RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 NUB1Q9Y5A7 615 aa11.9□□□□□ -0.5
CSNK1E-202ENST00000366216 DUSP10Q9Y6W6 482 aa11.9□□□□□ -0.5
CSNK1E-202ENST00000366216 NAV2Q8IVL1 2488 aa11.89□□□□□ -0.51
CSNK1E-202ENST00000366216 OBSL1O75147 1896 aa11.89□□□□□ -0.51
CSNK1E-202ENST00000366216 ANO9A1A5B4 782 aa11.89□□□□□ -0.51
CSNK1E-202ENST00000366216 ARNTLO00327 626 aa11.89□□□□□ -0.51
CSNK1E-202ENST00000366216 MOSPD3O75425 235 aa11.89□□□□□ -0.51
CSNK1E-202ENST00000366216 URI1O94763 535 aaPredicted RBP11.89□□□□□ -0.51
CSNK1E-202ENST00000366216 TOP3BO95985 862 aaKnown RBP11.89□□□□□ -0.51
CSNK1E-202ENST00000366216 GZMAP12544 262 aa11.89□□□□□ -0.51
CSNK1E-202ENST00000366216 CYP11B1P15538 503 aa11.89□□□□□ -0.51
CSNK1E-202ENST00000366216 PTPN2P17706 415 aa11.89□□□□□ -0.51
CSNK1E-202ENST00000366216 ACO1P21399 889 aaKnown RBP11.89□□□□□ -0.51
CSNK1E-202ENST00000366216 ATICP31939 592 aa11.89□□□□□ -0.51
CSNK1E-202ENST00000366216 MPLP40238 635 aa11.89□□□□□ -0.51
CSNK1E-202ENST00000366216 USP8P40818 1118 aa11.89□□□□□ -0.51
CSNK1E-202ENST00000366216 PDE6CP51160 858 aa11.89□□□□□ -0.51
CSNK1E-202ENST00000366216 MLLT6P55198 1093 aaPredicted RBP11.89□□□□□ -0.51
CSNK1E-202ENST00000366216 TUSC3Q13454 348 aa11.89□□□□□ -0.51
CSNK1E-202ENST00000366216 TMEM132DQ14C87 1099 aa11.89□□□□□ -0.51
CSNK1E-202ENST00000366216 JADE1Q6IE81 842 aa11.89□□□□□ -0.51
CSNK1E-202ENST00000366216 SPOPLQ6IQ16 392 aa11.89□□□□□ -0.51
CSNK1E-202ENST00000366216 C1orf228Q6PIY5 440 aa11.89□□□□□ -0.51
CSNK1E-202ENST00000366216 Q6ZS52 159 aa11.89□□□□□ -0.51
CSNK1E-202ENST00000366216 KBTBD6Q86V97 674 aa11.89□□□□□ -0.51
CSNK1E-202ENST00000366216 UBR7Q8N806 425 aa11.89□□□□□ -0.51
CSNK1E-202ENST00000366216 GAB3Q8WWW8 586 aa11.89□□□□□ -0.51
CSNK1E-202ENST00000366216 RSPRY1Q96DX4 576 aa11.89□□□□□ -0.51
CSNK1E-202ENST00000366216 ASB16Q96NS5 453 aa11.89□□□□□ -0.51
CSNK1E-202ENST00000366216 NOX5Q96PH1 765 aa11.89□□□□□ -0.51
CSNK1E-202ENST00000366216 ALS2CR12Q96Q35 445 aa11.89□□□□□ -0.51
CSNK1E-202ENST00000366216 SCNM1Q9BWG6 230 aa11.89□□□□□ -0.51
CSNK1E-202ENST00000366216 NIF3L1Q9GZT8 377 aa11.89□□□□□ -0.51
CSNK1E-202ENST00000366216 VRTNQ9H8Y1 702 aa11.89□□□□□ -0.51
CSNK1E-202ENST00000366216 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.89□□□□□ -0.511e-6■■■■■ 51
CSNK1E-202ENST00000366216 PCDHGA5Q9Y5G8 931 aa11.89□□□□□ -0.51
CSNK1E-202ENST00000366216 ACACAQ13085 2346 aa11.89□□□□□ -0.51
CSNK1E-202ENST00000366216 MYH10P35580 1976 aa11.88□□□□□ -0.51
CSNK1E-202ENST00000366216 MACROD2A1Z1Q3 448 aa11.88□□□□□ -0.51
CSNK1E-202ENST00000366216 RPP40O75818 363 aaKnown RBP11.88□□□□□ -0.51
CSNK1E-202ENST00000366216 STAU1O95793 577 aaKnown RBP11.88□□□□□ -0.51
CSNK1E-202ENST00000366216 NFICP08651 508 aa11.88□□□□□ -0.51
CSNK1E-202ENST00000366216 TMEM253P0C7T8 217 aa11.88□□□□□ -0.51
CSNK1E-202ENST00000366216 KRT5P13647 590 aa11.88□□□□□ -0.51
CSNK1E-202ENST00000366216 CHRNB2P17787 502 aa11.88□□□□□ -0.51
CSNK1E-202ENST00000366216 YARSP54577 528 aaKnown RBP11.88□□□□□ -0.51
CSNK1E-202ENST00000366216 MYL6P60660 151 aa11.88□□□□□ -0.51
CSNK1E-202ENST00000366216 YWHAEP62258 255 aaKnown RBP11.88□□□□□ -0.51
CSNK1E-202ENST00000366216 CDR2Q01850 454 aa11.88□□□□□ -0.51
CSNK1E-202ENST00000366216 ELAVL2Q12926 359 aaKnown RBP11.88□□□□□ -0.51
CSNK1E-202ENST00000366216 IFI16Q16666 785 aaKnown RBP11.88□□□□□ -0.51
CSNK1E-202ENST00000366216 ZNF699Q32M78 642 aa11.88□□□□□ -0.51
CSNK1E-202ENST00000366216 DGKKQ5KSL6 1271 aa11.88□□□□□ -0.51
CSNK1E-202ENST00000366216 SH3PXD2AQ5TCZ1 1133 aa11.88□□□□□ -0.51
CSNK1E-202ENST00000366216 PAPD7Q5XG87 772 aaKnown RBP11.88□□□□□ -0.51
CSNK1E-202ENST00000366216 ALKAL1Q6UXT8 129 aa11.88□□□□□ -0.51
CSNK1E-202ENST00000366216 NOP9Q86U38 636 aaKnown RBP11.88□□□□□ -0.51
CSNK1E-202ENST00000366216 SLC47A2Q86VL8 602 aa11.88□□□□□ -0.51
CSNK1E-202ENST00000366216 C1orf127Q8N9H9 656 aa11.88□□□□□ -0.51
CSNK1E-202ENST00000366216 CXorf38Q8TB03 319 aa11.88□□□□□ -0.51
CSNK1E-202ENST00000366216 SLC20A1Q8WUM9 679 aa11.88□□□□□ -0.51
CSNK1E-202ENST00000366216 SMARCD2Q92925 531 aa11.88□□□□□ -0.51
CSNK1E-202ENST00000366216 MSANTD3Q96H12 275 aa11.88□□□□□ -0.51
CSNK1E-202ENST00000366216 CALR3Q96L12 384 aaKnown RBP11.88□□□□□ -0.51
CSNK1E-202ENST00000366216 CORO1BQ9BR76 489 aa11.88□□□□□ -0.51
CSNK1E-202ENST00000366216 XYLT2Q9H1B5 865 aa11.88□□□□□ -0.51
CSNK1E-202ENST00000366216 ISCUQ9H1K1 167 aa11.88□□□□□ -0.51
CSNK1E-202ENST00000366216 FAM124BQ9H5Z6 455 aaPredicted RBP11.88□□□□□ -0.51
CSNK1E-202ENST00000366216 VPS45Q9NRW7 570 aa11.88□□□□□ -0.51
CSNK1E-202ENST00000366216 SIX4Q9UIU6 781 aa11.88□□□□□ -0.51
CSNK1E-202ENST00000366216 SALL4Q9UJQ4 1053 aa11.88□□□□□ -0.51
CSNK1E-202ENST00000366216 ITGA11Q9UKX5 1188 aa11.88□□□□□ -0.51
CSNK1E-202ENST00000366216 MRFAP1Q9Y605 127 aa11.88□□□□□ -0.51
CSNK1E-202ENST00000366216 CDY1Q9Y6F8 540 aa11.88□□□□□ -0.51
CSNK1E-202ENST00000366216 PTPRBP23467 1997 aa11.88□□□□□ -0.51
CSNK1E-202ENST00000366216 PLXNB3Q9ULL4 1909 aa11.88□□□□□ -0.51
CSNK1E-202ENST00000366216 ARHGEF37A1IGU5 675 aa11.87□□□□□ -0.51
CSNK1E-202ENST00000366216 WDR27A2RRH5 827 aa11.87□□□□□ -0.51
CSNK1E-202ENST00000366216 ANKRD62A6NC57 917 aa11.87□□□□□ -0.51
CSNK1E-202ENST00000366216 CTIFO43310 598 aaKnown RBP11.87□□□□□ -0.51
CSNK1E-202ENST00000366216 RTN2O75298 545 aa11.87□□□□□ -0.51
CSNK1E-202ENST00000366216 MICAL2O94851 1124 aa11.87□□□□□ -0.51
CSNK1E-202ENST00000366216 SLU7O95391 586 aaKnown RBP11.87□□□□□ -0.51
CSNK1E-202ENST00000366216 MOCS3O95396 460 aa11.87□□□□□ -0.51
CSNK1E-202ENST00000366216 VIPR2P41587 438 aa11.87□□□□□ -0.51
CSNK1E-202ENST00000366216 ZNF132P52740 706 aa11.87□□□□□ -0.51
CSNK1E-202ENST00000366216 GALCP54803 685 aa11.87□□□□□ -0.51
CSNK1E-202ENST00000366216 FMO1Q01740 532 aa11.87□□□□□ -0.51
CSNK1E-202ENST00000366216 TCEAL1Q15170 157 aa11.87□□□□□ -0.51
CSNK1E-202ENST00000366216 ZBTB6Q15916 424 aa11.87□□□□□ -0.51
CSNK1E-202ENST00000366216 XKR4Q5GH76 650 aa11.87□□□□□ -0.51
CSNK1E-202ENST00000366216 TCEAL6Q6IPX3 200 aa11.87□□□□□ -0.51
CSNK1E-202ENST00000366216 TXNDC11Q6PKC3 985 aa11.87□□□□□ -0.51
CSNK1E-202ENST00000366216 EFCAB3Q8N7B9 438 aa11.87□□□□□ -0.51
CSNK1E-202ENST00000366216 CSGALNACT1Q8TDX6 532 aa11.87□□□□□ -0.51
CSNK1E-202ENST00000366216 DEPDC1BQ8WUY9 529 aa11.87□□□□□ -0.51
CSNK1E-202ENST00000366216 TCEAL3Q969E4 200 aa11.87□□□□□ -0.51
CSNK1E-202ENST00000366216 ARID3AQ99856 593 aa11.87□□□□□ -0.51
CSNK1E-202ENST00000366216 EDEM2Q9BV94 578 aa11.87□□□□□ -0.51
CSNK1E-202ENST00000366216 PACSIN1Q9BY11 444 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms