RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 MDGA1Q8NFP4 955 aa15.65■□□□□ 0.1
CTSD-202ENST00000367196 TAS1R2Q8TE23 839 aa15.65■□□□□ 0.1
CTSD-202ENST00000367196 ELMO3Q96BJ8 720 aa15.65■□□□□ 0.1
CTSD-202ENST00000367196 XPO6Q96QU8 1125 aaKnown RBP15.65■□□□□ 0.1
CTSD-202ENST00000367196 GTPBP4Q9BZE4 634 aaKnown RBP15.65■□□□□ 0.1
CTSD-202ENST00000367196 TPSD1Q9BZJ3 242 aa15.65■□□□□ 0.1
CTSD-202ENST00000367196 MAPK8IP1Q9UQF2 711 aa15.65■□□□□ 0.1
CTSD-202ENST00000367196 ZDHHC9Q9Y397 364 aa15.65■□□□□ 0.1
CTSD-202ENST00000367196 CNOT1A5YKK6 2376 aaKnown RBP15.64■□□□□ 0.09
CTSD-202ENST00000367196 BCLAF3A2AJT9 711 aaKnown RBP15.64■□□□□ 0.09
CTSD-202ENST00000367196 GOLGA6L4A6NEF3 574 aa15.64■□□□□ 0.09
CTSD-202ENST00000367196 DCLK1O15075 740 aa15.64■□□□□ 0.09
CTSD-202ENST00000367196 CETN3O15182 167 aa15.64■□□□□ 0.09
CTSD-202ENST00000367196 ZBTB24O43167 697 aaPredicted RBP15.64■□□□□ 0.09
CTSD-202ENST00000367196 TULP3O75386 442 aa15.64■□□□□ 0.09
CTSD-202ENST00000367196 RALAP11233 206 aa15.64■□□□□ 0.09
CTSD-202ENST00000367196 CD58P19256 250 aa15.64■□□□□ 0.09
CTSD-202ENST00000367196 ACO1P21399 889 aaKnown RBP15.64■□□□□ 0.09
CTSD-202ENST00000367196 KIR2DL1P43626 348 aaPredicted RBP15.64■□□□□ 0.09
CTSD-202ENST00000367196 MXI1P50539 228 aa15.64■□□□□ 0.09
CTSD-202ENST00000367196 PPP3CAQ08209 521 aa15.64■□□□□ 0.09
CTSD-202ENST00000367196 RNF43Q68DV7 783 aa15.64■□□□□ 0.09
CTSD-202ENST00000367196 CYP2U1Q7Z449 544 aa15.64■□□□□ 0.09
CTSD-202ENST00000367196 C12orf40Q86WS4 652 aa15.64■□□□□ 0.09
CTSD-202ENST00000367196 ETFBKMTQ8IXQ9 262 aa15.64■□□□□ 0.09
CTSD-202ENST00000367196 TERB1Q8NA31 727 aa15.64■□□□□ 0.09
CTSD-202ENST00000367196 FBXL13Q8NEE6 735 aa15.64■□□□□ 0.09
CTSD-202ENST00000367196 NUP205Q92621 2012 aa15.64■□□□□ 0.09
CTSD-202ENST00000367196 TSG101Q99816 390 aa15.64■□□□□ 0.09
CTSD-202ENST00000367196 APOBEC3GQ9HC16 384 aaKnown RBP15.64■□□□□ 0.09
CTSD-202ENST00000367196 WDR35Q9P2L0 1181 aa15.64■□□□□ 0.09
CTSD-202ENST00000367196 GTF3C3Q9Y5Q9 886 aa15.64■□□□□ 0.09
CTSD-202ENST00000367196 TPRP12270 2363 aaKnown RBP15.64■□□□□ 0.09
CTSD-202ENST00000367196 THADAQ6YHU6 1953 aa15.64■□□□□ 0.09
CTSD-202ENST00000367196 CYP26A1O43174 497 aa15.63■□□□□ 0.09
CTSD-202ENST00000367196 KCNA4P22459 653 aa15.63■□□□□ 0.09
CTSD-202ENST00000367196 ZCWPW2Q504Y3 356 aa15.63■□□□□ 0.09
CTSD-202ENST00000367196 C10orf76Q5T2E6 689 aa15.63■□□□□ 0.09
CTSD-202ENST00000367196 STPG1Q5TH74 334 aa15.63■□□□□ 0.09
CTSD-202ENST00000367196 GRAMD4Q6IC98 578 aa15.63■□□□□ 0.09
CTSD-202ENST00000367196 SDE2Q6IQ49 451 aa15.63■□□□□ 0.09
CTSD-202ENST00000367196 LPCAT2Q7L5N7 544 aa15.63■□□□□ 0.09
CTSD-202ENST00000367196 CCDC186Q7Z3E2 898 aa15.63■□□□□ 0.09
CTSD-202ENST00000367196 ARHGAP18Q8N392 663 aa15.63■□□□□ 0.09
CTSD-202ENST00000367196 ZNF513Q8N8E2 541 aaPredicted RBP15.63■□□□□ 0.09
CTSD-202ENST00000367196 JAKMIP2Q96AA8 810 aa15.63■□□□□ 0.09
CTSD-202ENST00000367196 TWNKQ96RR1 684 aa15.63■□□□□ 0.09
CTSD-202ENST00000367196 EDEM2Q9BV94 578 aa15.63■□□□□ 0.09
CTSD-202ENST00000367196 BBS2Q9BXC9 721 aa15.63■□□□□ 0.09
CTSD-202ENST00000367196 KLF16Q9BXK1 252 aaPredicted RBP15.63■□□□□ 0.09
CTSD-202ENST00000367196 DUSP16Q9BY84 665 aa15.63■□□□□ 0.09
CTSD-202ENST00000367196 HOOK1Q9UJC3 728 aaKnown RBP15.63■□□□□ 0.09
CTSD-202ENST00000367196 DNMT3LQ9UJW3 386 aa15.63■□□□□ 0.09
CTSD-202ENST00000367196 NAGPAQ9UK23 515 aa15.63■□□□□ 0.09
CTSD-202ENST00000367196 CIZ1Q9ULV3 898 aaPredicted RBP15.63■□□□□ 0.09
CTSD-202ENST00000367196 ZNF510Q9Y2H8 683 aa15.63■□□□□ 0.09
CTSD-202ENST00000367196 TCRBV21S2A2A0A5A6 115 aa15.62■□□□□ 0.09
CTSD-202ENST00000367196 HHLA1C9JL84 531 aa15.62■□□□□ 0.09
CTSD-202ENST00000367196 NEDD8-MDP1E9PL57 170 aa15.62■□□□□ 0.09
CTSD-202ENST00000367196 SGK1O00141 431 aa15.62■□□□□ 0.09
CTSD-202ENST00000367196 KHNYNO15037 678 aaKnown RBP15.62■□□□□ 0.09
CTSD-202ENST00000367196 SLC16A3O15427 465 aaKnown RBP15.62■□□□□ 0.09
CTSD-202ENST00000367196 MAP3K13O43283 966 aa15.62■□□□□ 0.09
CTSD-202ENST00000367196 SMC2O95347 1197 aa15.62■□□□□ 0.09
CTSD-202ENST00000367196 PLA2G4AP47712 749 aa15.62■□□□□ 0.09
CTSD-202ENST00000367196 KIF11P52732 1056 aa15.62■□□□□ 0.09
CTSD-202ENST00000367196 SPDYCQ5MJ68 293 aa15.62■□□□□ 0.09
CTSD-202ENST00000367196 C10orf120Q5SQS8 335 aa15.62■□□□□ 0.09
CTSD-202ENST00000367196 DAB2IPQ5VWQ8 1189 aa15.62■□□□□ 0.09
CTSD-202ENST00000367196 TMEM92Q6UXU6 159 aa15.62■□□□□ 0.09
CTSD-202ENST00000367196 GPRIN1Q7Z2K8 1008 aa15.62■□□□□ 0.09
CTSD-202ENST00000367196 TMEM25Q86YD3 366 aa15.62■□□□□ 0.09
CTSD-202ENST00000367196 PGBD3Q8N328 593 aa15.62■□□□□ 0.09
CTSD-202ENST00000367196 PHTF2Q8N3S3 785 aa15.62■□□□□ 0.09
CTSD-202ENST00000367196 ZNF276Q8N554 614 aa15.62■□□□□ 0.09
CTSD-202ENST00000367196 NAT16Q8N8M0 369 aa15.62■□□□□ 0.09
CTSD-202ENST00000367196 OLIG1Q8TAK6 271 aa15.62■□□□□ 0.09
CTSD-202ENST00000367196 HEXIM2Q96MH2 286 aaKnown RBP15.62■□□□□ 0.09
CTSD-202ENST00000367196 GOLPH3LQ9H4A5 285 aa15.62■□□□□ 0.09
CTSD-202ENST00000367196 DNAJC17Q9NVM6 304 aaKnown RBP15.62■□□□□ 0.09
CTSD-202ENST00000367196 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.62■□□□□ 0.09
CTSD-202ENST00000367196 RAB20Q9NX57 234 aa15.62■□□□□ 0.09
CTSD-202ENST00000367196 CLIC5Q9NZA1 410 aa15.62■□□□□ 0.09
CTSD-202ENST00000367196 MARK1Q9P0L2 795 aa15.62■□□□□ 0.09
CTSD-202ENST00000367196 STARD13Q9Y3M8 1113 aa15.62■□□□□ 0.09
CTSD-202ENST00000367196 PLXND1Q9Y4D7 1925 aa15.62■□□□□ 0.09
CTSD-202ENST00000367196 ACACBO00763 2458 aa15.61■□□□□ 0.09
CTSD-202ENST00000367196 MYO18AQ92614 2054 aaKnown RBP15.61■□□□□ 0.09
CTSD-202ENST00000367196 A0A1W2PQH9 124 aa15.61■□□□□ 0.09
CTSD-202ENST00000367196 CACNG3O60359 315 aa15.61■□□□□ 0.09
CTSD-202ENST00000367196 RARGP13631 454 aa15.61■□□□□ 0.09
CTSD-202ENST00000367196 P2RY2P41231 377 aa15.61■□□□□ 0.09
CTSD-202ENST00000367196 MCCD1P59942 119 aaPredicted RBP15.61■□□□□ 0.09
CTSD-202ENST00000367196 YWHAEP62258 255 aaKnown RBP15.61■□□□□ 0.09
CTSD-202ENST00000367196 COBLL1Q53SF7 1204 aa15.61■□□□□ 0.09
CTSD-202ENST00000367196 PPP1R26Q5T8A7 1209 aaPredicted RBP15.61■□□□□ 0.09
CTSD-202ENST00000367196 HMGB4Q8WW32 186 aa15.61■□□□□ 0.09
CTSD-202ENST00000367196 CHAMP1Q96JM3 812 aa15.61■□□□□ 0.09
CTSD-202ENST00000367196 GSDMAQ96QA5 445 aa15.61■□□□□ 0.09
CTSD-202ENST00000367196 SMOC1Q9H4F8 434 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms