RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 CCDC173Q0VFZ6 552 aa15.82■□□□□ 0.12
SMPDL3A-201ENST00000368440 ARHGAP29Q52LW3 1261 aa15.82■□□□□ 0.12
SMPDL3A-201ENST00000368440 C10orf120Q5SQS8 335 aa15.82■□□□□ 0.12
SMPDL3A-201ENST00000368440 SCML4Q8N228 414 aa15.82■□□□□ 0.12
SMPDL3A-201ENST00000368440 STK32AQ8WU08 396 aa15.82■□□□□ 0.12
SMPDL3A-201ENST00000368440 EDEM1Q92611 657 aa15.82■□□□□ 0.12
SMPDL3A-201ENST00000368440 IRF7Q92985 503 aa15.82■□□□□ 0.12
SMPDL3A-201ENST00000368440 PIWIL1Q96J94 861 aaKnown RBP15.82■□□□□ 0.12
SMPDL3A-201ENST00000368440 FAM83CQ9BQN1 747 aa15.82■□□□□ 0.12
SMPDL3A-201ENST00000368440 XPO4Q9C0E2 1151 aaKnown RBP15.82■□□□□ 0.12
SMPDL3A-201ENST00000368440 NACA2Q9H009 215 aa15.82■□□□□ 0.12
SMPDL3A-201ENST00000368440 ARHGEF3Q9NR81 526 aa15.82■□□□□ 0.12
SMPDL3A-201ENST00000368440 GTSE1Q9NYZ3 720 aa15.82■□□□□ 0.12
SMPDL3A-201ENST00000368440 CFAP97Q9P2B7 532 aa15.82■□□□□ 0.12
SMPDL3A-201ENST00000368440 PAPSS1O43252 624 aaPredicted RBP15.81■□□□□ 0.12
SMPDL3A-201ENST00000368440 GPR37L1O60883 481 aa15.81■□□□□ 0.12
SMPDL3A-201ENST00000368440 IRF1P10914 325 aa15.81■□□□□ 0.12
SMPDL3A-201ENST00000368440 ARSAP15289 507 aa15.81■□□□□ 0.12
SMPDL3A-201ENST00000368440 CHRNB2P17787 502 aa15.81■□□□□ 0.12
SMPDL3A-201ENST00000368440 ATP5C1P36542 298 aaKnown RBP15.81■□□□□ 0.12
SMPDL3A-201ENST00000368440 PFKPQ01813 784 aa15.81■□□□□ 0.12
SMPDL3A-201ENST00000368440 SLC44A4Q53GD3 710 aa15.81■□□□□ 0.12
SMPDL3A-201ENST00000368440 BSPRYQ5W0U4 402 aa15.81■□□□□ 0.12
SMPDL3A-201ENST00000368440 TMEM110Q86TL2 294 aa15.81■□□□□ 0.12
SMPDL3A-201ENST00000368440 ARHGAP18Q8N392 663 aa15.81■□□□□ 0.12
SMPDL3A-201ENST00000368440 DNASE1L2Q92874 299 aa15.81■□□□□ 0.12
SMPDL3A-201ENST00000368440 HPS4Q9NQG7 708 aa15.81■□□□□ 0.12
SMPDL3A-201ENST00000368440 KMT2EQ8IZD2 1858 aa15.8■□□□□ 0.12
SMPDL3A-201ENST00000368440 SHISA7A6NL88 538 aa15.8■□□□□ 0.12
SMPDL3A-201ENST00000368440 RALAP11233 206 aa15.8■□□□□ 0.12
SMPDL3A-201ENST00000368440 CDH5P33151 784 aaPredicted RBP15.8■□□□□ 0.12
SMPDL3A-201ENST00000368440 ACADSBP45954 432 aa15.8■□□□□ 0.12
SMPDL3A-201ENST00000368440 SOX9P48436 509 aa15.8■□□□□ 0.12
SMPDL3A-201ENST00000368440 FMO1Q01740 532 aa15.8■□□□□ 0.12
SMPDL3A-201ENST00000368440 EFEMP1Q12805 493 aa15.8■□□□□ 0.12
SMPDL3A-201ENST00000368440 MLF2Q15773 248 aaPredicted RBP15.8■□□□□ 0.12
SMPDL3A-201ENST00000368440 PTPN20Q4JDL3 420 aa15.8■□□□□ 0.12
SMPDL3A-201ENST00000368440 BTBD8Q5XKL5 378 aa15.8■□□□□ 0.12
SMPDL3A-201ENST00000368440 E4F1Q66K89 784 aaPredicted RBP15.8■□□□□ 0.12
SMPDL3A-201ENST00000368440 ZNF276Q8N554 614 aa15.8■□□□□ 0.12
SMPDL3A-201ENST00000368440 PPP1R13BQ96KQ4 1090 aa15.8■□□□□ 0.12
SMPDL3A-201ENST00000368440 C1QTNF1Q9BXJ1 281 aa15.8■□□□□ 0.12
SMPDL3A-201ENST00000368440 KLF16Q9BXK1 252 aaPredicted RBP15.8■□□□□ 0.12
SMPDL3A-201ENST00000368440 TRIM5Q9C035 493 aa15.8■□□□□ 0.12
SMPDL3A-201ENST00000368440 PDCL3Q9H2J4 239 aa15.8■□□□□ 0.12
SMPDL3A-201ENST00000368440 EBF3Q9H4W6 596 aa15.8■□□□□ 0.12
SMPDL3A-201ENST00000368440 THG1LQ9NWX6 298 aaKnown RBP15.8■□□□□ 0.12
SMPDL3A-201ENST00000368440 RASAL2Q9UJF2 1139 aa15.8■□□□□ 0.12
SMPDL3A-201ENST00000368440 OTOL1A6NHN0 477 aaPredicted RBP15.8■□□□□ 0.12
SMPDL3A-201ENST00000368440 LRRC53A6NM62 1247 aa15.8■□□□□ 0.12
SMPDL3A-201ENST00000368440 FBXO21O94952 628 aa15.8■□□□□ 0.12
SMPDL3A-201ENST00000368440 LTFP02788 710 aa15.8■□□□□ 0.12
SMPDL3A-201ENST00000368440 ERBB2P04626 1255 aa15.8■□□□□ 0.12
SMPDL3A-201ENST00000368440 CDR2Q01850 454 aa15.8■□□□□ 0.12
SMPDL3A-201ENST00000368440 TMEM31Q5JXX7 168 aa15.8■□□□□ 0.12
SMPDL3A-201ENST00000368440 CC2D1AQ6P1N0 951 aaPredicted RBP15.8■□□□□ 0.12
SMPDL3A-201ENST00000368440 KLHDC10Q6PID8 442 aa15.8■□□□□ 0.12
SMPDL3A-201ENST00000368440 MIB1Q86YT6 1006 aa15.8■□□□□ 0.12
SMPDL3A-201ENST00000368440 OSCP1Q8WVF1 389 aa15.8■□□□□ 0.12
SMPDL3A-201ENST00000368440 IRGQQ8WZA9 623 aa15.8■□□□□ 0.12
SMPDL3A-201ENST00000368440 PBXIP1Q96AQ6 731 aa15.8■□□□□ 0.12
SMPDL3A-201ENST00000368440 LRFN3Q9BTN0 628 aa15.8■□□□□ 0.12
SMPDL3A-201ENST00000368440 LINC00597Q9H2U6 94 aa15.8■□□□□ 0.12
SMPDL3A-201ENST00000368440 TRPV5Q9NQA5 729 aa15.8■□□□□ 0.12
SMPDL3A-201ENST00000368440 DUS2Q9NX74 493 aaKnown RBP15.8■□□□□ 0.12
SMPDL3A-201ENST00000368440 DNMT3LQ9UJW3 386 aa15.8■□□□□ 0.12
SMPDL3A-201ENST00000368440 GREM1O60565 184 aa15.79■□□□□ 0.12
SMPDL3A-201ENST00000368440 FYNP06241 537 aa15.79■□□□□ 0.12
SMPDL3A-201ENST00000368440 CD72P21854 359 aa15.79■□□□□ 0.12
SMPDL3A-201ENST00000368440 NOMO3P69849 1222 aa15.79■□□□□ 0.12
SMPDL3A-201ENST00000368440 EML3Q32P44 896 aa15.79■□□□□ 0.12
SMPDL3A-201ENST00000368440 CWF19L1Q69YN2 538 aaKnown RBP15.79■□□□□ 0.12
SMPDL3A-201ENST00000368440 TPRG1Q6ZUI0 275 aa15.79■□□□□ 0.12
SMPDL3A-201ENST00000368440 RSRC2Q7L4I2 434 aaKnown RBP15.79■□□□□ 0.12
SMPDL3A-201ENST00000368440 ZNF677Q86XU0 584 aa15.79■□□□□ 0.12
SMPDL3A-201ENST00000368440 TMEM35BQ8NCS4 154 aa15.79■□□□□ 0.12
SMPDL3A-201ENST00000368440 CSGALNACT1Q8TDX6 532 aa15.79■□□□□ 0.12
SMPDL3A-201ENST00000368440 CEP83Q9Y592 693 aa15.79■□□□□ 0.12
SMPDL3A-201ENST00000368440 PRR33A8MZF0 331 aa15.78■□□□□ 0.12
SMPDL3A-201ENST00000368440 IFNAR2P48551 515 aa15.78■□□□□ 0.12
SMPDL3A-201ENST00000368440 TAF5Q15542 800 aa15.78■□□□□ 0.12
SMPDL3A-201ENST00000368440 C2CD6Q53TS8 623 aa15.78■□□□□ 0.12
SMPDL3A-201ENST00000368440 FAM183BPQ6ZVS7 135 aa15.78■□□□□ 0.12
SMPDL3A-201ENST00000368440 IRF2BP2Q7Z5L9 587 aa15.78■□□□□ 0.12
SMPDL3A-201ENST00000368440 BMP8AQ7Z5Y6 402 aa15.78■□□□□ 0.12
SMPDL3A-201ENST00000368440 DDX42Q86XP3 938 aaKnown RBP eCLIP15.78■□□□□ 0.12
SMPDL3A-201ENST00000368440 FLCNQ8NFG4 579 aa15.78■□□□□ 0.12
SMPDL3A-201ENST00000368440 OLIG1Q8TAK6 271 aa15.78■□□□□ 0.12
SMPDL3A-201ENST00000368440 CPA5Q8WXQ8 436 aa15.78■□□□□ 0.12
SMPDL3A-201ENST00000368440 CHFRQ96EP1 664 aa15.78■□□□□ 0.12
SMPDL3A-201ENST00000368440 PCDHB18PQ96TA0 734 aa15.78■□□□□ 0.12
SMPDL3A-201ENST00000368440 TBC1D17Q9HA65 648 aa15.78■□□□□ 0.12
SMPDL3A-201ENST00000368440 ABCC13Q9NSE7 274 aa15.78■□□□□ 0.12
SMPDL3A-201ENST00000368440 MARCH2Q9P0N8 246 aa15.78■□□□□ 0.12
SMPDL3A-201ENST00000368440 SFMBT1Q9UHJ3 866 aa15.78■□□□□ 0.12
SMPDL3A-201ENST00000368440 PIAS3Q9Y6X2 628 aa15.78■□□□□ 0.12
SMPDL3A-201ENST00000368440 MIA3Q5JRA6 1907 aa15.78■□□□□ 0.12
SMPDL3A-201ENST00000368440 CYP1A1P04798 512 aaPredicted RBP15.78■□□□□ 0.12
SMPDL3A-201ENST00000368440 HMBSP08397 361 aa15.78■□□□□ 0.12
SMPDL3A-201ENST00000368440 RUNX3Q13761 415 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms