RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 AVPR1AP37288 418 aa12.72□□□□□ -0.37
PTPRK-203ENST00000368207 SEMA4DQ92854 862 aa12.72□□□□□ -0.37
PTPRK-203ENST00000368207 SYT17Q9BSW7 474 aa12.72□□□□□ -0.37
PTPRK-203ENST00000368207 ULBP1Q9BZM6 244 aa12.72□□□□□ -0.37
PTPRK-203ENST00000368207 TRIM17Q9Y577 477 aa12.72□□□□□ -0.37
PTPRK-203ENST00000368207 ENO3P13929 434 aaPredicted RBP12.72□□□□□ -0.37
PTPRK-203ENST00000368207 HMOX2P30519 316 aa12.72□□□□□ -0.37
PTPRK-203ENST00000368207 SSTR1P30872 391 aa12.72□□□□□ -0.37
PTPRK-203ENST00000368207 ELK3P41970 407 aa12.72□□□□□ -0.37
PTPRK-203ENST00000368207 CLK2P49760 499 aaKnown RBP12.72□□□□□ -0.37
PTPRK-203ENST00000368207 RAB27AP51159 221 aa12.72□□□□□ -0.37
PTPRK-203ENST00000368207 ARHGEF7Q14155 803 aa12.72□□□□□ -0.37
PTPRK-203ENST00000368207 ZBTB41Q5SVQ8 909 aa12.72□□□□□ -0.37
PTPRK-203ENST00000368207 TMC3Q7Z5M5 1100 aa12.72□□□□□ -0.37
PTPRK-203ENST00000368207 PARP9Q8IXQ6 854 aa12.72□□□□□ -0.37
PTPRK-203ENST00000368207 DTX3LQ8TDB6 740 aa12.72□□□□□ -0.37
PTPRK-203ENST00000368207 CCDC138Q96M89 665 aa12.72□□□□□ -0.37
PTPRK-203ENST00000368207 TSPYL2Q9H2G4 693 aaPredicted RBP12.72□□□□□ -0.37
PTPRK-203ENST00000368207 BTBD7Q9P203 1132 aa12.72□□□□□ -0.37
PTPRK-203ENST00000368207 URODP06132 367 aa12.72□□□□□ -0.37
PTPRK-203ENST00000368207 USP17L7P0C7H9 530 aa12.72□□□□□ -0.37
PTPRK-203ENST00000368207 HNRNPH3P31942 346 aaKnown RBP12.72□□□□□ -0.37
PTPRK-203ENST00000368207 MAMLD1Q13495 774 aa12.72□□□□□ -0.37
PTPRK-203ENST00000368207 PPP1R2P1Q96PQ5 205 aa12.72□□□□□ -0.37
PTPRK-203ENST00000368207 TBCBQ99426 244 aa12.72□□□□□ -0.37
PTPRK-203ENST00000368207 NT5MQ9NPB1 228 aa12.72□□□□□ -0.37
PTPRK-203ENST00000368207 CASS4Q9NQ75 786 aa12.72□□□□□ -0.37
PTPRK-203ENST00000368207 KLC4Q9NSK0 619 aa12.72□□□□□ -0.37
PTPRK-203ENST00000368207 RBM22Q9NW64 420 aaKnown RBP eCLIP12.72□□□□□ -0.37
PTPRK-203ENST00000368207 HIST1H2AGP0C0S8 130 aaPredicted RBP12.72□□□□□ -0.37
PTPRK-203ENST00000368207 HIST1H2ADP20671 130 aa12.72□□□□□ -0.37
PTPRK-203ENST00000368207 GLRBP48167 497 aa12.72□□□□□ -0.37
PTPRK-203ENST00000368207 RAD23BP54727 409 aa12.72□□□□□ -0.37
PTPRK-203ENST00000368207 RPL7AP62424 266 aaKnown RBP12.72□□□□□ -0.37
PTPRK-203ENST00000368207 CLEC4DQ8WXI8 215 aa12.72□□□□□ -0.37
PTPRK-203ENST00000368207 MRPS31Q92665 395 aaKnown RBP12.72□□□□□ -0.37
PTPRK-203ENST00000368207 ZBTB10Q96DT7 871 aa12.72□□□□□ -0.37
PTPRK-203ENST00000368207 HIST1H2AHQ96KK5 128 aa12.72□□□□□ -0.37
PTPRK-203ENST00000368207 HIST1H2AJQ99878 128 aa12.72□□□□□ -0.37
PTPRK-203ENST00000368207 H2AFJQ9BTM1 129 aa12.72□□□□□ -0.37
PTPRK-203ENST00000368207 LRRC40Q9H9A6 602 aa12.72□□□□□ -0.37
PTPRK-203ENST00000368207 HMX1Q9NP08 348 aaPredicted RBP12.72□□□□□ -0.37
PTPRK-203ENST00000368207 SMPD4Q9NXE4 827 aa12.72□□□□□ -0.37
PTPRK-203ENST00000368207 NSMCE4AQ9NXX6 385 aa12.72□□□□□ -0.37
PTPRK-203ENST00000368207 CHD2O14647 1828 aaKnown RBP12.71□□□□□ -0.37
PTPRK-203ENST00000368207 CCT8L1PA6NM43 557 aa12.71□□□□□ -0.37
PTPRK-203ENST00000368207 SUPT3HB4E1H0 165 aa12.71□□□□□ -0.37
PTPRK-203ENST00000368207 DNALI1O14645 258 aaPredicted RBP12.71□□□□□ -0.37
PTPRK-203ENST00000368207 E2F6O75461 281 aa12.71□□□□□ -0.37
PTPRK-203ENST00000368207 SUPT3HO75486 399 aa12.71□□□□□ -0.37
PTPRK-203ENST00000368207 RHOBTB1O94844 696 aa12.71□□□□□ -0.37
PTPRK-203ENST00000368207 ARF4P18085 180 aaPredicted RBP12.71□□□□□ -0.37
PTPRK-203ENST00000368207 CCR1P32246 355 aa12.71□□□□□ -0.37
PTPRK-203ENST00000368207 PTK6Q13882 451 aa12.71□□□□□ -0.37
PTPRK-203ENST00000368207 TMEM259Q4ZIN3 620 aa12.71□□□□□ -0.37
PTPRK-203ENST00000368207 LLGL2Q6P1M3 1020 aa12.71□□□□□ -0.37
PTPRK-203ENST00000368207 TMC7Q7Z402 723 aa12.71□□□□□ -0.37
PTPRK-203ENST00000368207 TSEN2Q8NCE0 465 aaKnown RBP12.71□□□□□ -0.37
PTPRK-203ENST00000368207 SMARCD1Q96GM5 515 aa12.71□□□□□ -0.37
PTPRK-203ENST00000368207 RNPEPQ9H4A4 650 aa12.71□□□□□ -0.37
PTPRK-203ENST00000368207 CHST12Q9NRB3 414 aa12.71□□□□□ -0.37
PTPRK-203ENST00000368207 IARS2Q9NSE4 1012 aaKnown RBP12.71□□□□□ -0.37
PTPRK-203ENST00000368207 NAALADL1Q9UQQ1 740 aa12.71□□□□□ -0.37
PTPRK-203ENST00000368207 FAM208AQ9UK61 1670 aaKnown RBP12.71□□□□□ -0.37
PTPRK-203ENST00000368207 NFKBIEO00221 500 aa12.71□□□□□ -0.37
PTPRK-203ENST00000368207 EGFRP00533 1210 aa12.71□□□□□ -0.37
PTPRK-203ENST00000368207 ASS1P00966 412 aaKnown RBP12.71□□□□□ -0.37
PTPRK-203ENST00000368207 PYGLP06737 847 aa12.71□□□□□ -0.37
PTPRK-203ENST00000368207 TPH1P17752 444 aa12.71□□□□□ -0.37
PTPRK-203ENST00000368207 RTP1P59025 263 aa12.71□□□□□ -0.37
PTPRK-203ENST00000368207 LAMB3Q13751 1172 aa12.71□□□□□ -0.37
PTPRK-203ENST00000368207 HIC1Q14526 733 aa12.71□□□□□ -0.37
PTPRK-203ENST00000368207 CNGA2Q16280 664 aa12.71□□□□□ -0.37
PTPRK-203ENST00000368207 LPPQ93052 612 aa12.71□□□□□ -0.37
PTPRK-203ENST00000368207 WNK4Q96J92 1243 aa12.71□□□□□ -0.37
PTPRK-203ENST00000368207 GPR20Q99678 358 aa12.71□□□□□ -0.37
PTPRK-203ENST00000368207 FICDQ9BVA6 458 aa12.71□□□□□ -0.37
PTPRK-203ENST00000368207 DMAP1Q9NPF5 467 aaPredicted RBP12.71□□□□□ -0.37
PTPRK-203ENST00000368207 AAASQ9NRG9 546 aa12.71□□□□□ -0.37
PTPRK-203ENST00000368207 AAR2Q9Y312 384 aaKnown RBP12.71□□□□□ -0.37
PTPRK-203ENST00000368207 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.71□□□□□ -0.37
PTPRK-203ENST00000368207 RNF103-CHMP3A0A140T963 221 aa12.71□□□□□ -0.38
PTPRK-203ENST00000368207 RIPK2O43353 540 aa12.71□□□□□ -0.38
PTPRK-203ENST00000368207 ZNF862O60290 1169 aa12.71□□□□□ -0.38
PTPRK-203ENST00000368207 PDHA1P08559 390 aa12.71□□□□□ -0.38
PTPRK-203ENST00000368207 ATXN3P54252 364 aaPredicted RBP12.71□□□□□ -0.38
PTPRK-203ENST00000368207 C6orf10Q5SRN2 563 aa12.71□□□□□ -0.38
PTPRK-203ENST00000368207 LRRC8EQ6NSJ5 796 aa12.71□□□□□ -0.38
PTPRK-203ENST00000368207 KCNT2Q6UVM3 1135 aa12.71□□□□□ -0.38
PTPRK-203ENST00000368207 N4BP2L2Q92802 583 aaPredicted RBP12.71□□□□□ -0.38
PTPRK-203ENST00000368207 TMA16Q96EY4 203 aaKnown RBP12.71□□□□□ -0.38
PTPRK-203ENST00000368207 SHOC2Q9UQ13 582 aa12.71□□□□□ -0.38
PTPRK-203ENST00000368207 PKP3Q9Y446 797 aa12.71□□□□□ -0.38
PTPRK-203ENST00000368207 PCDHB5Q9Y5E4 795 aa12.71□□□□□ -0.38
PTPRK-203ENST00000368207 CES2O00748 559 aa12.7□□□□□ -0.38
PTPRK-203ENST00000368207 RGMBQ6NW40 437 aa12.7□□□□□ -0.38
PTPRK-203ENST00000368207 PPP2R3CQ969Q6 453 aa12.7□□□□□ -0.38
PTPRK-203ENST00000368207 NAT9Q9BTE0 207 aa12.7□□□□□ -0.38
PTPRK-203ENST00000368207 APOL5Q9BWW9 433 aa12.7□□□□□ -0.38
PTPRK-203ENST00000368207 RNF208Q9H0X6 261 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms