RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 PTGES3LE9PB15 166 aa16.5■□□□□ 0.23
COL18A1-203ENST00000359759 PON1P27169 355 aa16.5■□□□□ 0.23
COL18A1-203ENST00000359759 SLC1A6P48664 564 aa16.5■□□□□ 0.23
COL18A1-203ENST00000359759 GRIK3Q13003 919 aa16.5■□□□□ 0.23
COL18A1-203ENST00000359759 CCNIQ14094 377 aa16.5■□□□□ 0.23
COL18A1-203ENST00000359759 ZNF677Q86XU0 584 aa16.5■□□□□ 0.23
COL18A1-203ENST00000359759 GATAD2AQ86YP4 633 aa16.5■□□□□ 0.23
COL18A1-203ENST00000359759 CYP4Z2PQ8N1L4 340 aa16.5■□□□□ 0.23
COL18A1-203ENST00000359759 RNASE11Q8TAA1 199 aaKnown RBP16.5■□□□□ 0.23
COL18A1-203ENST00000359759 KCNH4Q9UQ05 1017 aa16.5■□□□□ 0.23
COL18A1-203ENST00000359759 MRPL42Q9Y6G3 142 aaKnown RBP16.5■□□□□ 0.23
COL18A1-203ENST00000359759 SMIM31A0A1B0GVY4 71 aa16.5■□□□□ 0.23
COL18A1-203ENST00000359759 SMAPO00193 183 aa16.5■□□□□ 0.23
COL18A1-203ENST00000359759 CCNT2O60583 730 aaKnown RBP16.5■□□□□ 0.23
COL18A1-203ENST00000359759 RAG1P15918 1043 aa16.5■□□□□ 0.23
COL18A1-203ENST00000359759 CLK2P49760 499 aaKnown RBP16.5■□□□□ 0.23
COL18A1-203ENST00000359759 ANXA11P50995 505 aaKnown RBP16.5■□□□□ 0.23
COL18A1-203ENST00000359759 IFNLR1Q8IU57 520 aaPredicted RBP16.5■□□□□ 0.23
COL18A1-203ENST00000359759 RNF148Q8N7C7 305 aa16.5■□□□□ 0.23
COL18A1-203ENST00000359759 TARS2Q9BW92 718 aaKnown RBP16.5■□□□□ 0.23
COL18A1-203ENST00000359759 FLT1P17948 1338 aa16.5■□□□□ 0.23
COL18A1-203ENST00000359759 TMED8Q6PL24 325 aaPredicted RBP16.5■□□□□ 0.23
COL18A1-203ENST00000359759 SPPL2AQ8TCT8 520 aa16.5■□□□□ 0.23
COL18A1-203ENST00000359759 CAMKK2Q96RR4 588 aa16.5■□□□□ 0.23
COL18A1-203ENST00000359759 SLC38A7Q9NVC3 462 aa16.5■□□□□ 0.23
COL18A1-203ENST00000359759 ARIH1Q9Y4X5 557 aaPredicted RBP16.5■□□□□ 0.23
COL18A1-203ENST00000359759 ZNF609O15014 1411 aa16.5■□□□□ 0.23
COL18A1-203ENST00000359759 PHGDHO43175 533 aaKnown RBP16.5■□□□□ 0.23
COL18A1-203ENST00000359759 STARD3Q14849 445 aa16.5■□□□□ 0.23
COL18A1-203ENST00000359759 LRRC6Q86X45 466 aa16.5■□□□□ 0.23
COL18A1-203ENST00000359759 SEPT1Q8WYJ6 367 aa16.5■□□□□ 0.23
COL18A1-203ENST00000359759 CEP41Q9BYV8 373 aa16.5■□□□□ 0.23
COL18A1-203ENST00000359759 TFDP3Q5H9I0 405 aa16.5■□□□□ 0.23
COL18A1-203ENST00000359759 ARMC3Q5W041 872 aa16.5■□□□□ 0.23
COL18A1-203ENST00000359759 ACOT1Q86TX2 421 aa16.5■□□□□ 0.23
COL18A1-203ENST00000359759 NCAPD2Q15021 1401 aa16.5■□□□□ 0.23
COL18A1-203ENST00000359759 STX4Q12846 297 aa16.49■□□□□ 0.23
COL18A1-203ENST00000359759 POLD3Q15054 466 aaPredicted RBP16.49■□□□□ 0.23
COL18A1-203ENST00000359759 TSC22D1Q15714 1073 aa16.49■□□□□ 0.23
COL18A1-203ENST00000359759 PRAMEF18Q5VWM3 479 aa16.49■□□□□ 0.23
COL18A1-203ENST00000359759 MIB1Q86YT6 1006 aa16.49■□□□□ 0.23
COL18A1-203ENST00000359759 ZCCHC7Q8N3Z6 543 aaKnown RBP16.49■□□□□ 0.23
COL18A1-203ENST00000359759 UBE2OQ9C0C9 1292 aaKnown RBP16.49■□□□□ 0.23
COL18A1-203ENST00000359759 CEP44Q9C0F1 390 aa16.49■□□□□ 0.23
COL18A1-203ENST00000359759 CENPXA8MT69 81 aa16.49■□□□□ 0.23
COL18A1-203ENST00000359759 PAX7P23759 505 aa16.49■□□□□ 0.23
COL18A1-203ENST00000359759 PIK3R1P27986 724 aa16.49■□□□□ 0.23
COL18A1-203ENST00000359759 PCSK1P29120 753 aa16.49■□□□□ 0.23
COL18A1-203ENST00000359759 MTFMTQ96DP5 389 aaKnown RBP16.49■□□□□ 0.23
COL18A1-203ENST00000359759 RAD21L1Q9H4I0 556 aa16.49■□□□□ 0.23
COL18A1-203ENST00000359759 SPACA6W5XKT8 324 aa16.49■□□□□ 0.23
COL18A1-203ENST00000359759 E7ENQ6 273 aa16.49■□□□□ 0.23
COL18A1-203ENST00000359759 NDUFB10O96000 172 aa16.49■□□□□ 0.23
COL18A1-203ENST00000359759 TSHZ1Q6ZSZ6 1077 aa16.49■□□□□ 0.23
COL18A1-203ENST00000359759 CPB2Q96IY4 423 aa16.49■□□□□ 0.23
COL18A1-203ENST00000359759 MTMR12Q9C0I1 747 aa16.49■□□□□ 0.23
COL18A1-203ENST00000359759 NDUFA13Q9P0J0 144 aa16.49■□□□□ 0.23
COL18A1-203ENST00000359759 AAR2Q9Y312 384 aaKnown RBP16.49■□□□□ 0.23
COL18A1-203ENST00000359759 KBTBD13C9JR72 458 aa16.49■□□□□ 0.23
COL18A1-203ENST00000359759 KPNA4O00629 521 aaPredicted RBP16.49■□□□□ 0.23
COL18A1-203ENST00000359759 YY1P25490 414 aa16.49■□□□□ 0.23
COL18A1-203ENST00000359759 PTPN4P29074 926 aa16.49■□□□□ 0.23
COL18A1-203ENST00000359759 KRT20P35900 424 aa16.49■□□□□ 0.23
COL18A1-203ENST00000359759 CYP2R1Q6VVX0 501 aa16.49■□□□□ 0.23
COL18A1-203ENST00000359759 ERLEC1Q96DZ1 483 aa16.49■□□□□ 0.23
COL18A1-203ENST00000359759 CCDC126Q96EE4 140 aa16.49■□□□□ 0.23
COL18A1-203ENST00000359759 POP1Q99575 1024 aaKnown RBP16.49■□□□□ 0.23
COL18A1-203ENST00000359759 RUSC1Q9BVN2 902 aa16.49■□□□□ 0.23
COL18A1-203ENST00000359759 KATNAL1Q9BW62 490 aa16.49■□□□□ 0.23
COL18A1-203ENST00000359759 GPAMQ9HCL2 828 aa16.49■□□□□ 0.23
COL18A1-203ENST00000359759 INPP4BO15327 924 aa16.49■□□□□ 0.23
COL18A1-203ENST00000359759 MTSS1O43312 755 aa16.49■□□□□ 0.23
COL18A1-203ENST00000359759 CPA3P15088 417 aa16.49■□□□□ 0.23
COL18A1-203ENST00000359759 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.49■□□□□ 0.233e-9■■■■■ 26.9
COL18A1-203ENST00000359759 NSUN4Q96CB9 384 aaKnown RBP16.49■□□□□ 0.23
COL18A1-203ENST00000359759 SH3BP4Q9P0V3 963 aa16.49■□□□□ 0.23
COL18A1-203ENST00000359759 WHRNQ9P202 907 aa16.49■□□□□ 0.23
COL18A1-203ENST00000359759 RFX7Q2KHR2 1363 aa16.49■□□□□ 0.23
COL18A1-203ENST00000359759 F8VZ95 297 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 CLTBP09497 229 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 LBPP18428 481 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 CYP2B6P20813 491 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 C21orf59P57076 290 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 GSTA3Q16772 222 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 EDRF1Q3B7T1 1238 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 APLFQ8IW19 511 aaPredicted RBP16.48■□□□□ 0.23
COL18A1-203ENST00000359759 PPP2R3CQ969Q6 453 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 RXFP1Q9HBX9 757 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 NARFQ9UHQ1 456 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 TBX20Q9UMR3 447 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 A0A0G2JLW4 131 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 F5H5T6 163 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 AP1G2O75843 785 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 SRP54P61011 504 aaKnown RBP16.48■□□□□ 0.23
COL18A1-203ENST00000359759 R3HDM1Q15032 1099 aaKnown RBP16.48■□□□□ 0.23
COL18A1-203ENST00000359759 PLCL1Q15111 1095 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 NR6A1Q15406 480 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 PHACTR4Q8IZ21 702 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 OSBPL6Q9BZF3 934 aa16.48■□□□□ 0.23
COL18A1-203ENST00000359759 MIEF1Q9NQG6 463 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms