RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 UBXN6Q9BZV1 441 aa9.26□□□□□ -0.93
SNX27-201ENST00000368838 SDCBP2Q9H190 292 aa9.26□□□□□ -0.93
SNX27-201ENST00000368838 CARD9Q9H257 536 aa9.26□□□□□ -0.93
SNX27-201ENST00000368838 ZDHHC7Q9NXF8 308 aa9.26□□□□□ -0.93
SNX27-201ENST00000368838 TRIM10Q9UDY6 481 aa9.26□□□□□ -0.93
SNX27-201ENST00000368838 DPP7Q9UHL4 492 aa9.26□□□□□ -0.93
SNX27-201ENST00000368838 DSEQ9UL01 958 aa9.26□□□□□ -0.93
SNX27-201ENST00000368838 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.26□□□□□ -0.93
SNX27-201ENST00000368838 HYOU1Q9Y4L1 999 aa9.26□□□□□ -0.93
SNX27-201ENST00000368838 CDY1Q9Y6F8 540 aa9.26□□□□□ -0.93
SNX27-201ENST00000368838 R4GN57 208 aa9.26□□□□□ -0.93
SNX27-201ENST00000368838 MACROD2A1Z1Q3 448 aa9.25□□□□□ -0.93
SNX27-201ENST00000368838 HUS1O60921 280 aa9.25□□□□□ -0.93
SNX27-201ENST00000368838 B3GAT3O94766 335 aa9.25□□□□□ -0.93
SNX27-201ENST00000368838 SRFP11831 508 aa9.25□□□□□ -0.93
SNX27-201ENST00000368838 TYMPP19971 482 aa9.25□□□□□ -0.93
SNX27-201ENST00000368838 CD72P21854 359 aa9.25□□□□□ -0.93
SNX27-201ENST00000368838 GPD2P43304 727 aa9.25□□□□□ -0.93
SNX27-201ENST00000368838 CREMQ03060 361 aa9.25□□□□□ -0.93
SNX27-201ENST00000368838 CKAP4Q07065 602 aaKnown RBP9.25□□□□□ -0.93
SNX27-201ENST00000368838 ZNF268Q14587 947 aaPredicted RBP9.25□□□□□ -0.93
SNX27-201ENST00000368838 SGO2Q562F6 1265 aa9.25□□□□□ -0.93
SNX27-201ENST00000368838 LRRC38Q5VT99 294 aa9.25□□□□□ -0.93
SNX27-201ENST00000368838 SCARA3Q6AZY7 606 aa9.25□□□□□ -0.93
SNX27-201ENST00000368838 CD300LGQ6UXG3 332 aa9.25□□□□□ -0.93
SNX27-201ENST00000368838 NT5DC3Q86UY8 548 aa9.25□□□□□ -0.93
SNX27-201ENST00000368838 RASGEF1CQ8N431 466 aa9.25□□□□□ -0.93
SNX27-201ENST00000368838 WDTC1Q8N5D0 677 aa9.25□□□□□ -0.93
SNX27-201ENST00000368838 NIPA2Q8N8Q9 360 aa9.25□□□□□ -0.93
SNX27-201ENST00000368838 C3orf20Q8ND61 904 aa9.25□□□□□ -0.93
SNX27-201ENST00000368838 HDAC7Q8WUI4 952 aa9.25□□□□□ -0.93
SNX27-201ENST00000368838 KBTBD7Q8WVZ9 684 aa9.25□□□□□ -0.93
SNX27-201ENST00000368838 TFAP2BQ92481 460 aa9.25□□□□□ -0.93
SNX27-201ENST00000368838 FGF13Q92913 245 aa9.25□□□□□ -0.93
SNX27-201ENST00000368838 CYFIP2Q96F07 1278 aa9.25□□□□□ -0.93
SNX27-201ENST00000368838 PBKQ96KB5 322 aa9.25□□□□□ -0.93
SNX27-201ENST00000368838 NCAPGQ9BPX3 1015 aa9.25□□□□□ -0.93
SNX27-201ENST00000368838 RTP3Q9BQQ7 232 aa9.25□□□□□ -0.93
SNX27-201ENST00000368838 OXCT2Q9BYC2 517 aaPredicted RBP9.25□□□□□ -0.93
SNX27-201ENST00000368838 ELOVL4Q9GZR5 314 aa9.25□□□□□ -0.93
SNX27-201ENST00000368838 THAP2Q9H0W7 228 aa9.25□□□□□ -0.93
SNX27-201ENST00000368838 ARHGEF3Q9NR81 526 aa9.25□□□□□ -0.93
SNX27-201ENST00000368838 PARVAQ9NVD7 372 aa9.25□□□□□ -0.93
SNX27-201ENST00000368838 TMEM51Q9NW97 253 aa9.25□□□□□ -0.93
SNX27-201ENST00000368838 TAS2R14Q9NYV8 317 aa9.25□□□□□ -0.93
SNX27-201ENST00000368838 WNT16Q9UBV4 365 aa9.25□□□□□ -0.93
SNX27-201ENST00000368838 TUBGCP4Q9UGJ1 667 aa9.25□□□□□ -0.93
SNX27-201ENST00000368838 COL4A2P08572 1712 aa9.25□□□□□ -0.93
SNX27-201ENST00000368838 OBSL1O75147 1896 aa9.25□□□□□ -0.93
SNX27-201ENST00000368838 FRYLO94915 3013 aa9.24□□□□□ -0.93
SNX27-201ENST00000368838 CCDC66A2RUB6 948 aa9.24□□□□□ -0.93
SNX27-201ENST00000368838 PROB1E7EW31 1015 aa9.24□□□□□ -0.93
SNX27-201ENST00000368838 ANHXE9PGG2 379 aa9.24□□□□□ -0.93
SNX27-201ENST00000368838 DYNC1I1O14576 645 aa9.24□□□□□ -0.93
SNX27-201ENST00000368838 THAP12O43422 761 aa9.24□□□□□ -0.93
SNX27-201ENST00000368838 PALMO75781 387 aa9.24□□□□□ -0.93
SNX27-201ENST00000368838 URI1O94763 535 aaPredicted RBP9.24□□□□□ -0.93
SNX27-201ENST00000368838 MOCS3O95396 460 aa9.24□□□□□ -0.93
SNX27-201ENST00000368838 GLULP15104 373 aa9.24□□□□□ -0.93
SNX27-201ENST00000368838 FGFR3P22607 806 aa9.24□□□□□ -0.93
SNX27-201ENST00000368838 CTNNA2P26232 953 aa9.24□□□□□ -0.93
SNX27-201ENST00000368838 NDST1P52848 882 aa9.24□□□□□ -0.93
SNX27-201ENST00000368838 PPP2R5EQ16537 467 aa9.24□□□□□ -0.93
SNX27-201ENST00000368838 TMEM110Q86TL2 294 aa9.24□□□□□ -0.93
SNX27-201ENST00000368838 CREG2Q8IUH2 290 aa9.24□□□□□ -0.93
SNX27-201ENST00000368838 GPR65Q8IYL9 337 aa9.24□□□□□ -0.93
SNX27-201ENST00000368838 SCML4Q8N228 414 aa9.24□□□□□ -0.93
SNX27-201ENST00000368838 C1orf131Q8NDD1 294 aaKnown RBP9.24□□□□□ -0.93
SNX27-201ENST00000368838 APPL2Q8NEU8 664 aa9.24□□□□□ -0.93
SNX27-201ENST00000368838 ACTRT1Q8TDG2 376 aa9.24□□□□□ -0.93
SNX27-201ENST00000368838 SLC35F5Q8WV83 523 aa9.24□□□□□ -0.93
SNX27-201ENST00000368838 RUBCNQ92622 972 aa9.24□□□□□ -0.93
SNX27-201ENST00000368838 CD101Q93033 1021 aa9.24□□□□□ -0.93
SNX27-201ENST00000368838 C18orf25Q96B23 403 aaPredicted RBP9.24□□□□□ -0.93
SNX27-201ENST00000368838 MCRS1Q96EZ8 462 aa9.24□□□□□ -0.93
SNX27-201ENST00000368838 FAM84AQ96KN4 292 aa9.24□□□□□ -0.93
SNX27-201ENST00000368838 HSFY1Q96LI6 401 aa9.24□□□□□ -0.93
SNX27-201ENST00000368838 HNRNPABQ99729 332 aaKnown RBP9.24□□□□□ -0.93
SNX27-201ENST00000368838 SLC4A5Q9BY07 1137 aa9.24□□□□□ -0.93
SNX27-201ENST00000368838 SMYD3Q9H7B4 428 aa9.24□□□□□ -0.93
SNX27-201ENST00000368838 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.24□□□□□ -0.93
SNX27-201ENST00000368838 ADAM22Q9P0K1 906 aa9.24□□□□□ -0.93
SNX27-201ENST00000368838 DNMT3BQ9UBC3 853 aaKnown RBP9.24□□□□□ -0.93
SNX27-201ENST00000368838 NXF1Q9UBU9 619 aaKnown RBP9.24□□□□□ -0.93
SNX27-201ENST00000368838 CDH7Q9ULB5 785 aa9.24□□□□□ -0.93
SNX27-201ENST00000368838 SNX9Q9Y5X1 595 aa9.24□□□□□ -0.93
SNX27-201ENST00000368838 F5P12259 2224 aa9.24□□□□□ -0.93
SNX27-201ENST00000368838 OTOGLQ3ZCN5 2332 aa9.23□□□□□ -0.93
SNX27-201ENST00000368838 NUP210Q8TEM1 1887 aaPredicted RBP9.23□□□□□ -0.93
SNX27-201ENST00000368838 DMXL1Q9Y485 3027 aa9.23□□□□□ -0.93
SNX27-201ENST00000368838 DCHS1Q96JQ0 3298 aa9.23□□□□□ -0.93
SNX27-201ENST00000368838 TMEM191CA6NGB0 347 aa9.23□□□□□ -0.93
SNX27-201ENST00000368838 SIGLEC16A6NMB1 481 aa9.23□□□□□ -0.93
SNX27-201ENST00000368838 PODXLO00592 558 aa9.23□□□□□ -0.93
SNX27-201ENST00000368838 BUB1BO60566 1050 aaPredicted RBP9.23□□□□□ -0.93
SNX27-201ENST00000368838 ERBB2P04626 1255 aa9.23□□□□□ -0.93
SNX27-201ENST00000368838 ATP1A1P05023 1023 aaKnown RBP9.23□□□□□ -0.93
SNX27-201ENST00000368838 CDR1P51861 262 aa9.23□□□□□ -0.93
SNX27-201ENST00000368838 ROR1Q01973 937 aa9.23□□□□□ -0.93
SNX27-201ENST00000368838 ELAVL2Q12926 359 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms