RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 EFHC1Q5JVL4 640 aa9.94□□□□□ -0.82
VTA1-201ENST00000367621 COL13A1Q5TAT6 717 aaPredicted RBP9.94□□□□□ -0.82
VTA1-201ENST00000367621 VSTM1Q6UX27 236 aa9.94□□□□□ -0.82
VTA1-201ENST00000367621 RNF19BQ6ZMZ0 732 aa9.94□□□□□ -0.82
VTA1-201ENST00000367621 RHOT1Q8IXI2 618 aa9.94□□□□□ -0.82
VTA1-201ENST00000367621 KATNAL2Q8IYT4 538 aa9.94□□□□□ -0.82
VTA1-201ENST00000367621 UBL4BQ8N7F7 174 aa9.94□□□□□ -0.82
VTA1-201ENST00000367621 SPATA4Q8NEY3 305 aa9.94□□□□□ -0.82
VTA1-201ENST00000367621 SCAMP5Q8TAC9 235 aa9.94□□□□□ -0.82
VTA1-201ENST00000367621 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.94□□□□□ -0.82
VTA1-201ENST00000367621 PHOSPHO2Q8TCD6 241 aa9.94□□□□□ -0.82
VTA1-201ENST00000367621 RIN2Q8WYP3 895 aaPredicted RBP9.94□□□□□ -0.82
VTA1-201ENST00000367621 ABHD8Q96I13 439 aa9.94□□□□□ -0.82
VTA1-201ENST00000367621 RNPC3Q96LT9 517 aaKnown RBP9.94□□□□□ -0.82
VTA1-201ENST00000367621 PEBP4Q96S96 227 aa9.94□□□□□ -0.82
VTA1-201ENST00000367621 HTATIP2Q9BUP3 242 aa9.94□□□□□ -0.82
VTA1-201ENST00000367621 OXCT2Q9BYC2 517 aaPredicted RBP9.94□□□□□ -0.82
VTA1-201ENST00000367621 LRRC4Q9HBW1 653 aa9.94□□□□□ -0.82
VTA1-201ENST00000367621 CNGB3Q9NQW8 809 aa9.94□□□□□ -0.82
VTA1-201ENST00000367621 ABI2Q9NYB9 513 aaPredicted RBP9.94□□□□□ -0.82
VTA1-201ENST00000367621 PCDHB5Q9Y5E4 795 aa9.94□□□□□ -0.82
VTA1-201ENST00000367621 ALPK3Q96L96 1907 aa9.94□□□□□ -0.82
VTA1-201ENST00000367621 FNDC1Q4ZHG4 1894 aaPredicted RBP9.93□□□□□ -0.82
VTA1-201ENST00000367621 UQCRHLA0A096LP55 91 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 TCRBV7S2A1N4TA0A589 114 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 WDR27A2RRH5 827 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 CTAGE15A4D2H0 777 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 EFCAB8A8MWE9 144 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 HSF2BPO75031 334 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 SOAT2O75908 522 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 ENDOD1O94919 500 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 ABLIM3O94929 683 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 ARHGEF15O94989 841 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 TRUB2O95900 331 aaKnown RBP9.93□□□□□ -0.82
VTA1-201ENST00000367621 UQCRHP07919 91 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 GLI1P08151 1106 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 USP17L7P0C7H9 530 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 CTAGE8P0CG41 777 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 HAPLN1P10915 354 aaPredicted RBP9.93□□□□□ -0.82
VTA1-201ENST00000367621 MIPP30301 263 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 PCK1P35558 622 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 ARSEP51690 589 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 HDAC4P56524 1084 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 YWHAZP63104 245 aaKnown RBP9.93□□□□□ -0.82
VTA1-201ENST00000367621 ROR1Q01973 937 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 CKAP4Q07065 602 aaKnown RBP9.93□□□□□ -0.82
VTA1-201ENST00000367621 SMARCB1Q12824 385 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 SIX1Q15475 284 aaPredicted RBP9.93□□□□□ -0.82
VTA1-201ENST00000367621 PSMD5Q16401 504 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 TAZQ16635 292 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 DDR2Q16832 855 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 MSS51Q4VC12 460 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 SDHAF4Q5VUM1 108 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 SYPL2Q5VXT5 272 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 SCD5Q86SK9 330 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 CTAGE6Q86UF2 777 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 CTAGE4Q8IX94 777 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 DEFB106AQ8N104 65 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 SIX6OS1Q8N1H7 587 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 MMGT1Q8N4V1 131 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 FIBCD1Q8N539 461 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 IRGQQ8WZA9 623 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 RAPGEF5Q92565 580 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 CFAP57Q96MR6 1250 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 PGLYRP2Q96PD5 576 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 RAD9AQ99638 391 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 RBM12Q9NTZ6 932 aaKnown RBP9.93□□□□□ -0.82
VTA1-201ENST00000367621 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.93□□□□□ -0.82
VTA1-201ENST00000367621 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.93□□□□□ -0.82
VTA1-201ENST00000367621 INSL6Q9Y581 213 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 CDY1Q9Y6F8 540 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 SLC4A7Q9Y6M7 1214 aa9.93□□□□□ -0.82
VTA1-201ENST00000367621 V9GYY5 206 aaPredicted RBP9.93□□□□□ -0.82
VTA1-201ENST00000367621 TDRD15B5MCY1 1934 aaKnown RBP9.93□□□□□ -0.82
VTA1-201ENST00000367621 FAM92AA1XBS5 289 aa9.92□□□□□ -0.82
VTA1-201ENST00000367621 PGRMC1O00264 195 aaKnown RBP9.92□□□□□ -0.82
VTA1-201ENST00000367621 FSCN2O14926 492 aa9.92□□□□□ -0.82
VTA1-201ENST00000367621 FGF18O76093 207 aa9.92□□□□□ -0.82
VTA1-201ENST00000367621 FGGP02679 453 aa9.92□□□□□ -0.82
VTA1-201ENST00000367621 ATP2A2P16615 1042 aaKnown RBP9.92□□□□□ -0.82
VTA1-201ENST00000367621 OR1D2P34982 312 aa9.92□□□□□ -0.82
VTA1-201ENST00000367621 GRIK1P39086 918 aa9.92□□□□□ -0.82
VTA1-201ENST00000367621 MATKP42679 507 aa9.92□□□□□ -0.82
VTA1-201ENST00000367621 GLUD2P49448 558 aa9.92□□□□□ -0.82
VTA1-201ENST00000367621 SLC5A3P53794 718 aa9.92□□□□□ -0.82
VTA1-201ENST00000367621 ATXN1P54253 815 aaKnown RBP9.92□□□□□ -0.82
VTA1-201ENST00000367621 ARPP19P56211 112 aa9.92□□□□□ -0.82
VTA1-201ENST00000367621 USP46P62068 366 aa9.92□□□□□ -0.82
VTA1-201ENST00000367621 ATP11AP98196 1134 aa9.92□□□□□ -0.82
VTA1-201ENST00000367621 INSM1Q01101 510 aaPredicted RBP9.92□□□□□ -0.82
VTA1-201ENST00000367621 ADCY2Q08462 1091 aa9.92□□□□□ -0.82
VTA1-201ENST00000367621 C2orf54Q08AI8 447 aa9.92□□□□□ -0.82
VTA1-201ENST00000367621 DUSP4Q13115 394 aa9.92□□□□□ -0.82
VTA1-201ENST00000367621 ERCC6LQ2NKX8 1250 aa9.92□□□□□ -0.82
VTA1-201ENST00000367621 C9orf50Q5SZB4 431 aa9.92□□□□□ -0.82
VTA1-201ENST00000367621 SPOUT1Q5T280 376 aaKnown RBP9.92□□□□□ -0.82
VTA1-201ENST00000367621 MFSD7Q6UXD7 560 aa9.92□□□□□ -0.82
VTA1-201ENST00000367621 POLNQ7Z5Q5 900 aa9.92□□□□□ -0.82
VTA1-201ENST00000367621 SPRED2Q7Z698 418 aa9.92□□□□□ -0.82
VTA1-201ENST00000367621 SLC13A5Q86YT5 568 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms