RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 LYPLA1O75608 230 aaPredicted RBP14.36□□□□□ -0.11
COL6A1-201ENST00000361866 SUPT20HL2P0C7V6 817 aa14.36□□□□□ -0.11
COL6A1-201ENST00000361866 ALADP13716 330 aa14.36□□□□□ -0.11
COL6A1-201ENST00000361866 SLC15A2Q16348 729 aa14.36□□□□□ -0.11
COL6A1-201ENST00000361866 PCSK7Q16549 785 aa14.36□□□□□ -0.11
COL6A1-201ENST00000361866 TWF2Q6IBS0 349 aaKnown RBP14.36□□□□□ -0.11
COL6A1-201ENST00000361866 STRA8Q7Z7C7 330 aa14.36□□□□□ -0.11
COL6A1-201ENST00000361866 GLIS1Q8NBF1 620 aa14.36□□□□□ -0.11
COL6A1-201ENST00000361866 IPMKQ8NFU5 416 aa14.36□□□□□ -0.11
COL6A1-201ENST00000361866 ZSCAN18Q8TBC5 510 aaPredicted RBP14.36□□□□□ -0.11
COL6A1-201ENST00000361866 TFB1MQ8WVM0 346 aaKnown RBP14.36□□□□□ -0.11
COL6A1-201ENST00000361866 OTUD5Q96G74 571 aa14.36□□□□□ -0.11
COL6A1-201ENST00000361866 THAP1Q9NVV9 213 aa14.36□□□□□ -0.11
COL6A1-201ENST00000361866 SUN2Q9UH99 717 aa14.36□□□□□ -0.11
COL6A1-201ENST00000361866 WASF2Q9Y6W5 498 aa14.36□□□□□ -0.11
COL6A1-201ENST00000361866 CHD2O14647 1828 aaKnown RBP14.36□□□□□ -0.11
COL6A1-201ENST00000361866 ASTN2O75129 1339 aaPredicted RBP14.36□□□□□ -0.11
COL6A1-201ENST00000361866 UMODL1Q5DID0 1318 aa14.36□□□□□ -0.11
COL6A1-201ENST00000361866 RGPD1P0DJD0 1748 aa14.36□□□□□ -0.11
COL6A1-201ENST00000361866 hCG_1818297A0A087WSY0 165 aa14.36□□□□□ -0.11
COL6A1-201ENST00000361866 ABHD2P08910 425 aa14.36□□□□□ -0.11
COL6A1-201ENST00000361866 TNFSF9P41273 254 aa14.36□□□□□ -0.11
COL6A1-201ENST00000361866 IDI2Q9BXS1 227 aa14.36□□□□□ -0.11
COL6A1-201ENST00000361866 CDYLQ9Y232 598 aa14.36□□□□□ -0.11
COL6A1-201ENST00000361866 SPDYE5A6NIY4 337 aa14.36□□□□□ -0.11
COL6A1-201ENST00000361866 APOC4-APOC2K7ER74 178 aa14.36□□□□□ -0.11
COL6A1-201ENST00000361866 GSTA4O15217 222 aa14.36□□□□□ -0.11
COL6A1-201ENST00000361866 APOC2P02655 101 aa14.36□□□□□ -0.11
COL6A1-201ENST00000361866 TPH1P17752 444 aa14.36□□□□□ -0.11
COL6A1-201ENST00000361866 DACT2Q5SW24 774 aa14.36□□□□□ -0.11
COL6A1-201ENST00000361866 JOSD2Q8TAC2 188 aa14.36□□□□□ -0.11
COL6A1-201ENST00000361866 ZNF518BQ9C0D4 1074 aa14.36□□□□□ -0.11
COL6A1-201ENST00000361866 SARS2Q9NP81 518 aaKnown RBP14.36□□□□□ -0.11
COL6A1-201ENST00000361866 PLA2G4CQ9UP65 541 aa14.36□□□□□ -0.11
COL6A1-201ENST00000361866 E2F6O75461 281 aa14.36□□□□□ -0.11
COL6A1-201ENST00000361866 LSM8O95777 96 aaKnown RBP14.36□□□□□ -0.11
COL6A1-201ENST00000361866 ANPEPP15144 967 aa14.36□□□□□ -0.11
COL6A1-201ENST00000361866 ROR2Q01974 943 aaKnown RBP14.36□□□□□ -0.11
COL6A1-201ENST00000361866 ZNF786Q8N393 782 aa14.36□□□□□ -0.11
COL6A1-201ENST00000361866 RBM15BQ8NDT2 890 aaKnown RBP14.36□□□□□ -0.11
COL6A1-201ENST00000361866 CATSPER1Q8NEC5 780 aa14.36□□□□□ -0.11
COL6A1-201ENST00000361866 OPTNQ96CV9 577 aa14.36□□□□□ -0.11
COL6A1-201ENST00000361866 CATSPER2Q96P56 530 aa14.36□□□□□ -0.11
COL6A1-201ENST00000361866 CDRT15Q96T59 188 aa14.36□□□□□ -0.11
COL6A1-201ENST00000361866 GRIP2Q9C0E4 1043 aa14.36□□□□□ -0.11
COL6A1-201ENST00000361866 DEFB129Q9H1M3 183 aa14.36□□□□□ -0.11
COL6A1-201ENST00000361866 CHST12Q9NRB3 414 aa14.36□□□□□ -0.11
COL6A1-201ENST00000361866 RARBP10826 455 aa14.35□□□□□ -0.11
COL6A1-201ENST00000361866 ARPP19P56211 112 aa14.35□□□□□ -0.11
COL6A1-201ENST00000361866 CHADLQ6NUI6 762 aa14.35□□□□□ -0.11
COL6A1-201ENST00000361866 ARHGAP22Q7Z5H3 698 aa14.35□□□□□ -0.11
COL6A1-201ENST00000361866 LENG9Q96B70 501 aa14.35□□□□□ -0.11
COL6A1-201ENST00000361866 ELMO2Q96JJ3 720 aa14.35□□□□□ -0.11
COL6A1-201ENST00000361866 CADM1Q9BY67 442 aaKnown RBP14.35□□□□□ -0.11
COL6A1-201ENST00000361866 ADNPQ9H2P0 1102 aa14.35□□□□□ -0.11
COL6A1-201ENST00000361866 RNPEPQ9H4A4 650 aa14.35□□□□□ -0.11
COL6A1-201ENST00000361866 ACSS2Q9NR19 701 aa14.35□□□□□ -0.11
COL6A1-201ENST00000361866 DMAC2Q9NW81 257 aa14.35□□□□□ -0.11
COL6A1-201ENST00000361866 IGLV3-22A0A075B6J6 115 aa14.35□□□□□ -0.11
COL6A1-201ENST00000361866 UBA6A0AVT1 1052 aaPredicted RBP14.35□□□□□ -0.11
COL6A1-201ENST00000361866 SMNDC1O75940 238 aaKnown RBP eCLIP14.35□□□□□ -0.11
COL6A1-201ENST00000361866 ASMTLO95671 621 aa14.35□□□□□ -0.11
COL6A1-201ENST00000361866 AMPD1P23109 780 aa14.35□□□□□ -0.11
COL6A1-201ENST00000361866 MGAT1P26572 445 aa14.35□□□□□ -0.11
COL6A1-201ENST00000361866 SPIRE1Q08AE8 756 aa14.35□□□□□ -0.11
COL6A1-201ENST00000361866 IER5Q5VY09 327 aa14.35□□□□□ -0.11
COL6A1-201ENST00000361866 LPCAT4Q643R3 524 aa14.35□□□□□ -0.11
COL6A1-201ENST00000361866 BNC2Q6ZN30 1099 aaPredicted RBP14.35□□□□□ -0.11
COL6A1-201ENST00000361866 DAW1Q8N136 415 aa14.35□□□□□ -0.11
COL6A1-201ENST00000361866 SLC7A14Q8TBB6 771 aa14.35□□□□□ -0.11
COL6A1-201ENST00000361866 NRBF2Q96F24 287 aa14.35□□□□□ -0.11
COL6A1-201ENST00000361866 COPS7BQ9H9Q2 264 aaPredicted RBP14.35□□□□□ -0.11
COL6A1-201ENST00000361866 MROH7Q68CQ1 1323 aa14.35□□□□□ -0.11
COL6A1-201ENST00000361866 RGPD2P0DJD1 1756 aa14.35□□□□□ -0.11
COL6A1-201ENST00000361866 C3orf70A6NLC5 250 aaPredicted RBP14.35□□□□□ -0.11
COL6A1-201ENST00000361866 PDAP1Q13442 181 aaKnown RBP14.35□□□□□ -0.11
COL6A1-201ENST00000361866 MFN1Q8IWA4 741 aa14.35□□□□□ -0.11
COL6A1-201ENST00000361866 ULK2Q8IYT8 1036 aa14.35□□□□□ -0.11
COL6A1-201ENST00000361866 PIWIL2Q8TC59 973 aaKnown RBP14.35□□□□□ -0.11
COL6A1-201ENST00000361866 RNF139Q8WU17 664 aa14.35□□□□□ -0.11
COL6A1-201ENST00000361866 DTNBP1Q96EV8 351 aa14.35□□□□□ -0.11
COL6A1-201ENST00000361866 DCUN1D5Q9BTE7 237 aa14.35□□□□□ -0.11
COL6A1-201ENST00000361866 TCF7L2Q9NQB0 619 aa14.35□□□□□ -0.11
COL6A1-201ENST00000361866 ANGPTL3Q9Y5C1 460 aa14.35□□□□□ -0.11
COL6A1-201ENST00000361866 MYH13Q9UKX3 1938 aa14.35□□□□□ -0.11
COL6A1-201ENST00000361866 E5RJQ4 531 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 EEF2KO00418 725 aaKnown RBP14.34□□□□□ -0.11
COL6A1-201ENST00000361866 PAMP19021 973 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 CYP2F1P24903 491 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 PLIN5Q00G26 463 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 NRF1Q16656 503 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 ZBTB41Q5SVQ8 909 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 FNBP1LQ5T0N5 605 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 KCNT2Q6UVM3 1135 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 SNX32Q86XE0 403 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 COLGALT1Q8NBJ5 622 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 RDM1Q8NG50 284 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 CDC26Q8NHZ8 85 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 BSNDQ8WZ55 320 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 TMEM176AQ96HP8 235 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms