RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 CACNG3O60359 315 aa16.32■□□□□ 0.2
SSR4-204ENST00000370087 ZNF217O75362 1048 aa16.32■□□□□ 0.2
SSR4-204ENST00000370087 BMP15O95972 392 aa16.32■□□□□ 0.2
SSR4-204ENST00000370087 ZDHHC11BP0C7U3 371 aa16.32■□□□□ 0.2
SSR4-204ENST00000370087 SLC5A3P53794 718 aa16.32■□□□□ 0.2
SSR4-204ENST00000370087 TP53BP1Q12888 1972 aaPredicted RBP16.32■□□□□ 0.2
SSR4-204ENST00000370087 SNX30Q5VWJ9 437 aa16.32■□□□□ 0.2
SSR4-204ENST00000370087 RRAGBQ5VZM2 374 aa16.32■□□□□ 0.2
SSR4-204ENST00000370087 KIAA1324Q6UXG2 1013 aaKnown RBP16.32■□□□□ 0.2
SSR4-204ENST00000370087 SV2BQ7L1I2 683 aa16.32■□□□□ 0.2
SSR4-204ENST00000370087 GLRX5Q86SX6 157 aa16.32■□□□□ 0.2
SSR4-204ENST00000370087 FAM35AQ86V20 835 aa16.32■□□□□ 0.2
SSR4-204ENST00000370087 ZCCHC9Q8N567 271 aaKnown RBP16.32■□□□□ 0.2
SSR4-204ENST00000370087 PDZD8Q8NEN9 1154 aa16.32■□□□□ 0.2
SSR4-204ENST00000370087 OVCA2Q8WZ82 227 aa16.32■□□□□ 0.2
SSR4-204ENST00000370087 ELMO3Q96BJ8 720 aa16.32■□□□□ 0.2
SSR4-204ENST00000370087 DUSP9Q99956 384 aaKnown RBP16.32■□□□□ 0.2
SSR4-204ENST00000370087 PANK4Q9NVE7 773 aa16.32■□□□□ 0.2
SSR4-204ENST00000370087 HSPBP1Q9NZL4 362 aa16.32■□□□□ 0.2
SSR4-204ENST00000370087 R3HCC1Q9Y3T6 440 aaKnown RBP16.32■□□□□ 0.2
SSR4-204ENST00000370087 ZNF233A6NK53 670 aa16.31■□□□□ 0.2
SSR4-204ENST00000370087 NDUFS2O75306 463 aa16.31■□□□□ 0.2
SSR4-204ENST00000370087 RTN3O95197 1032 aaPredicted RBP16.31■□□□□ 0.2
SSR4-204ENST00000370087 TYRP14679 529 aa16.31■□□□□ 0.2
SSR4-204ENST00000370087 ALCAMQ13740 583 aa16.31■□□□□ 0.2
SSR4-204ENST00000370087 BAHD1Q8TBE0 780 aaPredicted RBP16.31■□□□□ 0.2
SSR4-204ENST00000370087 FAM124BQ9H5Z6 455 aaPredicted RBP16.31■□□□□ 0.2
SSR4-204ENST00000370087 SMYD3Q9H7B4 428 aa16.31■□□□□ 0.2
SSR4-204ENST00000370087 IL37Q9NZH6 218 aa16.31■□□□□ 0.2
SSR4-204ENST00000370087 FNDC3AQ9Y2H6 1198 aaKnown RBP16.31■□□□□ 0.2
SSR4-204ENST00000370087 ACACAQ13085 2346 aa16.31■□□□□ 0.2
SSR4-204ENST00000370087 CKAP5Q14008 2032 aa16.31■□□□□ 0.2
SSR4-204ENST00000370087 A8MXQ7 604 aa16.3■□□□□ 0.2
SSR4-204ENST00000370087 KCNJ18B7U540 433 aa16.3■□□□□ 0.2
SSR4-204ENST00000370087 TBX18O95935 607 aa16.3■□□□□ 0.2
SSR4-204ENST00000370087 DLATP10515 647 aaKnown RBP16.3■□□□□ 0.2
SSR4-204ENST00000370087 TUBP50607 506 aa16.3■□□□□ 0.2
SSR4-204ENST00000370087 CDH8P55286 799 aa16.3■□□□□ 0.2
SSR4-204ENST00000370087 WDR72Q3MJ13 1102 aa16.3■□□□□ 0.2
SSR4-204ENST00000370087 TPGS1Q6ZTW0 290 aa16.3■□□□□ 0.2
SSR4-204ENST00000370087 RDH13Q8NBN7 331 aa16.3■□□□□ 0.2
SSR4-204ENST00000370087 ZMIZ2Q8NF64 920 aa16.3■□□□□ 0.2
SSR4-204ENST00000370087 ZNF516Q92618 1163 aa16.3■□□□□ 0.2
SSR4-204ENST00000370087 BHMTQ93088 406 aa16.3■□□□□ 0.2
SSR4-204ENST00000370087 CGRRF1Q99675 332 aa16.3■□□□□ 0.2
SSR4-204ENST00000370087 BBS2Q9BXC9 721 aa16.3■□□□□ 0.2
SSR4-204ENST00000370087 XYLT2Q9H1B5 865 aa16.3■□□□□ 0.2
SSR4-204ENST00000370087 NXF1Q9UBU9 619 aaKnown RBP16.3■□□□□ 0.2
SSR4-204ENST00000370087 CCDC39Q9UFE4 941 aa16.3■□□□□ 0.2
SSR4-204ENST00000370087 SUSD2Q9UGT4 822 aa16.3■□□□□ 0.2
SSR4-204ENST00000370087 APOBEC2Q9Y235 224 aaKnown RBP16.3■□□□□ 0.2
SSR4-204ENST00000370087 SLCO1B1Q9Y6L6 691 aa16.3■□□□□ 0.2
SSR4-204ENST00000370087 FAM92AA1XBS5 289 aa16.29■□□□□ 0.2
SSR4-204ENST00000370087 BEST1O76090 585 aa16.29■□□□□ 0.2
SSR4-204ENST00000370087 DKK1O94907 266 aa16.29■□□□□ 0.2
SSR4-204ENST00000370087 CISD3P0C7P0 127 aa16.29■□□□□ 0.2
SSR4-204ENST00000370087 ATXN1LP0C7T5 689 aaKnown RBP16.29■□□□□ 0.2
SSR4-204ENST00000370087 CD6P30203 668 aa16.29■□□□□ 0.2
SSR4-204ENST00000370087 MYL6P60660 151 aa16.29■□□□□ 0.2
SSR4-204ENST00000370087 TNNC1P63316 161 aa16.29■□□□□ 0.2
SSR4-204ENST00000370087 SURF1Q15526 300 aa16.29■□□□□ 0.2
SSR4-204ENST00000370087 FUT11Q495W5 492 aa16.29■□□□□ 0.2
SSR4-204ENST00000370087 PREPLQ4J6C6 727 aaPredicted RBP16.29■□□□□ 0.2
SSR4-204ENST00000370087 SYCP2LQ5T4T6 812 aa16.29■□□□□ 0.2
SSR4-204ENST00000370087 BRAPQ7Z569 592 aa16.29■□□□□ 0.2
SSR4-204ENST00000370087 SETD7Q8WTS6 366 aaKnown RBP16.29■□□□□ 0.2
SSR4-204ENST00000370087 SCFD1Q8WVM8 642 aa16.29■□□□□ 0.2
SSR4-204ENST00000370087 DNASE2BQ8WZ79 361 aa16.29■□□□□ 0.2
SSR4-204ENST00000370087 CCDC127Q96BQ5 260 aa16.29■□□□□ 0.2
SSR4-204ENST00000370087 TOE1Q96GM8 510 aaKnown RBP16.29■□□□□ 0.2
SSR4-204ENST00000370087 GPR174Q9BXC1 333 aa16.29■□□□□ 0.2
SSR4-204ENST00000370087 KLF16Q9BXK1 252 aaPredicted RBP16.29■□□□□ 0.2
SSR4-204ENST00000370087 PANK2Q9BZ23 570 aa16.29■□□□□ 0.2
SSR4-204ENST00000370087 SDCBP2Q9H190 292 aa16.29■□□□□ 0.2
SSR4-204ENST00000370087 SCUBE2Q9NQ36 999 aa16.29■□□□□ 0.2
SSR4-204ENST00000370087 KRT82Q9NSB4 513 aa16.29■□□□□ 0.2
SSR4-204ENST00000370087 OSER1Q9NX31 292 aa16.29■□□□□ 0.2
SSR4-204ENST00000370087 MARK1Q9P0L2 795 aa16.29■□□□□ 0.2
SSR4-204ENST00000370087 USP36Q9P275 1121 aaKnown RBP16.29■□□□□ 0.2
SSR4-204ENST00000370087 MUC22E2RYF6 1773 aaPredicted RBP16.28■□□□□ 0.2
SSR4-204ENST00000370087 A0A1B0GTW7 788 aa16.28■□□□□ 0.2
SSR4-204ENST00000370087 MEI4A8MW99 385 aa16.28■□□□□ 0.2
SSR4-204ENST00000370087 KIAA0391O15091 583 aaKnown RBP16.28■□□□□ 0.2
SSR4-204ENST00000370087 MDM4O15151 490 aa16.28■□□□□ 0.2
SSR4-204ENST00000370087 TGFB1I1O43294 461 aa16.28■□□□□ 0.2
SSR4-204ENST00000370087 TLR5O60602 858 aa16.28■□□□□ 0.2
SSR4-204ENST00000370087 CILPO75339 1184 aa16.28■□□□□ 0.2
SSR4-204ENST00000370087 NCAM1P13591 858 aa16.28■□□□□ 0.2
SSR4-204ENST00000370087 GNSP15586 552 aa16.28■□□□□ 0.2
SSR4-204ENST00000370087 CYP24A1Q07973 514 aa16.28■□□□□ 0.2
SSR4-204ENST00000370087 ORC1Q13415 861 aa16.28■□□□□ 0.2
SSR4-204ENST00000370087 SNRNP35Q16560 246 aaKnown RBP16.28■□□□□ 0.2
SSR4-204ENST00000370087 WDR45BQ5MNZ6 344 aa16.28■□□□□ 0.2
SSR4-204ENST00000370087 LARP1BQ659C4 914 aaKnown RBP16.28■□□□□ 0.2
SSR4-204ENST00000370087 SDE2Q6IQ49 451 aa16.28■□□□□ 0.2
SSR4-204ENST00000370087 FAM173BQ6P4H8 233 aa16.28■□□□□ 0.2
SSR4-204ENST00000370087 HTR3DQ70Z44 454 aa16.28■□□□□ 0.2
SSR4-204ENST00000370087 TMPRSS7Q7RTY8 843 aa16.28■□□□□ 0.2
SSR4-204ENST00000370087 GPRIN1Q7Z2K8 1008 aa16.28■□□□□ 0.2
SSR4-204ENST00000370087 FUKQ8N0W3 1084 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms