RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 SGPL1O95470 568 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 GNA14O95837 355 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 MYBL2P10244 700 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 PF4V1P10720 104 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 DARSP14868 501 aaKnown RBP3.83□□□□□ -1.8
MCF2-202ENST00000370573 ARF4P18085 180 aaPredicted RBP3.83□□□□□ -1.8
MCF2-202ENST00000370573 SCP2P22307 547 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 BDNFP23560 247 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 TRHRP34981 398 aaPredicted RBP3.83□□□□□ -1.8
MCF2-202ENST00000370573 LIG4P49917 911 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 DLG4P78352 724 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 MRPS6P82932 125 aaKnown RBP3.83□□□□□ -1.8
MCF2-202ENST00000370573 MGAT3Q09327 533 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 PRPF4BQ13523 1007 aaKnown RBP3.83□□□□□ -1.8
MCF2-202ENST00000370573 SNX17Q15036 470 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 ZNF124Q15973 351 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 MAPK6Q16659 721 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 VWA3BQ502W6 1294 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 ATF7IP2Q5U623 682 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 DENND5AQ6IQ26 1287 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 CXorf57Q6NSI4 855 aaKnown RBP3.83□□□□□ -1.8
MCF2-202ENST00000370573 DPY19L2P1Q6NXN4 242 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 ARMCX5Q6P1M9 558 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 TAF2Q6P1X5 1199 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 ZPBP2Q6X784 338 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 SRGAP1Q7Z6B7 1085 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 THAP5Q7Z6K1 395 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 ADAT2Q7Z6V5 191 aaKnown RBP3.83□□□□□ -1.8
MCF2-202ENST00000370573 RPAINQ86UA6 219 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 ZSWIM9Q86XI8 627 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 VSTM4Q8IW00 320 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 FAM114A1Q8IWE2 563 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 FAM186BQ8IYM0 893 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 XXYLT1Q8NBI6 393 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 SPC24Q8NBT2 197 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 PIWIL2Q8TC59 973 aaKnown RBP3.83□□□□□ -1.8
MCF2-202ENST00000370573 DIS3LQ8TF46 1054 aaKnown RBP3.83□□□□□ -1.8
MCF2-202ENST00000370573 U2AF1L4Q8WU68 220 aaKnown RBP3.83□□□□□ -1.8
MCF2-202ENST00000370573 POMGNT1Q8WZA1 660 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 SLC35C1Q96A29 364 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 BICD1Q96G01 975 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 C1orf159Q96HA4 380 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 FUBP3Q96I24 572 aaKnown RBP eCLIP3.83□□□□□ -1.8
MCF2-202ENST00000370573 CPB2Q96IY4 423 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 COX4I2Q96KJ9 171 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 FAM84AQ96KN4 292 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 GLT1D1Q96MS3 346 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 CELF4Q9BZC1 486 aaKnown RBP3.83□□□□□ -1.8
MCF2-202ENST00000370573 GCOM2Q9BZD3 368 aaPredicted RBP3.83□□□□□ -1.8
MCF2-202ENST00000370573 PDZD7Q9H5P4 517 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 STARD7Q9NQZ5 370 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 PRMT7Q9NVM4 692 aaPredicted RBP3.83□□□□□ -1.8
MCF2-202ENST00000370573 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.83□□□□□ -1.8
MCF2-202ENST00000370573 ARMCX3Q9UH62 379 aaPredicted RBP3.83□□□□□ -1.8
MCF2-202ENST00000370573 DUSP13Q9UII6 198 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 GINS2Q9Y248 185 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 PCDHA9Q9Y5H5 950 aa3.83□□□□□ -1.8
MCF2-202ENST00000370573 KIAA0100Q14667 2235 aaKnown RBP3.82□□□□□ -1.8
MCF2-202ENST00000370573 A0A1B0GUA9 196 aa3.82□□□□□ -1.8
MCF2-202ENST00000370573 KBTBD13C9JR72 458 aa3.82□□□□□ -1.8
MCF2-202ENST00000370573 EXTL3O43909 919 aa3.82□□□□□ -1.8
MCF2-202ENST00000370573 B4GALT4O60513 344 aa3.82□□□□□ -1.8
MCF2-202ENST00000370573 TOM1L1O75674 476 aa3.82□□□□□ -1.8
MCF2-202ENST00000370573 TFRCP02786 760 aaKnown RBP3.82□□□□□ -1.8
MCF2-202ENST00000370573 EPB41P11171 864 aaKnown RBP3.82□□□□□ -1.8
MCF2-202ENST00000370573 ABCD1P33897 745 aa3.82□□□□□ -1.8
MCF2-202ENST00000370573 TNFSF9P41273 254 aa3.82□□□□□ -1.8
MCF2-202ENST00000370573 ACOT2P49753 483 aa3.82□□□□□ -1.8
MCF2-202ENST00000370573 KLK7P49862 253 aa3.82□□□□□ -1.8
MCF2-202ENST00000370573 CRYBB1P53674 252 aaPredicted RBP3.82□□□□□ -1.8
MCF2-202ENST00000370573 CDC42EP1Q00587 391 aa3.82□□□□□ -1.8
MCF2-202ENST00000370573 UBXN1Q04323 297 aa3.82□□□□□ -1.8
MCF2-202ENST00000370573 GOLGA8FQ08AF8 430 aa3.82□□□□□ -1.8
MCF2-202ENST00000370573 GOLGA8DPQ0D2H9 430 aa3.82□□□□□ -1.8
MCF2-202ENST00000370573 TBX2Q13207 712 aaPredicted RBP3.82□□□□□ -1.8
MCF2-202ENST00000370573 PKN2Q16513 984 aaKnown RBP3.82□□□□□ -1.8
MCF2-202ENST00000370573 SNRNP35Q16560 246 aaKnown RBP3.82□□□□□ -1.8
MCF2-202ENST00000370573 MAN2A1Q16706 1144 aa3.82□□□□□ -1.8
MCF2-202ENST00000370573 SLFN12LQ6IEE8 588 aa3.82□□□□□ -1.8
MCF2-202ENST00000370573 ZCCHC8Q6NZY4 707 aaKnown RBP3.82□□□□□ -1.8
MCF2-202ENST00000370573 TMC6Q7Z403 805 aa3.82□□□□□ -1.8
MCF2-202ENST00000370573 CMIPQ8IY22 773 aa3.82□□□□□ -1.8
MCF2-202ENST00000370573 CPA6Q8N4T0 437 aa3.82□□□□□ -1.8
MCF2-202ENST00000370573 RNF141Q8WVD5 230 aa3.82□□□□□ -1.8
MCF2-202ENST00000370573 PTPRN2Q92932 1015 aa3.82□□□□□ -1.8
MCF2-202ENST00000370573 DHRS1Q96LJ7 313 aa3.82□□□□□ -1.8
MCF2-202ENST00000370573 SCLT1Q96NL6 688 aa3.82□□□□□ -1.8
MCF2-202ENST00000370573 FAM213AQ9BRX8 229 aa3.82□□□□□ -1.8
MCF2-202ENST00000370573 MSTO1Q9BUK6 570 aa3.82□□□□□ -1.8
MCF2-202ENST00000370573 SENP6Q9GZR1 1112 aaPredicted RBP3.82□□□□□ -1.8
MCF2-202ENST00000370573 CDT1Q9H211 546 aa3.82□□□□□ -1.8
MCF2-202ENST00000370573 NDST4Q9H3R1 872 aa3.82□□□□□ -1.8
MCF2-202ENST00000370573 KCNK12Q9HB15 430 aa3.82□□□□□ -1.8
MCF2-202ENST00000370573 ANKFY1Q9P2R3 1169 aa3.82□□□□□ -1.8
MCF2-202ENST00000370573 AGO2Q9UKV8 859 aaKnown RBP3.82□□□□□ -1.8
MCF2-202ENST00000370573 TNFSF13BQ9Y275 285 aa3.82□□□□□ -1.8
MCF2-202ENST00000370573 EMC9Q9Y3B6 208 aa3.82□□□□□ -1.8
MCF2-202ENST00000370573 NOC2LQ9Y3T9 749 aaKnown RBP3.82□□□□□ -1.8
MCF2-202ENST00000370573 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.82□□□□□ -1.8
MCF2-202ENST00000370573 TRPV2Q9Y5S1 764 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms