RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 KPNA1P52294 538 aaPredicted RBP23.56■■□□□ 1.36
ECHDC1-203ENST00000368291 YWHAGP61981 247 aaKnown RBP eCLIP23.56■■□□□ 1.36
ECHDC1-203ENST00000368291 PTK2Q05397 1052 aa23.56■■□□□ 1.36
ECHDC1-203ENST00000368291 SYCP1Q15431 976 aa23.56■■□□□ 1.36
ECHDC1-203ENST00000368291 KLHDC10Q6PID8 442 aa23.56■■□□□ 1.36
ECHDC1-203ENST00000368291 TXNDC11Q6PKC3 985 aa23.56■■□□□ 1.36
ECHDC1-203ENST00000368291 ZNF852Q6ZMS4 543 aa23.56■■□□□ 1.36
ECHDC1-203ENST00000368291 DDX42Q86XP3 938 aaKnown RBP eCLIP23.56■■□□□ 1.36
ECHDC1-203ENST00000368291 WDTC1Q8N5D0 677 aa23.56■■□□□ 1.36
ECHDC1-203ENST00000368291 ERGIC2Q96RQ1 377 aa23.56■■□□□ 1.36
ECHDC1-203ENST00000368291 STK33Q9BYT3 514 aa23.56■■□□□ 1.36
ECHDC1-203ENST00000368291 C8orf33Q9H7E9 229 aaPredicted RBP23.56■■□□□ 1.36
ECHDC1-203ENST00000368291 CNGB3Q9NQW8 809 aa23.56■■□□□ 1.36
ECHDC1-203ENST00000368291 YJEFN3A6XGL0 299 aa23.55■■□□□ 1.36
ECHDC1-203ENST00000368291 E7ENQ6 273 aa23.55■■□□□ 1.36
ECHDC1-203ENST00000368291 SPECC1L-ADORA2AF8WAN1 911 aa23.55■■□□□ 1.36
ECHDC1-203ENST00000368291 MAN2B1O00754 1011 aa23.55■■□□□ 1.36
ECHDC1-203ENST00000368291 GREM1O60565 184 aa23.55■■□□□ 1.36
ECHDC1-203ENST00000368291 DCNP07585 359 aaKnown RBP23.55■■□□□ 1.36
ECHDC1-203ENST00000368291 IFNAR2P48551 515 aa23.55■■□□□ 1.36
ECHDC1-203ENST00000368291 DAOAP59103 153 aa23.55■■□□□ 1.36
ECHDC1-203ENST00000368291 UBXN1Q04323 297 aa23.55■■□□□ 1.36
ECHDC1-203ENST00000368291 UBXN2BQ14CS0 331 aa23.55■■□□□ 1.36
ECHDC1-203ENST00000368291 NFKBIBQ15653 356 aa23.55■■□□□ 1.36
ECHDC1-203ENST00000368291 RALGPS2Q86X27 583 aaPredicted RBP23.55■■□□□ 1.36
ECHDC1-203ENST00000368291 FAM3CQ92520 227 aa23.55■■□□□ 1.36
ECHDC1-203ENST00000368291 OSBPL6Q9BZF3 934 aa23.55■■□□□ 1.36
ECHDC1-203ENST00000368291 FAM207AQ9NSI2 230 aaPredicted RBP23.55■■□□□ 1.36
ECHDC1-203ENST00000368291 PCDHGC3Q9UN70 934 aa23.55■■□□□ 1.36
ECHDC1-203ENST00000368291 CACNA1IQ9P0X4 2223 aa23.54■■□□□ 1.36
ECHDC1-203ENST00000368291 FAM170BA6NMN3 283 aa23.54■■□□□ 1.36
ECHDC1-203ENST00000368291 F8VZ95 297 aa23.54■■□□□ 1.36
ECHDC1-203ENST00000368291 TEX33O43247 280 aa23.54■■□□□ 1.36
ECHDC1-203ENST00000368291 RALAP11233 206 aa23.54■■□□□ 1.36
ECHDC1-203ENST00000368291 C10orf120Q5SQS8 335 aa23.54■■□□□ 1.36
ECHDC1-203ENST00000368291 LUZP1Q86V48 1076 aa23.54■■□□□ 1.36
ECHDC1-203ENST00000368291 SIX6OS1Q8N1H7 587 aa23.54■■□□□ 1.36
ECHDC1-203ENST00000368291 ARHGAP18Q8N392 663 aa23.54■■□□□ 1.36
ECHDC1-203ENST00000368291 CLEC4CQ8WTT0 213 aa23.54■■□□□ 1.36
ECHDC1-203ENST00000368291 MSANTD3Q96H12 275 aa23.54■■□□□ 1.36
ECHDC1-203ENST00000368291 SLC4A5Q9BY07 1137 aa23.54■■□□□ 1.36
ECHDC1-203ENST00000368291 NACA2Q9H009 215 aa23.54■■□□□ 1.36
ECHDC1-203ENST00000368291 ECT2Q9H8V3 914 aa23.54■■□□□ 1.36
ECHDC1-203ENST00000368291 RTN4Q9NQC3 1192 aaKnown RBP23.54■■□□□ 1.36
ECHDC1-203ENST00000368291 DNMT3LQ9UJW3 386 aa23.54■■□□□ 1.36
ECHDC1-203ENST00000368291 ATG2BQ96BY7 2078 aa23.54■■□□□ 1.36
ECHDC1-203ENST00000368291 E2F8A0AVK6 867 aa23.53■■□□□ 1.36
ECHDC1-203ENST00000368291 JAM2P57087 298 aa23.53■■□□□ 1.36
ECHDC1-203ENST00000368291 POLR2FP61218 127 aaKnown RBP23.53■■□□□ 1.36
ECHDC1-203ENST00000368291 ADGRG2Q8IZP9 1017 aa23.53■■□□□ 1.36
ECHDC1-203ENST00000368291 STK32AQ8WU08 396 aa23.53■■□□□ 1.36
ECHDC1-203ENST00000368291 ATP2A3Q93084 1043 aa23.53■■□□□ 1.36
ECHDC1-203ENST00000368291 NELL2Q99435 816 aa23.53■■□□□ 1.36
ECHDC1-203ENST00000368291 NLRC4Q9NPP4 1024 aa23.53■■□□□ 1.36
ECHDC1-203ENST00000368291 NDRG2Q9UN36 371 aaKnown RBP23.53■■□□□ 1.36
ECHDC1-203ENST00000368291 IRF1P10914 325 aa23.52■■□□□ 1.36
ECHDC1-203ENST00000368291 CYP11B1P15538 503 aa23.52■■□□□ 1.36
ECHDC1-203ENST00000368291 GAB4Q2WGN9 574 aa23.52■■□□□ 1.36
ECHDC1-203ENST00000368291 BSPRYQ5W0U4 402 aa23.52■■□□□ 1.36
ECHDC1-203ENST00000368291 DDX1Q92499 740 aaKnown RBP23.52■■□□□ 1.36
ECHDC1-203ENST00000368291 CLDN23Q96B33 292 aa23.52■■□□□ 1.36
ECHDC1-203ENST00000368291 LHX5Q9H2C1 402 aa23.52■■□□□ 1.36
ECHDC1-203ENST00000368291 MRPS17Q9Y2R5 130 aaKnown RBP23.52■■□□□ 1.36
ECHDC1-203ENST00000368291 HCN4Q9Y3Q4 1203 aa23.52■■□□□ 1.36
ECHDC1-203ENST00000368291 GJA4P35212 333 aa23.52■■□□□ 1.36
ECHDC1-203ENST00000368291 BPIFB4P59827 614 aa23.52■■□□□ 1.36
ECHDC1-203ENST00000368291 BTBD8Q5XKL5 378 aa23.52■■□□□ 1.36
ECHDC1-203ENST00000368291 TMEM110Q86TL2 294 aa23.52■■□□□ 1.36
ECHDC1-203ENST00000368291 PASD1Q8IV76 773 aa23.52■■□□□ 1.36
ECHDC1-203ENST00000368291 CPA6Q8N4T0 437 aa23.52■■□□□ 1.36
ECHDC1-203ENST00000368291 PRSS33Q8NF86 280 aa23.52■■□□□ 1.36
ECHDC1-203ENST00000368291 IRGQQ8WZA9 623 aa23.52■■□□□ 1.36
ECHDC1-203ENST00000368291 NAP1L5Q96NT1 182 aaPredicted RBP23.52■■□□□ 1.36
ECHDC1-203ENST00000368291 CDK5RAP1Q96SZ6 601 aaKnown RBP23.52■■□□□ 1.36
ECHDC1-203ENST00000368291 MIS12Q9H081 205 aa23.52■■□□□ 1.36
ECHDC1-203ENST00000368291 ST7Q9NRC1 585 aa23.52■■□□□ 1.36
ECHDC1-203ENST00000368291 TJP2Q9UDY2 1190 aa23.52■■□□□ 1.36
ECHDC1-203ENST00000368291 SH3BP1Q9Y3L3 701 aa23.52■■□□□ 1.36
ECHDC1-203ENST00000368291 KIAA1549LQ6ZVL6 1849 aa23.51■■□□□ 1.35
ECHDC1-203ENST00000368291 E5RJQ4 531 aa23.51■■□□□ 1.35
ECHDC1-203ENST00000368291 STC2O76061 302 aa23.51■■□□□ 1.35
ECHDC1-203ENST00000368291 FBXO21O94952 628 aa23.51■■□□□ 1.35
ECHDC1-203ENST00000368291 CYP17A1P05093 508 aa23.51■■□□□ 1.35
ECHDC1-203ENST00000368291 ACADSBP45954 432 aa23.51■■□□□ 1.35
ECHDC1-203ENST00000368291 EFEMP1Q12805 493 aa23.51■■□□□ 1.35
ECHDC1-203ENST00000368291 PDCLQ13371 301 aa23.51■■□□□ 1.35
ECHDC1-203ENST00000368291 NAIF1Q69YI7 327 aaPredicted RBP23.51■■□□□ 1.35
ECHDC1-203ENST00000368291 C1orf228Q6PIY5 440 aa23.51■■□□□ 1.35
ECHDC1-203ENST00000368291 HTR3DQ70Z44 454 aa23.51■■□□□ 1.35
ECHDC1-203ENST00000368291 TADA2BQ86TJ2 420 aa23.51■■□□□ 1.35
ECHDC1-203ENST00000368291 MIB1Q86YT6 1006 aa23.51■■□□□ 1.35
ECHDC1-203ENST00000368291 BBS7Q8IWZ6 715 aa23.51■■□□□ 1.35
ECHDC1-203ENST00000368291 SCUBE3Q8IX30 993 aa23.51■■□□□ 1.35
ECHDC1-203ENST00000368291 DTWD2Q8NBA8 298 aa23.51■■□□□ 1.35
ECHDC1-203ENST00000368291 EDEM1Q92611 657 aa23.51■■□□□ 1.35
ECHDC1-203ENST00000368291 TBC1D14Q9P2M4 693 aa23.51■■□□□ 1.35
ECHDC1-203ENST00000368291 RASAL2Q9UJF2 1139 aa23.51■■□□□ 1.35
ECHDC1-203ENST00000368291 DAAM1Q9Y4D1 1078 aa23.51■■□□□ 1.35
ECHDC1-203ENST00000368291 MUC6Q6W4X9 2439 aa23.5■■□□□ 1.35
ECHDC1-203ENST00000368291 A0A1B0GTH6 734 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms