RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 FANCMQ8IYD8 2048 aa8.33□□□□□ -1.08
H3F3A-201ENST00000366813 NBEAQ8NFP9 2946 aa8.33□□□□□ -1.08
H3F3A-201ENST00000366813 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.32□□□□□ -1.08
H3F3A-201ENST00000366813 NPIPB8E9PQR5 432 aa8.32□□□□□ -1.08
H3F3A-201ENST00000366813 MAFO75444 373 aaPredicted RBP8.32□□□□□ -1.08
H3F3A-201ENST00000366813 RPS19P39019 145 aaKnown RBP8.32□□□□□ -1.08
H3F3A-201ENST00000366813 SHC2P98077 582 aa8.32□□□□□ -1.08
H3F3A-201ENST00000366813 CD83Q01151 205 aa8.32□□□□□ -1.08
H3F3A-201ENST00000366813 KCNC3Q14003 757 aa8.32□□□□□ -1.08
H3F3A-201ENST00000366813 BAATQ14032 418 aaPredicted RBP8.32□□□□□ -1.08
H3F3A-201ENST00000366813 KIAA0753Q2KHM9 967 aa8.32□□□□□ -1.08
H3F3A-201ENST00000366813 TMEM184AQ6ZMB5 413 aa8.32□□□□□ -1.08
H3F3A-201ENST00000366813 RNF207Q6ZRF8 634 aa8.32□□□□□ -1.08
H3F3A-201ENST00000366813 LARP4Q71RC2 724 aaKnown RBP eCLIP8.32□□□□□ -1.08
H3F3A-201ENST00000366813 CHST3Q7LGC8 479 aa8.32□□□□□ -1.08
H3F3A-201ENST00000366813 C1orf210Q8IVY1 113 aa8.32□□□□□ -1.08
H3F3A-201ENST00000366813 MAML2Q8IZL2 1156 aaPredicted RBP8.32□□□□□ -1.08
H3F3A-201ENST00000366813 TDRD5Q8NAT2 981 aaKnown RBP8.32□□□□□ -1.08
H3F3A-201ENST00000366813 SCFD2Q8WU76 684 aa8.32□□□□□ -1.08
H3F3A-201ENST00000366813 EXTL1Q92935 676 aa8.32□□□□□ -1.08
H3F3A-201ENST00000366813 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.32□□□□□ -1.08
H3F3A-201ENST00000366813 DSPP15924 2871 aaKnown RBP8.32□□□□□ -1.08
H3F3A-201ENST00000366813 PTPRCP08575 1304 aa8.32□□□□□ -1.08
H3F3A-201ENST00000366813 PRSS38A1L453 326 aa8.31□□□□□ -1.08
H3F3A-201ENST00000366813 PRKAB2O43741 272 aa8.31□□□□□ -1.08
H3F3A-201ENST00000366813 NARSO43776 548 aaKnown RBP8.31□□□□□ -1.08
H3F3A-201ENST00000366813 HMGB1P09429 215 aaKnown RBP8.31□□□□□ -1.08
H3F3A-201ENST00000366813 CLEC2LP0C7M8 214 aa8.31□□□□□ -1.08
H3F3A-201ENST00000366813 CASTP20810 708 aaKnown RBP8.31□□□□□ -1.08
H3F3A-201ENST00000366813 GPR3P46089 330 aa8.31□□□□□ -1.08
H3F3A-201ENST00000366813 BCAR1P56945 870 aa8.31□□□□□ -1.08
H3F3A-201ENST00000366813 NFYCQ13952 458 aa8.31□□□□□ -1.08
H3F3A-201ENST00000366813 EIF4HQ15056 248 aaKnown RBP8.31□□□□□ -1.08
H3F3A-201ENST00000366813 SERINC5Q86VE9 423 aa8.31□□□□□ -1.08
H3F3A-201ENST00000366813 LURAP1LQ8IV03 231 aa8.31□□□□□ -1.08
H3F3A-201ENST00000366813 LCORLQ8N3X6 602 aa8.31□□□□□ -1.08
H3F3A-201ENST00000366813 SECISBP2LQ93073 1101 aaKnown RBP8.31□□□□□ -1.08
H3F3A-201ENST00000366813 SMAD5Q99717 465 aaKnown RBP8.31□□□□□ -1.08
H3F3A-201ENST00000366813 PCED1AQ9H1Q7 454 aa8.31□□□□□ -1.08
H3F3A-201ENST00000366813 CLIP2Q9UDT6 1046 aa8.31□□□□□ -1.08
H3F3A-201ENST00000366813 ADD3Q9UEY8 706 aaKnown RBP8.31□□□□□ -1.08
H3F3A-201ENST00000366813 ISY1Q9ULR0 285 aaKnown RBP8.31□□□□□ -1.08
H3F3A-201ENST00000366813 LOC400499M0QZD8 3231 aa8.3□□□□□ -1.08
H3F3A-201ENST00000366813 A0A0G2JNJ9 132 aa8.3□□□□□ -1.08
H3F3A-201ENST00000366813 SRRM3A6NNA2 597 aaPredicted RBP8.3□□□□□ -1.08
H3F3A-201ENST00000366813 TMEM232C9JQI7 657 aa8.3□□□□□ -1.08
H3F3A-201ENST00000366813 TAF4O00268 1085 aa8.3□□□□□ -1.08
H3F3A-201ENST00000366813 ZNF286BP0CG31 522 aa8.3□□□□□ -1.08
H3F3A-201ENST00000366813 SRGAP2BP0DMP2 458 aa8.3□□□□□ -1.08
H3F3A-201ENST00000366813 HOXB8P17481 243 aaPredicted RBP8.3□□□□□ -1.08
H3F3A-201ENST00000366813 ENPP1P22413 925 aa8.3□□□□□ -1.08
H3F3A-201ENST00000366813 TDGQ13569 410 aa8.3□□□□□ -1.08
H3F3A-201ENST00000366813 PCOLCEQ15113 449 aa8.3□□□□□ -1.08
H3F3A-201ENST00000366813 TBR1Q16650 682 aa8.3□□□□□ -1.08
H3F3A-201ENST00000366813 LY6KQ17RY6 165 aa8.3□□□□□ -1.08
H3F3A-201ENST00000366813 CT83Q5H943 113 aa8.3□□□□□ -1.08
H3F3A-201ENST00000366813 C12orf60Q5U649 245 aa8.3□□□□□ -1.08
H3F3A-201ENST00000366813 WDR63Q8IWG1 891 aa8.3□□□□□ -1.08
H3F3A-201ENST00000366813 CDCA3Q99618 268 aaPredicted RBP8.3□□□□□ -1.08
H3F3A-201ENST00000366813 TBC1D17Q9HA65 648 aa8.3□□□□□ -1.08
H3F3A-201ENST00000366813 DLGAP2Q9P1A6 1054 aa8.3□□□□□ -1.08
H3F3A-201ENST00000366813 NYAP2Q9P242 653 aa8.3□□□□□ -1.08
H3F3A-201ENST00000366813 Q9UFV3 132 aa8.3□□□□□ -1.08
H3F3A-201ENST00000366813 TMPRSS11EQ9UL52 423 aa8.3□□□□□ -1.08
H3F3A-201ENST00000366813 DUSP12Q9UNI6 340 aa8.3□□□□□ -1.08
H3F3A-201ENST00000366813 SPEF1Q9Y4P9 236 aa8.3□□□□□ -1.08
H3F3A-201ENST00000366813 SLC30A1Q9Y6M5 507 aa8.3□□□□□ -1.08
H3F3A-201ENST00000366813 FPGT-TNNI3KV9GXZ4 949 aa8.3□□□□□ -1.08
H3F3A-201ENST00000366813 SMG1Q96Q15 3661 aaKnown RBP8.3□□□□□ -1.08
H3F3A-201ENST00000366813 LCTP09848 1927 aa8.3□□□□□ -1.08
H3F3A-201ENST00000366813 HAS3O00219 553 aa8.29□□□□□ -1.08
H3F3A-201ENST00000366813 S100BP04271 92 aaPredicted RBP8.29□□□□□ -1.08
H3F3A-201ENST00000366813 ARHGAP1Q07960 439 aa8.29□□□□□ -1.08
H3F3A-201ENST00000366813 KLF10Q13118 480 aa8.29□□□□□ -1.08
H3F3A-201ENST00000366813 G3BP1Q13283 466 aaKnown RBP eCLIP8.29□□□□□ -1.08
H3F3A-201ENST00000366813 SOWAHCQ53LP3 525 aaPredicted RBP8.29□□□□□ -1.08
H3F3A-201ENST00000366813 PITRM1Q5JRX3 1037 aa8.29□□□□□ -1.08
H3F3A-201ENST00000366813 ODR4Q5SWX8 454 aa8.29□□□□□ -1.08
H3F3A-201ENST00000366813 CES5AQ6NT32 575 aa8.29□□□□□ -1.08
H3F3A-201ENST00000366813 CCDC62Q6P9F0 684 aa8.29□□□□□ -1.08
H3F3A-201ENST00000366813 Q6ZSN1 163 aa8.29□□□□□ -1.08
H3F3A-201ENST00000366813 C1orf162Q8NEQ5 155 aaPredicted RBP8.29□□□□□ -1.08
H3F3A-201ENST00000366813 APBB2Q92870 758 aa8.29□□□□□ -1.08
H3F3A-201ENST00000366813 ZNF503Q96F45 646 aa8.29□□□□□ -1.08
H3F3A-201ENST00000366813 NECTIN4Q96NY8 510 aa8.29□□□□□ -1.08
H3F3A-201ENST00000366813 MEIS3Q99687 375 aa8.29□□□□□ -1.08
H3F3A-201ENST00000366813 PITHD1Q9GZP4 211 aaPredicted RBP8.29□□□□□ -1.08
H3F3A-201ENST00000366813 OR10A2Q9H208 303 aa8.29□□□□□ -1.08
H3F3A-201ENST00000366813 MTG2Q9H4K7 406 aa8.29□□□□□ -1.08
H3F3A-201ENST00000366813 SLITRK6Q9H5Y7 841 aa8.29□□□□□ -1.08
H3F3A-201ENST00000366813 ARMT1Q9H993 441 aa8.29□□□□□ -1.08
H3F3A-201ENST00000366813 CA14Q9ULX7 337 aa8.29□□□□□ -1.08
H3F3A-201ENST00000366813 NUMBLQ9Y6R0 609 aa8.29□□□□□ -1.08
H3F3A-201ENST00000366813 MYH8P13535 1937 aa8.29□□□□□ -1.08
H3F3A-201ENST00000366813 H2AFYO75367 372 aaKnown RBP8.29□□□□□ -1.08
H3F3A-201ENST00000366813 MT-CO1P00395 513 aa8.29□□□□□ -1.08
H3F3A-201ENST00000366813 GH1P01241 217 aa8.29□□□□□ -1.08
H3F3A-201ENST00000366813 MYBL2P10244 700 aa8.29□□□□□ -1.08
H3F3A-201ENST00000366813 GLULP15104 373 aa8.29□□□□□ -1.08
H3F3A-201ENST00000366813 CALML3P27482 149 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms