RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 GPRIN1Q7Z2K8 1008 aa16.92■□□□□ 0.3
CKS1B-202ENST00000368436 CYP2U1Q7Z449 544 aa16.92■□□□□ 0.3
CKS1B-202ENST00000368436 SPRYD3Q8NCJ5 442 aa16.92■□□□□ 0.3
CKS1B-202ENST00000368436 NACA2Q9H009 215 aa16.92■□□□□ 0.3
CKS1B-202ENST00000368436 CYP3A43Q9HB55 503 aa16.92■□□□□ 0.3
CKS1B-202ENST00000368436 OSER1Q9NX31 292 aa16.92■□□□□ 0.3
CKS1B-202ENST00000368436 ANGPTL2Q9UKU9 493 aa16.92■□□□□ 0.3
CKS1B-202ENST00000368436 HCN2Q9UL51 889 aa16.92■□□□□ 0.3
CKS1B-202ENST00000368436 MAP1BP46821 2468 aaKnown RBP16.91■□□□□ 0.3
CKS1B-202ENST00000368436 KRT37O76014 449 aa16.91■□□□□ 0.3
CKS1B-202ENST00000368436 TBX18O95935 607 aa16.91■□□□□ 0.3
CKS1B-202ENST00000368436 IRF1P10914 325 aa16.91■□□□□ 0.3
CKS1B-202ENST00000368436 NR2F2P24468 414 aa16.91■□□□□ 0.3
CKS1B-202ENST00000368436 ADORA2BP29275 332 aa16.91■□□□□ 0.3
CKS1B-202ENST00000368436 ATP5C1P36542 298 aaKnown RBP16.91■□□□□ 0.3
CKS1B-202ENST00000368436 SYKP43405 635 aa16.91■□□□□ 0.3
CKS1B-202ENST00000368436 DHPSP49366 369 aaPredicted RBP16.91■□□□□ 0.3
CKS1B-202ENST00000368436 PPP3CAQ08209 521 aa16.91■□□□□ 0.3
CKS1B-202ENST00000368436 DPYDQ12882 1025 aa16.91■□□□□ 0.3
CKS1B-202ENST00000368436 BYSLQ13895 437 aaKnown RBP16.91■□□□□ 0.3
CKS1B-202ENST00000368436 ANO4Q32M45 955 aa16.91■□□□□ 0.3
CKS1B-202ENST00000368436 SPDYCQ5MJ68 293 aa16.91■□□□□ 0.3
CKS1B-202ENST00000368436 KLHDC10Q6PID8 442 aa16.91■□□□□ 0.3
CKS1B-202ENST00000368436 NUDT18Q6ZVK8 323 aa16.91■□□□□ 0.3
CKS1B-202ENST00000368436 INTS8Q75QN2 995 aaKnown RBP16.91■□□□□ 0.3
CKS1B-202ENST00000368436 LPCAT2Q7L5N7 544 aa16.91■□□□□ 0.3
CKS1B-202ENST00000368436 TRMT11Q7Z4G4 463 aaKnown RBP16.91■□□□□ 0.3
CKS1B-202ENST00000368436 FRMD1Q8N878 549 aa16.91■□□□□ 0.3
CKS1B-202ENST00000368436 TERB1Q8NA31 727 aa16.91■□□□□ 0.3
CKS1B-202ENST00000368436 TAS1R2Q8TE23 839 aa16.91■□□□□ 0.3
CKS1B-202ENST00000368436 RLN3Q8WXF3 142 aa16.91■□□□□ 0.3
CKS1B-202ENST00000368436 CYFIP2Q96F07 1278 aa16.91■□□□□ 0.3
CKS1B-202ENST00000368436 SPATA32Q96LK8 384 aa16.91■□□□□ 0.3
CKS1B-202ENST00000368436 NT5C1AQ9BXI3 368 aa16.91■□□□□ 0.3
CKS1B-202ENST00000368436 APOBEC3GQ9HC16 384 aaKnown RBP16.91■□□□□ 0.3
CKS1B-202ENST00000368436 PNPLA8Q9NP80 782 aa16.91■□□□□ 0.3
CKS1B-202ENST00000368436 EVLQ9UI08 416 aaPredicted RBP16.91■□□□□ 0.3
CKS1B-202ENST00000368436 MBD1Q9UIS9 605 aaPredicted RBP16.91■□□□□ 0.3
CKS1B-202ENST00000368436 ZDHHC9Q9Y397 364 aa16.91■□□□□ 0.3
CKS1B-202ENST00000368436 PCDHA5Q9Y5H7 936 aa16.91■□□□□ 0.3
CKS1B-202ENST00000368436 TCRBV21S2A2A0A5A6 115 aa16.9■□□□□ 0.3
CKS1B-202ENST00000368436 PATE3B3GLJ2 98 aa16.9■□□□□ 0.3
CKS1B-202ENST00000368436 CDX4O14627 284 aaPredicted RBP16.9■□□□□ 0.3
CKS1B-202ENST00000368436 TRIM24O15164 1050 aa16.9■□□□□ 0.3
CKS1B-202ENST00000368436 PRR29P0C7W0 189 aa16.9■□□□□ 0.3
CKS1B-202ENST00000368436 TRIM21P19474 475 aaKnown RBP16.9■□□□□ 0.3
CKS1B-202ENST00000368436 GCLMP48507 274 aa16.9■□□□□ 0.3
CKS1B-202ENST00000368436 NDUFA8P51970 172 aa16.9■□□□□ 0.3
CKS1B-202ENST00000368436 KRT85P78386 507 aa16.9■□□□□ 0.3
CKS1B-202ENST00000368436 IRX4P78413 519 aa16.9■□□□□ 0.3
CKS1B-202ENST00000368436 ST3GAL2Q16842 350 aa16.9■□□□□ 0.3
CKS1B-202ENST00000368436 GUF1Q8N442 669 aaKnown RBP16.9■□□□□ 0.3
CKS1B-202ENST00000368436 ZNF276Q8N554 614 aa16.9■□□□□ 0.3
CKS1B-202ENST00000368436 ZNF513Q8N8E2 541 aaPredicted RBP16.9■□□□□ 0.3
CKS1B-202ENST00000368436 HMGB4Q8WW32 186 aa16.9■□□□□ 0.3
CKS1B-202ENST00000368436 PIGKQ92643 395 aa16.9■□□□□ 0.3
CKS1B-202ENST00000368436 CCDC47Q96A33 483 aaKnown RBP16.9■□□□□ 0.3
CKS1B-202ENST00000368436 CHAMP1Q96JM3 812 aa16.9■□□□□ 0.3
CKS1B-202ENST00000368436 SPACA7Q96KW9 195 aa16.9■□□□□ 0.3
CKS1B-202ENST00000368436 IMPG2Q9BZV3 1241 aa16.9■□□□□ 0.3
CKS1B-202ENST00000368436 NMUR1Q9HB89 426 aa16.9■□□□□ 0.3
CKS1B-202ENST00000368436 TMEM9BQ9NQ34 198 aa16.9■□□□□ 0.3
CKS1B-202ENST00000368436 MARK1Q9P0L2 795 aa16.9■□□□□ 0.3
CKS1B-202ENST00000368436 BCCIPQ9P287 314 aaKnown RBP eCLIP16.9■□□□□ 0.3
CKS1B-202ENST00000368436 WDR35Q9P2L0 1181 aa16.9■□□□□ 0.3
CKS1B-202ENST00000368436 CHD8Q9HCK8 2581 aa16.9■□□□□ 0.3
CKS1B-202ENST00000368436 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.89■□□□□ 0.29
CKS1B-202ENST00000368436 CYP26A1O43174 497 aa16.89■□□□□ 0.29
CKS1B-202ENST00000368436 MAP3K13O43283 966 aa16.89■□□□□ 0.29
CKS1B-202ENST00000368436 CACNG3O60359 315 aa16.89■□□□□ 0.29
CKS1B-202ENST00000368436 CILPO75339 1184 aa16.89■□□□□ 0.29
CKS1B-202ENST00000368436 TRIM49P0CI25 452 aa16.89■□□□□ 0.29
CKS1B-202ENST00000368436 TRIM49CP0CI26 452 aa16.89■□□□□ 0.29
CKS1B-202ENST00000368436 ACO1P21399 889 aaKnown RBP16.89■□□□□ 0.29
CKS1B-202ENST00000368436 NTSR1P30989 418 aa16.89■□□□□ 0.29
CKS1B-202ENST00000368436 PI4KAP42356 2102 aa16.89■□□□□ 0.29
CKS1B-202ENST00000368436 GOLGA8FQ08AF8 430 aa16.89■□□□□ 0.29
CKS1B-202ENST00000368436 GOLGA8DPQ0D2H9 430 aa16.89■□□□□ 0.29
CKS1B-202ENST00000368436 C10orf76Q5T2E6 689 aa16.89■□□□□ 0.29
CKS1B-202ENST00000368436 DAB2IPQ5VWQ8 1189 aa16.89■□□□□ 0.29
CKS1B-202ENST00000368436 GRAMD4Q6IC98 578 aa16.89■□□□□ 0.29
CKS1B-202ENST00000368436 PSAPL1Q6NUJ1 521 aa16.89■□□□□ 0.29
CKS1B-202ENST00000368436 FAM186BQ8IYM0 893 aa16.89■□□□□ 0.29
CKS1B-202ENST00000368436 TMEFF1Q8IYR6 380 aa16.89■□□□□ 0.29
CKS1B-202ENST00000368436 NIF3L1Q9GZT8 377 aa16.89■□□□□ 0.29
CKS1B-202ENST00000368436 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.89■□□□□ 0.29
CKS1B-202ENST00000368436 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.89■□□□□ 0.29
CKS1B-202ENST00000368436 MAPK8IP1Q9UQF2 711 aa16.89■□□□□ 0.29
CKS1B-202ENST00000368436 LAMA1P25391 3075 aa16.89■□□□□ 0.29
CKS1B-202ENST00000368436 A0A1W2PQH9 124 aa16.88■□□□□ 0.29
CKS1B-202ENST00000368436 NEDD8-MDP1E9PL57 170 aa16.88■□□□□ 0.29
CKS1B-202ENST00000368436 RARGP13631 454 aa16.88■□□□□ 0.29
CKS1B-202ENST00000368436 KRT13P13646 458 aa16.88■□□□□ 0.29
CKS1B-202ENST00000368436 GABRG2P18507 467 aa16.88■□□□□ 0.29
CKS1B-202ENST00000368436 RPL13P26373 211 aaKnown RBP16.88■□□□□ 0.29
CKS1B-202ENST00000368436 PSMC2P35998 433 aaKnown RBP16.88■□□□□ 0.29
CKS1B-202ENST00000368436 PTGER3P43115 390 aa16.88■□□□□ 0.29
CKS1B-202ENST00000368436 PLA2G4AP47712 749 aa16.88■□□□□ 0.29
CKS1B-202ENST00000368436 KIF11P52732 1056 aa16.88■□□□□ 0.29
CKS1B-202ENST00000368436 ZCWPW2Q504Y3 356 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms