RNA–Protein interactions for RNA: ENST00000367041.5

CD46-207, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,281 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-207ENST00000367041 PPP1R1BQ9UD71 204 aaPredicted RBP8.09□□□□□ -1.11
CD46-207ENST00000367041 VPS28Q9UK41 221 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 FADS3Q9Y5Q0 445 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 IVNS1ABPQ9Y6Y0 642 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 PRSS51A0A1B0GVH4 220 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 TMEM191CA6NGB0 347 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 CCDC160A6NGH7 325 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 K7ENM7 598 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 SGK1O00141 431 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 FBP2O00757 339 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 ZC3H11AO75152 810 aaKnown RBP eCLIP8.09□□□□□ -1.112e-9■■■■■ 26.8
CD46-207ENST00000367041 SPAG6O75602 509 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 TMEM191BP0C7N4 346 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 PRKCHP24723 683 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 CRHR1P34998 444 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 SERPINB6P35237 376 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 ELK3P41970 407 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 NSFP46459 744 aaKnown RBP8.09□□□□□ -1.11
CD46-207ENST00000367041 NUMBP49757 651 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 PRELPP51888 382 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 EPHB1P54762 984 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 CCDC92Q53HC0 331 aaPredicted RBP8.09□□□□□ -1.11
CD46-207ENST00000367041 TCHHL1Q5QJ38 904 aaPredicted RBP8.09□□□□□ -1.11
CD46-207ENST00000367041 TEDDM1Q5T9Z0 273 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 KAZNQ674X7 775 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 MBLAC2Q68D91 279 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 TXNRD3NBQ6F5E7 133 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 AMIGO2Q86SJ2 522 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 SLC51AQ86UW1 340 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 CBWD2Q8IUF1 395 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 FEZF2Q8TBJ5 459 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 C17orf50Q8WW18 174 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 HSPH1Q92598 858 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 CNBD2Q96M20 576 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 PPP1R10Q96QC0 940 aaKnown RBP8.09□□□□□ -1.11
CD46-207ENST00000367041 MPHOSPH6Q99547 160 aaKnown RBP8.09□□□□□ -1.11
CD46-207ENST00000367041 SENP7Q9BQF6 1050 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.09□□□□□ -1.111e-8■■■■■ 43.5
CD46-207ENST00000367041 GINM1Q9NU53 330 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 RRN3Q9NYV6 651 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 MARCOQ9UEW3 520 aaPredicted RBP8.09□□□□□ -1.11
CD46-207ENST00000367041 STK39Q9UEW8 545 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 ZNF711Q9Y462 761 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.09□□□□□ -1.11
CD46-207ENST00000367041 TRIM49D1C9J1S8 452 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 KBTBD13C9JR72 458 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 C6orf229H3BNL8 230 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 GPR25O00155 361 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 ADCY3O60266 1144 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 KITP10721 976 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 ZNF26P17031 533 aaPredicted RBP8.09□□□□□ -1.11
CD46-207ENST00000367041 ACO1P21399 889 aaKnown RBP8.09□□□□□ -1.11
CD46-207ENST00000367041 GABRB3P28472 473 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 NAA20P61599 178 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 PSMC5P62195 406 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 TUBA4AP68366 448 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 CTBSQ01459 385 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 C1QBPQ07021 282 aaKnown RBP8.09□□□□□ -1.11
CD46-207ENST00000367041 PDAP1Q13442 181 aaKnown RBP8.09□□□□□ -1.11
CD46-207ENST00000367041 PSMD6Q15008 389 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 ZYXQ15942 572 aaKnown RBP8.09□□□□□ -1.11
CD46-207ENST00000367041 SNRNP35Q16560 246 aaKnown RBP8.09□□□□□ -1.11
CD46-207ENST00000367041 ZNF423Q2M1K9 1284 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 ANKDD1AQ495B1 522 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 C6orf52Q5T4I8 152 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 RWDD4Q6NW29 188 aaKnown RBP8.09□□□□□ -1.11
CD46-207ENST00000367041 IYDQ6PHW0 289 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 NUDCD3Q8IVD9 361 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 DEFB107AQ8IZN7 70 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 TMEM102Q8N9M5 508 aaPredicted RBP8.09□□□□□ -1.11
CD46-207ENST00000367041 DEPTORQ8TB45 409 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 PIWIL2Q8TC59 973 aaKnown RBP8.09□□□□□ -1.11
CD46-207ENST00000367041 ADAMTS16Q8TE57 1224 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 GIPC3Q8TF64 312 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 TUT1Q9H6E5 874 aaKnown RBP8.09□□□□□ -1.11
CD46-207ENST00000367041 XAB2Q9HCS7 855 aaKnown RBP8.09□□□□□ -1.11
CD46-207ENST00000367041 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.09□□□□□ -1.11
CD46-207ENST00000367041 IP6K2Q9UHH9 426 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 XPO7Q9UIA9 1087 aaKnown RBP8.09□□□□□ -1.11
CD46-207ENST00000367041 FAM32AQ9Y421 112 aaKnown RBP8.09□□□□□ -1.11
CD46-207ENST00000367041 SCINQ9Y6U3 715 aa8.09□□□□□ -1.11
CD46-207ENST00000367041 SPDYE2BA6NHP3 402 aa8.08□□□□□ -1.12
CD46-207ENST00000367041 TLR3O15455 904 aaKnown RBP8.08□□□□□ -1.12
CD46-207ENST00000367041 KRT1P04264 644 aa8.08□□□□□ -1.12
CD46-207ENST00000367041 SERPINB2P05120 415 aa8.08□□□□□ -1.12
CD46-207ENST00000367041 INHBAP08476 426 aa8.08□□□□□ -1.12
CD46-207ENST00000367041 SNRPAP09012 282 aaKnown RBP8.08□□□□□ -1.12
CD46-207ENST00000367041 SPDYE6P0CI01 402 aa8.08□□□□□ -1.12
CD46-207ENST00000367041 IDH3AP50213 366 aa8.08□□□□□ -1.12
CD46-207ENST00000367041 SPDYE2Q495Y8 402 aa8.08□□□□□ -1.12
CD46-207ENST00000367041 ISLR2Q6UXK2 745 aa8.08□□□□□ -1.12
CD46-207ENST00000367041 DCDC5Q6ZRR9 648 aa8.08□□□□□ -1.12
CD46-207ENST00000367041 CCDC80Q76M96 950 aa8.08□□□□□ -1.12
CD46-207ENST00000367041 CARM1Q86X55 608 aa8.08□□□□□ -1.12
CD46-207ENST00000367041 PDIK1LQ8N165 341 aa8.08□□□□□ -1.12
CD46-207ENST00000367041 DCAF4Q8WV16 495 aa8.08□□□□□ -1.12
CD46-207ENST00000367041 POMGNT1Q8WZA1 660 aa8.08□□□□□ -1.12
CD46-207ENST00000367041 ARHGEF1Q92888 912 aaKnown RBP8.08□□□□□ -1.12
CD46-207ENST00000367041 RILPQ96NA2 401 aa8.08□□□□□ -1.12
CD46-207ENST00000367041 LIN28AQ9H9Z2 209 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms