RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 K7ESF4 209 aa21.6■■□□□ 1.05
SMNDC1-201ENST00000369592 EGFP01133 1207 aa21.6■■□□□ 1.05
SMNDC1-201ENST00000369592 CHRM1P11229 460 aaPredicted RBP21.6■■□□□ 1.05
SMNDC1-201ENST00000369592 CD19P15391 556 aa21.6■■□□□ 1.05
SMNDC1-201ENST00000369592 DRD1P21728 446 aa21.6■■□□□ 1.05
SMNDC1-201ENST00000369592 ATP5C1P36542 298 aaKnown RBP21.6■■□□□ 1.05
SMNDC1-201ENST00000369592 SATB1Q01826 763 aa21.6■■□□□ 1.05
SMNDC1-201ENST00000369592 GRSF1Q12849 480 aaKnown RBP eCLIP21.6■■□□□ 1.05
SMNDC1-201ENST00000369592 NR1H3Q13133 447 aa21.6■■□□□ 1.05
SMNDC1-201ENST00000369592 MIIPQ5JXC2 388 aa21.6■■□□□ 1.05
SMNDC1-201ENST00000369592 PKN3Q6P5Z2 889 aa21.6■■□□□ 1.05
SMNDC1-201ENST00000369592 TSSK4Q6SA08 328 aa21.6■■□□□ 1.05
SMNDC1-201ENST00000369592 RBBP8NLQ8NC74 664 aaPredicted RBP21.6■■□□□ 1.05
SMNDC1-201ENST00000369592 TTC16Q8NEE8 873 aa21.6■■□□□ 1.05
SMNDC1-201ENST00000369592 CD101Q93033 1021 aa21.6■■□□□ 1.05
SMNDC1-201ENST00000369592 FAM126AQ9BYI3 521 aaPredicted RBP21.6■■□□□ 1.05
SMNDC1-201ENST00000369592 MYO18AQ92614 2054 aaKnown RBP21.59■■□□□ 1.05
SMNDC1-201ENST00000369592 CHURC1-FNTBB4DL54 471 aa21.59■■□□□ 1.05
SMNDC1-201ENST00000369592 SCAMP3O14828 347 aaKnown RBP21.59■■□□□ 1.05
SMNDC1-201ENST00000369592 CALCAP01258 141 aa21.59■■□□□ 1.05
SMNDC1-201ENST00000369592 SETSIPP0DME0 302 aa21.59■■□□□ 1.05
SMNDC1-201ENST00000369592 SLC9A1P19634 815 aa21.59■■□□□ 1.05
SMNDC1-201ENST00000369592 HOXA6P31267 233 aa21.59■■□□□ 1.05
SMNDC1-201ENST00000369592 CXCL12P48061 93 aa21.59■■□□□ 1.05
SMNDC1-201ENST00000369592 RPL34P49207 117 aaKnown RBP21.59■■□□□ 1.05
SMNDC1-201ENST00000369592 TKTL1P51854 596 aa21.59■■□□□ 1.05
SMNDC1-201ENST00000369592 STILQ15468 1287 aa21.59■■□□□ 1.05
SMNDC1-201ENST00000369592 BBS7Q8IWZ6 715 aa21.59■■□□□ 1.05
SMNDC1-201ENST00000369592 UBA3Q8TBC4 463 aa21.59■■□□□ 1.05
SMNDC1-201ENST00000369592 CRACR2AQ9BSW2 395 aa21.59■■□□□ 1.05
SMNDC1-201ENST00000369592 SIX2Q9NPC8 291 aa21.59■■□□□ 1.05
SMNDC1-201ENST00000369592 ZSCAN32Q9NX65 697 aa21.59■■□□□ 1.05
SMNDC1-201ENST00000369592 HESX1Q9UBX0 185 aa21.59■■□□□ 1.05
SMNDC1-201ENST00000369592 DACH1Q9UI36 760 aa21.59■■□□□ 1.05
SMNDC1-201ENST00000369592 NAGPAQ9UK23 515 aa21.59■■□□□ 1.05
SMNDC1-201ENST00000369592 PCDHGA2Q9Y5H1 932 aa21.59■■□□□ 1.05
SMNDC1-201ENST00000369592 A0A0A0MRY4 1105 aa21.58■■□□□ 1.05
SMNDC1-201ENST00000369592 MDM4O15151 490 aa21.58■■□□□ 1.05
SMNDC1-201ENST00000369592 ZBED1O96006 694 aa21.58■■□□□ 1.05
SMNDC1-201ENST00000369592 PON1P27169 355 aa21.58■■□□□ 1.05
SMNDC1-201ENST00000369592 SLC8A3P57103 927 aa21.58■■□□□ 1.05
SMNDC1-201ENST00000369592 MAN2A1Q16706 1144 aa21.58■■□□□ 1.05
SMNDC1-201ENST00000369592 Q6ZNB5 142 aa21.58■■□□□ 1.05
SMNDC1-201ENST00000369592 ENOSF1Q7L5Y1 443 aa21.58■■□□□ 1.05
SMNDC1-201ENST00000369592 PHTF2Q8N3S3 785 aa21.58■■□□□ 1.05
SMNDC1-201ENST00000369592 ULBP1Q9BZM6 244 aa21.58■■□□□ 1.05
SMNDC1-201ENST00000369592 UBE2TQ9NPD8 197 aaPredicted RBP21.58■■□□□ 1.05
SMNDC1-201ENST00000369592 DNMT3LQ9UJW3 386 aa21.58■■□□□ 1.05
SMNDC1-201ENST00000369592 NUDT5Q9UKK9 219 aa21.58■■□□□ 1.05
SMNDC1-201ENST00000369592 MED19A0JLT2 244 aaPredicted RBP21.57■■□□□ 1.04
SMNDC1-201ENST00000369592 BECN2A8MW95 431 aa21.57■■□□□ 1.04
SMNDC1-201ENST00000369592 BRD2P25440 801 aaKnown RBP21.57■■□□□ 1.04
SMNDC1-201ENST00000369592 EIF2DP41214 584 aaKnown RBP21.57■■□□□ 1.04
SMNDC1-201ENST00000369592 APBA1Q02410 837 aa21.57■■□□□ 1.04
SMNDC1-201ENST00000369592 MESP2Q0VG99 397 aa21.57■■□□□ 1.04
SMNDC1-201ENST00000369592 MEA1Q16626 185 aa21.57■■□□□ 1.04
SMNDC1-201ENST00000369592 FBXO43Q4G163 708 aa21.57■■□□□ 1.04
SMNDC1-201ENST00000369592 LY6G5CQ5SRR4 150 aa21.57■■□□□ 1.04
SMNDC1-201ENST00000369592 PMF1Q6P1K2 205 aa21.57■■□□□ 1.04
SMNDC1-201ENST00000369592 GJB7Q6PEY0 223 aa21.57■■□□□ 1.04
SMNDC1-201ENST00000369592 ZC3H14Q6PJT7 736 aaKnown RBP21.57■■□□□ 1.04
SMNDC1-201ENST00000369592 GBP6Q6ZN66 633 aa21.57■■□□□ 1.04
SMNDC1-201ENST00000369592 ETFBKMTQ8IXQ9 262 aa21.57■■□□□ 1.04
SMNDC1-201ENST00000369592 ARHGAP18Q8N392 663 aa21.57■■□□□ 1.04
SMNDC1-201ENST00000369592 SUMF1Q8NBK3 374 aa21.57■■□□□ 1.04
SMNDC1-201ENST00000369592 ENOX1Q8TC92 643 aaKnown RBP21.57■■□□□ 1.04
SMNDC1-201ENST00000369592 NDRG1Q92597 394 aaKnown RBP21.57■■□□□ 1.04
SMNDC1-201ENST00000369592 CDK5RAP1Q96SZ6 601 aaKnown RBP21.57■■□□□ 1.04
SMNDC1-201ENST00000369592 SH3BP1Q9Y3L3 701 aa21.57■■□□□ 1.04
SMNDC1-201ENST00000369592 K7EQS6 105 aa21.56■■□□□ 1.04
SMNDC1-201ENST00000369592 HOXC11O43248 304 aaPredicted RBP21.56■■□□□ 1.04
SMNDC1-201ENST00000369592 RALAP11233 206 aa21.56■■□□□ 1.04
SMNDC1-201ENST00000369592 HOXC13P31276 330 aa21.56■■□□□ 1.04
SMNDC1-201ENST00000369592 MTIF2P46199 727 aaKnown RBP21.56■■□□□ 1.04
SMNDC1-201ENST00000369592 EXOC3L4Q17RC7 722 aa21.56■■□□□ 1.04
SMNDC1-201ENST00000369592 C10orf120Q5SQS8 335 aa21.56■■□□□ 1.04
SMNDC1-201ENST00000369592 C12orf40Q86WS4 652 aa21.56■■□□□ 1.04
SMNDC1-201ENST00000369592 FAM114A1Q8IWE2 563 aa21.56■■□□□ 1.04
SMNDC1-201ENST00000369592 SHC3Q92529 594 aa21.56■■□□□ 1.04
SMNDC1-201ENST00000369592 EXOC4Q96A65 974 aa21.56■■□□□ 1.04
SMNDC1-201ENST00000369592 FAM81BQ96LP2 452 aa21.56■■□□□ 1.04
SMNDC1-201ENST00000369592 CNGB3Q9NQW8 809 aa21.56■■□□□ 1.04
SMNDC1-201ENST00000369592 SAMSN1Q9NSI8 373 aaKnown RBP21.56■■□□□ 1.04
SMNDC1-201ENST00000369592 APEX2Q9UBZ4 518 aa21.56■■□□□ 1.04
SMNDC1-201ENST00000369592 RNF40O75150 1001 aa21.55■■□□□ 1.04
SMNDC1-201ENST00000369592 STC2O76061 302 aa21.55■■□□□ 1.04
SMNDC1-201ENST00000369592 ADH1CP00326 375 aa21.55■■□□□ 1.04
SMNDC1-201ENST00000369592 KLKB1P03952 638 aa21.55■■□□□ 1.04
SMNDC1-201ENST00000369592 GPD2P43304 727 aa21.55■■□□□ 1.04
SMNDC1-201ENST00000369592 SLC6A11P48066 632 aa21.55■■□□□ 1.04
SMNDC1-201ENST00000369592 YWHAGP61981 247 aaKnown RBP eCLIP21.55■■□□□ 1.04
SMNDC1-201ENST00000369592 ADIGQ0VDE8 80 aa21.55■■□□□ 1.04
SMNDC1-201ENST00000369592 TADA2BQ86TJ2 420 aa21.55■■□□□ 1.04
SMNDC1-201ENST00000369592 TMEM25Q86YD3 366 aa21.55■■□□□ 1.04
SMNDC1-201ENST00000369592 SECISBP2LQ93073 1101 aaKnown RBP21.55■■□□□ 1.04
SMNDC1-201ENST00000369592 HSFY1Q96LI6 401 aa21.55■■□□□ 1.04
SMNDC1-201ENST00000369592 TUBGCP2Q9BSJ2 902 aa21.55■■□□□ 1.04
SMNDC1-201ENST00000369592 NACA2Q9H009 215 aa21.55■■□□□ 1.04
SMNDC1-201ENST00000369592 NDST4Q9H3R1 872 aa21.55■■□□□ 1.04
SMNDC1-201ENST00000369592 LRRC4Q9HBW1 653 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms