 743 aa11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 PPM1KQ8N3J5 372 aa11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 GALNT15Q8N3T1 639 aa11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 RDH13Q8NBN7 331 aa11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 SMG8Q8ND04 991 aaKnown RBP11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 KCNV2Q8TDN2 545 aa11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 KCNN1Q92952 543 aa11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 TOP1MTQ969P6 601 aa11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 FAM136AQ96C01 138 aa11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 BTBD6Q96KE9 485 aa11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 HAPLN2Q9GZV7 340 aa11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 CDT1Q9H211 546 aa11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 RNF39Q9H2S5 420 aa11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 NXF3Q9H4D5 531 aaKnown RBP11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 KIAA1586Q9HCI6 787 aa11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 MRPL47Q9HD33 250 aaKnown RBP11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 PTPRHQ9HD43 1115 aa11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 CPSF2Q9P2I0 782 aaKnown RBP11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 TBK1Q9UHD2 729 aa11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 IPPQ9Y573 584 aa11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 TANC1Q9C0D5 1861 aa11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 SIP14410 1827 aa11.94□□□□□ -0.5
TSPAN1-201ENST00000372003 A8MXQ7 604 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 SMAPO00193 183 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 PIGRP01833 764 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 STAG3L1P0CL83 205 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 FGFR1P11362 822 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 GATMP50440 423 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 RAB27AP51159 221 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 RABGGTBP53611 331 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 KRT72Q14CN4 511 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 GSTA3Q16772 222 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 LIN9Q5TKA1 542 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 NLRP9Q7RTR0 991 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 PCGF5Q86SE9 256 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 NPAS4Q8IUM7 802 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 ARHGAP24Q8N264 748 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 FBXL13Q8NEE6 735 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 SPDYE1Q8NFV5 336 aaPredicted RBP11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 POMGNT1Q8WZA1 660 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 KAT5Q92993 513 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 C9orf72Q96LT7 481 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 FAM167BQ9BTA0 163 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 MSTO1Q9BUK6 570 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 OSBPL8Q9BZF1 889 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 YIPF3Q9GZM5 350 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 FAM192AQ9GZU8 254 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 VPS11Q9H270 941 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 PRO3102Q9H379 93 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 PCIF1Q9H4Z3 704 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 DENND2DQ9H6A0 471 aaPredicted RBP11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 PAPOLBQ9NRJ5 636 aaKnown RBP11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 TMEM161AQ9NX61 479 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 SNTG2Q9NY99 539 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 KLK14Q9P0G3 267 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 PSMC3IPQ9P2W1 217 aaPredicted RBP11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 SHOC2Q9UQ13 582 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 TET1Q8NFU7 2136 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 SIGLEC16A6NMB1 481 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 ZNF623O75123 536 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 CYP1A1P04798 512 aaPredicted RBP11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 RALAP11233 206 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 ATF7P17544 494 aaPredicted RBP11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 GM2AP17900 193 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 PROZP22891 400 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 EPHB2P29323 1055 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 PTPN7P35236 360 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 PEX19P40855 299 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms