RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 FYNP06241 537 aa21.9■■□□□ 1.1
MAP1LC3A-201ENST00000360668 TFE3P19532 575 aaPredicted RBP21.9■■□□□ 1.1
MAP1LC3A-201ENST00000360668 SULT1E1P49888 294 aa21.9■■□□□ 1.1
MAP1LC3A-201ENST00000360668 SLC5A3P53794 718 aa21.9■■□□□ 1.1
MAP1LC3A-201ENST00000360668 HABP4Q5JVS0 413 aaKnown RBP21.9■■□□□ 1.1
MAP1LC3A-201ENST00000360668 BEND6Q5SZJ8 279 aaPredicted RBP21.9■■□□□ 1.1
MAP1LC3A-201ENST00000360668 SLC8B1Q6J4K2 584 aa21.9■■□□□ 1.1
MAP1LC3A-201ENST00000360668 SCYL2Q6P3W7 929 aa21.9■■□□□ 1.1
MAP1LC3A-201ENST00000360668 PSRC1Q6PGN9 363 aaPredicted RBP21.9■■□□□ 1.1
MAP1LC3A-201ENST00000360668 CCNI2Q6ZMN8 369 aaPredicted RBP21.9■■□□□ 1.1
MAP1LC3A-201ENST00000360668 BEND5Q7L4P6 421 aa21.9■■□□□ 1.1
MAP1LC3A-201ENST00000360668 SCN4BQ8IWT1 228 aa21.9■■□□□ 1.1
MAP1LC3A-201ENST00000360668 KCTD6Q8NC69 237 aa21.9■■□□□ 1.1
MAP1LC3A-201ENST00000360668 RIN2Q8WYP3 895 aaPredicted RBP21.9■■□□□ 1.1
MAP1LC3A-201ENST00000360668 MAGOHBQ96A72 148 aaKnown RBP21.9■■□□□ 1.1
MAP1LC3A-201ENST00000360668 HERC2P3Q9BVR0 1158 aa21.9■■□□□ 1.1
MAP1LC3A-201ENST00000360668 HEMGNQ9BXL5 484 aa21.9■■□□□ 1.1
MAP1LC3A-201ENST00000360668 ADAM33Q9BZ11 813 aa21.9■■□□□ 1.1
MAP1LC3A-201ENST00000360668 LRRC19Q9H756 370 aa21.9■■□□□ 1.1
MAP1LC3A-201ENST00000360668 SPG21Q9NZD8 308 aa21.9■■□□□ 1.1
MAP1LC3A-201ENST00000360668 OGFRQ9NZT2 677 aa21.9■■□□□ 1.1
MAP1LC3A-201ENST00000360668 COL4A4P53420 1690 aaPredicted RBP21.89■■□□□ 1.1
MAP1LC3A-201ENST00000360668 MTMR11A4FU01 709 aa21.89■■□□□ 1.09
MAP1LC3A-201ENST00000360668 CAPN9O14815 690 aa21.89■■□□□ 1.09
MAP1LC3A-201ENST00000360668 MDM4O15151 490 aa21.89■■□□□ 1.09
MAP1LC3A-201ENST00000360668 FNTAP49354 379 aa21.89■■□□□ 1.09
MAP1LC3A-201ENST00000360668 ARPP19P56211 112 aa21.89■■□□□ 1.09
MAP1LC3A-201ENST00000360668 HTRA4P83105 476 aaPredicted RBP21.89■■□□□ 1.09
MAP1LC3A-201ENST00000360668 SLC7A5Q01650 507 aa21.89■■□□□ 1.09
MAP1LC3A-201ENST00000360668 DHX34Q14147 1143 aaKnown RBP21.89■■□□□ 1.09
MAP1LC3A-201ENST00000360668 LLGL1Q15334 1064 aa21.89■■□□□ 1.09
MAP1LC3A-201ENST00000360668 PSMD5Q16401 504 aa21.89■■□□□ 1.09
MAP1LC3A-201ENST00000360668 PRSS55Q6UWB4 352 aaPredicted RBP21.89■■□□□ 1.09
MAP1LC3A-201ENST00000360668 ATAD1Q8NBU5 361 aa21.89■■□□□ 1.09
MAP1LC3A-201ENST00000360668 FBXO22Q8NEZ5 403 aa21.89■■□□□ 1.09
MAP1LC3A-201ENST00000360668 HSPH1Q92598 858 aa21.89■■□□□ 1.09
MAP1LC3A-201ENST00000360668 PGLYRP2Q96PD5 576 aa21.89■■□□□ 1.09
MAP1LC3A-201ENST00000360668 PCDH10Q9P2E7 1040 aa21.89■■□□□ 1.09
MAP1LC3A-201ENST00000360668 PCYOX1Q9UHG3 505 aa21.89■■□□□ 1.09
MAP1LC3A-201ENST00000360668 AMACRQ9UHK6 382 aa21.89■■□□□ 1.09
MAP1LC3A-201ENST00000360668 HEXIM1O94992 359 aaKnown RBP21.88■■□□□ 1.09
MAP1LC3A-201ENST00000360668 GJB5O95377 273 aa21.88■■□□□ 1.09
MAP1LC3A-201ENST00000360668 TNFRSF8P28908 595 aa21.88■■□□□ 1.09
MAP1LC3A-201ENST00000360668 PPM1AP35813 382 aa21.88■■□□□ 1.09
MAP1LC3A-201ENST00000360668 ARSEP51690 589 aa21.88■■□□□ 1.09
MAP1LC3A-201ENST00000360668 MRPS25P82663 173 aaKnown RBP21.88■■□□□ 1.09
MAP1LC3A-201ENST00000360668 PDK2Q15119 407 aa21.88■■□□□ 1.09
MAP1LC3A-201ENST00000360668 TMEM240Q5SV17 173 aa21.88■■□□□ 1.09
MAP1LC3A-201ENST00000360668 OTUD1Q5VV17 481 aaPredicted RBP21.88■■□□□ 1.09
MAP1LC3A-201ENST00000360668 KIAA1841Q6NSI8 718 aa21.88■■□□□ 1.09
MAP1LC3A-201ENST00000360668 VSIG1Q86XK7 387 aa21.88■■□□□ 1.09
MAP1LC3A-201ENST00000360668 SCAMP5Q8TAC9 235 aa21.88■■□□□ 1.09
MAP1LC3A-201ENST00000360668 AAASQ9NRG9 546 aa21.88■■□□□ 1.09
MAP1LC3A-201ENST00000360668 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.88■■□□□ 1.09
MAP1LC3A-201ENST00000360668 NAALADL1Q9UQQ1 740 aa21.88■■□□□ 1.09
MAP1LC3A-201ENST00000360668 CDY1Q9Y6F8 540 aa21.88■■□□□ 1.09
MAP1LC3A-201ENST00000360668 RDXP35241 583 aaKnown RBP21.87■■□□□ 1.09
MAP1LC3A-201ENST00000360668 COILP38432 576 aaPredicted RBP21.87■■□□□ 1.09
MAP1LC3A-201ENST00000360668 DSG1Q02413 1049 aa21.87■■□□□ 1.09
MAP1LC3A-201ENST00000360668 ERMARDQ5T6L9 678 aa21.87■■□□□ 1.09
MAP1LC3A-201ENST00000360668 SYPL2Q5VXT5 272 aa21.87■■□□□ 1.09
MAP1LC3A-201ENST00000360668 RNF19BQ6ZMZ0 732 aa21.87■■□□□ 1.09
MAP1LC3A-201ENST00000360668 DDX53Q86TM3 631 aaKnown RBP21.87■■□□□ 1.09
MAP1LC3A-201ENST00000360668 MAP7D3Q8IWC1 876 aa21.87■■□□□ 1.09
MAP1LC3A-201ENST00000360668 NUP93Q8N1F7 819 aa21.87■■□□□ 1.09
MAP1LC3A-201ENST00000360668 PGAP3Q96FM1 320 aaPredicted RBP21.87■■□□□ 1.09
MAP1LC3A-201ENST00000360668 GDF15Q99988 308 aa21.87■■□□□ 1.09
MAP1LC3A-201ENST00000360668 STK39Q9UEW8 545 aa21.87■■□□□ 1.09
MAP1LC3A-201ENST00000360668 FAM187AA6NFU0 413 aa21.87■■□□□ 1.09
MAP1LC3A-201ENST00000360668 VNN2O95498 520 aa21.87■■□□□ 1.09
MAP1LC3A-201ENST00000360668 HAPLN1P10915 354 aaPredicted RBP21.87■■□□□ 1.09
MAP1LC3A-201ENST00000360668 NCAM1P13591 858 aa21.87■■□□□ 1.09
MAP1LC3A-201ENST00000360668 KRT10P13645 584 aa21.87■■□□□ 1.09
MAP1LC3A-201ENST00000360668 GLUD2P49448 558 aa21.87■■□□□ 1.09
MAP1LC3A-201ENST00000360668 EPHB4P54760 987 aa21.87■■□□□ 1.09
MAP1LC3A-201ENST00000360668 CDH6P55285 790 aa21.87■■□□□ 1.09
MAP1LC3A-201ENST00000360668 DR1Q01658 176 aa21.87■■□□□ 1.09
MAP1LC3A-201ENST00000360668 DDR2Q16832 855 aa21.87■■□□□ 1.09
MAP1LC3A-201ENST00000360668 BSPRYQ5W0U4 402 aa21.87■■□□□ 1.09
MAP1LC3A-201ENST00000360668 KAZNQ674X7 775 aa21.87■■□□□ 1.09
MAP1LC3A-201ENST00000360668 CCDC137Q6PK04 289 aaKnown RBP21.87■■□□□ 1.09
MAP1LC3A-201ENST00000360668 HDXQ7Z353 690 aa21.87■■□□□ 1.09
MAP1LC3A-201ENST00000360668 PSTKQ8IV42 348 aaKnown RBP21.87■■□□□ 1.09
MAP1LC3A-201ENST00000360668 IFT20Q8IY31 132 aa21.87■■□□□ 1.09
MAP1LC3A-201ENST00000360668 EIF1ADQ8N9N8 165 aaKnown RBP21.87■■□□□ 1.09
MAP1LC3A-201ENST00000360668 SPATA17Q96L03 361 aa21.87■■□□□ 1.09
MAP1LC3A-201ENST00000360668 SNRNP25Q9BV90 132 aaKnown RBP21.87■■□□□ 1.09
MAP1LC3A-201ENST00000360668 DCLK3Q9C098 648 aa21.87■■□□□ 1.09
MAP1LC3A-201ENST00000360668 FBXO44Q9H4M3 255 aa21.87■■□□□ 1.09
MAP1LC3A-201ENST00000360668 GDF3Q9NR23 364 aa21.87■■□□□ 1.09
MAP1LC3A-201ENST00000360668 CALCOCO1Q9P1Z2 691 aa21.87■■□□□ 1.09
MAP1LC3A-201ENST00000360668 KIAA1671Q9BY89 1806 aa21.86■■□□□ 1.09
MAP1LC3A-201ENST00000360668 ZNF487B1APH4 448 aa21.86■■□□□ 1.09
MAP1LC3A-201ENST00000360668 BHMG1C9JSJ3 638 aaPredicted RBP21.86■■□□□ 1.09
MAP1LC3A-201ENST00000360668 M0QYT0 321 aa21.86■■□□□ 1.09
MAP1LC3A-201ENST00000360668 MAGEA10P43363 369 aaPredicted RBP21.86■■□□□ 1.09
MAP1LC3A-201ENST00000360668 ATXN1P54253 815 aaKnown RBP21.86■■□□□ 1.09
MAP1LC3A-201ENST00000360668 CCNG2Q16589 344 aa21.86■■□□□ 1.09
MAP1LC3A-201ENST00000360668 TTC27Q6P3X3 843 aa21.86■■□□□ 1.09
MAP1LC3A-201ENST00000360668 FAM71BQ8TC56 605 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms