RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 MAGEB2O15479 319 aa12.83□□□□□ -0.36
HCFC1-202ENST00000369984 CPSF4O95639 269 aaKnown RBP12.83□□□□□ -0.36
HCFC1-202ENST00000369984 DDI2Q5TDH0 399 aa12.83□□□□□ -0.36
HCFC1-202ENST00000369984 CEP44Q9C0F1 390 aa12.83□□□□□ -0.36
HCFC1-202ENST00000369984 KPNA4O00629 521 aaPredicted RBP12.83□□□□□ -0.36
HCFC1-202ENST00000369984 ITGB3P05106 788 aa12.83□□□□□ -0.36
HCFC1-202ENST00000369984 EPHB2P29323 1055 aa12.83□□□□□ -0.36
HCFC1-202ENST00000369984 GSTA3Q16772 222 aa12.83□□□□□ -0.36
HCFC1-202ENST00000369984 FAXCQ5TGI0 409 aa12.83□□□□□ -0.36
HCFC1-202ENST00000369984 FAM9CQ8IZT9 166 aa12.83□□□□□ -0.36
HCFC1-202ENST00000369984 FBXO36Q8NEA4 188 aa12.83□□□□□ -0.36
HCFC1-202ENST00000369984 TPD52L3Q96J77 140 aa12.83□□□□□ -0.36
HCFC1-202ENST00000369984 MIEF1Q9NQG6 463 aa12.83□□□□□ -0.36
HCFC1-202ENST00000369984 STK39Q9UEW8 545 aa12.83□□□□□ -0.36
HCFC1-202ENST00000369984 FAM20BO75063 409 aa12.82□□□□□ -0.36
HCFC1-202ENST00000369984 IGKV5-2P06315 115 aa12.82□□□□□ -0.36
HCFC1-202ENST00000369984 MAPKAPK2P49137 400 aa12.82□□□□□ -0.36
HCFC1-202ENST00000369984 STK4Q13043 487 aa12.82□□□□□ -0.36
HCFC1-202ENST00000369984 TCHHL1Q5QJ38 904 aaPredicted RBP12.82□□□□□ -0.36
HCFC1-202ENST00000369984 C11orf63Q6NUN7 778 aa12.82□□□□□ -0.36
HCFC1-202ENST00000369984 COPG2Q9UBF2 871 aa12.82□□□□□ -0.36
HCFC1-202ENST00000369984 GRK3P35626 688 aa12.82□□□□□ -0.36
HCFC1-202ENST00000369984 RFC5P40937 340 aa12.82□□□□□ -0.36
HCFC1-202ENST00000369984 MED8Q96G25 268 aa12.82□□□□□ -0.36
HCFC1-202ENST00000369984 PACSIN1Q9BY11 444 aa12.82□□□□□ -0.36
HCFC1-202ENST00000369984 ABI2Q9NYB9 513 aaPredicted RBP12.82□□□□□ -0.36
HCFC1-202ENST00000369984 GPRC5DQ9NZD1 345 aa12.82□□□□□ -0.36
HCFC1-202ENST00000369984 IQGAP3Q86VI3 1631 aa12.82□□□□□ -0.36
HCFC1-202ENST00000369984 JAK1P23458 1154 aa12.82□□□□□ -0.36
HCFC1-202ENST00000369984 EPC2Q52LR7 807 aa12.82□□□□□ -0.36
HCFC1-202ENST00000369984 KCNT1Q5JUK3 1230 aa12.82□□□□□ -0.36
HCFC1-202ENST00000369984 GJB7Q6PEY0 223 aa12.82□□□□□ -0.36
HCFC1-202ENST00000369984 UTP15Q8TED0 518 aaKnown RBP12.82□□□□□ -0.36
HCFC1-202ENST00000369984 PHACTR1Q9C0D0 580 aa12.82□□□□□ -0.36
HCFC1-202ENST00000369984 ATP9AO75110 1047 aa12.82□□□□□ -0.36
HCFC1-202ENST00000369984 RPS6KA5O75582 802 aa12.82□□□□□ -0.36
HCFC1-202ENST00000369984 ODC1P11926 461 aa12.82□□□□□ -0.36
HCFC1-202ENST00000369984 CNTFP26441 200 aa12.82□□□□□ -0.36
HCFC1-202ENST00000369984 IZUMO1Q8IYV9 350 aa12.82□□□□□ -0.36
HCFC1-202ENST00000369984 HNRNPLLQ8WVV9 542 aaKnown RBP12.82□□□□□ -0.36
HCFC1-202ENST00000369984 KAT2BQ92831 832 aa12.82□□□□□ -0.36
HCFC1-202ENST00000369984 BDH2Q9BUT1 245 aa12.82□□□□□ -0.36
HCFC1-202ENST00000369984 M0QYT0 321 aa12.82□□□□□ -0.36
HCFC1-202ENST00000369984 C2CD2LO14523 706 aa12.82□□□□□ -0.36
HCFC1-202ENST00000369984 PSMB9P28065 219 aa12.82□□□□□ -0.36
HCFC1-202ENST00000369984 STIP1P31948 543 aaKnown RBP12.82□□□□□ -0.36
HCFC1-202ENST00000369984 ENKURQ8TC29 256 aa12.82□□□□□ -0.36
HCFC1-202ENST00000369984 FAM129BQ96TA1 746 aa12.82□□□□□ -0.36
HCFC1-202ENST00000369984 NIF3L1Q9GZT8 377 aa12.82□□□□□ -0.36
HCFC1-202ENST00000369984 PNPLA7Q6ZV29 1317 aa12.82□□□□□ -0.36
HCFC1-202ENST00000369984 CITO14578 2027 aa12.82□□□□□ -0.36
HCFC1-202ENST00000369984 KLRC1P26715 233 aa12.82□□□□□ -0.36
HCFC1-202ENST00000369984 DGKDQ16760 1214 aa12.82□□□□□ -0.36
HCFC1-202ENST00000369984 KLHDC7AQ5VTJ3 777 aa12.82□□□□□ -0.36
HCFC1-202ENST00000369984 ATP6V0D2Q8N8Y2 350 aa12.82□□□□□ -0.36
HCFC1-202ENST00000369984 IFNA14P01570 189 aa12.82□□□□□ -0.36
HCFC1-202ENST00000369984 PLEKP08567 350 aaPredicted RBP12.82□□□□□ -0.36
HCFC1-202ENST00000369984 PBLDP30039 288 aaPredicted RBP12.82□□□□□ -0.36
HCFC1-202ENST00000369984 VAC14Q08AM6 782 aa12.82□□□□□ -0.36
HCFC1-202ENST00000369984 TIGD7Q6NT04 549 aaPredicted RBP12.82□□□□□ -0.36
HCFC1-202ENST00000369984 GPRASP2Q96D09 838 aa12.82□□□□□ -0.36
HCFC1-202ENST00000369984 KBTBD13C9JR72 458 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 PDE9AO76083 593 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 ASS1P00966 412 aaKnown RBP12.81□□□□□ -0.36
HCFC1-202ENST00000369984 ZNF57Q68EA5 555 aaPredicted RBP12.81□□□□□ -0.36
HCFC1-202ENST00000369984 MACC1Q6ZN28 852 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 COMMD2Q86X83 199 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 CELF1Q92879 486 aaKnown RBP12.81□□□□□ -0.36
HCFC1-202ENST00000369984 SERAC1Q96JX3 654 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 PLA2G6O60733 806 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 SNUPNO95149 360 aaKnown RBP12.81□□□□□ -0.36
HCFC1-202ENST00000369984 SLC2A3P11169 496 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 VCLP18206 1134 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 LGALS3BPQ08380 585 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 TMEM26Q6ZUK4 368 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 CCDC33Q8N5R6 958 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 METP08581 1390 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.81□□□□□ -0.36
HCFC1-202ENST00000369984 BAIAP3O94812 1187 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 MAP3K6O95382 1288 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 S100A6P06703 90 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 FAM58BPP0C7Q3 252 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 ZNF177Q13360 481 aaPredicted RBP12.81□□□□□ -0.36
HCFC1-202ENST00000369984 CUL2Q13617 745 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 SLC13A5Q86YT5 568 aaPredicted RBP12.81□□□□□ -0.36
HCFC1-202ENST00000369984 CACTIN-AS1Q8N1I8 211 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 MOV10L1Q9BXT6 1211 aaKnown RBP12.81□□□□□ -0.36
HCFC1-202ENST00000369984 KLHL1Q9NR64 748 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 DPP3Q9NY33 737 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 USP18Q9UMW8 372 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 CDHR2Q9BYE9 1310 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 FAM220BPB1ANY3 271 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 MUTP22033 750 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 YWHAQP27348 245 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 DSG3P32926 999 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 EXOSC10Q01780 885 aaKnown RBP12.81□□□□□ -0.36
HCFC1-202ENST00000369984 FAM98BQ52LJ0 330 aaKnown RBP12.81□□□□□ -0.36
HCFC1-202ENST00000369984 MYO1HQ8N1T3 1032 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 MTMR4Q9NYA4 1195 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 DSEQ9UL01 958 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms