RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 GRK3P35626 688 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 R3HDM1Q15032 1099 aaKnown RBP18.92■□□□□ 0.62
SHANK1-202ENST00000359082 FLCNQ8NFG4 579 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 PAFAH2Q99487 392 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 C10orf88Q9H8K7 445 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 VTA1Q9NP79 307 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 SPATA31A6Q5VVP1 1343 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 TIMM44O43615 452 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 MED24O75448 989 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 CYP7B1O75881 506 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 B3GAT3O94766 335 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 STAG3L1P0CL83 205 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 ALDH9A1P49189 494 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 CLCN3P51790 818 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 RHOAP61586 193 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 COX10Q12887 443 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 PTPRHQ9HD43 1115 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 AP4S1Q9Y587 144 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 ERVK-24P63145 666 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 SREBF2Q12772 1141 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 CTXN3Q4LDR2 81 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 LRRC40Q9H9A6 602 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 ARHGEF3Q9NR81 526 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 GTF3C4Q9UKN8 822 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 USP18Q9UMW8 372 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 USP42Q9H9J4 1324 aaKnown RBP18.92■□□□□ 0.62
SHANK1-202ENST00000359082 RNASEH1O60930 286 aaKnown RBP18.92■□□□□ 0.62
SHANK1-202ENST00000359082 GLP2RO95838 553 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 CCT8P50990 548 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 HUNKP57058 714 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 YWHAZP63104 245 aaKnown RBP18.92■□□□□ 0.62
SHANK1-202ENST00000359082 ARMCX4Q5H9R4 360 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 ROGDIQ9GZN7 287 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 PDP2Q9P2J9 529 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 SLC12A8A0AV02 714 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 MAP3K13O43283 966 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 CRTAMO95727 393 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 GRK2P25098 689 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 CYB5D1Q6P9G0 228 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 CATSPER2Q96P56 530 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 EMILIN2Q9BXX0 1053 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 KLHL4Q9C0H6 718 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 DIABLOQ9NR28 239 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 TAGLN3Q9UI15 199 aa18.92■□□□□ 0.62
SHANK1-202ENST00000359082 CCNT2O60583 730 aaKnown RBP18.91■□□□□ 0.62
SHANK1-202ENST00000359082 CAMTA2O94983 1202 aa18.91■□□□□ 0.62
SHANK1-202ENST00000359082 MAPK9P45984 424 aa18.91■□□□□ 0.62
SHANK1-202ENST00000359082 ST13P50502 369 aaKnown RBP18.91■□□□□ 0.62
SHANK1-202ENST00000359082 MTDHQ86UE4 582 aaKnown RBP18.91■□□□□ 0.62
SHANK1-202ENST00000359082 HERC6Q8IVU3 1022 aa18.91■□□□□ 0.62
SHANK1-202ENST00000359082 TRPC4Q9UBN4 977 aa18.91■□□□□ 0.62
SHANK1-202ENST00000359082 AP4E1Q9UPM8 1137 aa18.91■□□□□ 0.62
SHANK1-202ENST00000359082 KATNA1O75449 491 aa18.91■□□□□ 0.62
SHANK1-202ENST00000359082 CYP11B1P15538 503 aa18.91■□□□□ 0.62
SHANK1-202ENST00000359082 OASLQ15646 514 aaKnown RBP18.91■□□□□ 0.62
SHANK1-202ENST00000359082 CLEC17AQ6ZS10 378 aa18.91■□□□□ 0.62
SHANK1-202ENST00000359082 NT5DC3Q86UY8 548 aa18.91■□□□□ 0.62
SHANK1-202ENST00000359082 DEFB129Q9H1M3 183 aa18.91■□□□□ 0.62
SHANK1-202ENST00000359082 WHRNQ9P202 907 aa18.91■□□□□ 0.62
SHANK1-202ENST00000359082 CBX4O00257 560 aa18.91■□□□□ 0.62
SHANK1-202ENST00000359082 FAM20BO75063 409 aa18.91■□□□□ 0.62
SHANK1-202ENST00000359082 BAIAP3O94812 1187 aa18.91■□□□□ 0.62
SHANK1-202ENST00000359082 CTDNEP1O95476 244 aa18.91■□□□□ 0.62
SHANK1-202ENST00000359082 ICAM1P05362 532 aa18.91■□□□□ 0.62
SHANK1-202ENST00000359082 ITGALP20701 1170 aa18.91■□□□□ 0.62
SHANK1-202ENST00000359082 EIF2B5Q13144 721 aaKnown RBP18.91■□□□□ 0.62
SHANK1-202ENST00000359082 SPOCD1Q6ZMY3 1216 aa18.91■□□□□ 0.62
SHANK1-202ENST00000359082 RDM1Q8NG50 284 aa18.91■□□□□ 0.62
SHANK1-202ENST00000359082 TMEM169Q96HH4 297 aa18.91■□□□□ 0.62
SHANK1-202ENST00000359082 TMBIM4Q9HC24 238 aa18.91■□□□□ 0.62
SHANK1-202ENST00000359082 GPAMQ9HCL2 828 aa18.91■□□□□ 0.62
SHANK1-202ENST00000359082 SYBUQ9NX95 663 aa18.91■□□□□ 0.62
SHANK1-202ENST00000359082 YWHAQP27348 245 aa18.91■□□□□ 0.62
SHANK1-202ENST00000359082 TYW3Q6IPR3 259 aaKnown RBP18.91■□□□□ 0.62
SHANK1-202ENST00000359082 REXO1L1PQ8IX06 675 aa18.91■□□□□ 0.62
SHANK1-202ENST00000359082 HDHD2Q9H0R4 259 aa18.91■□□□□ 0.62
SHANK1-202ENST00000359082 ATP6V1HQ9UI12 483 aa18.91■□□□□ 0.62
SHANK1-202ENST00000359082 CKBP12277 381 aa18.91■□□□□ 0.62
SHANK1-202ENST00000359082 FDPSP14324 419 aaKnown RBP18.91■□□□□ 0.62
SHANK1-202ENST00000359082 VAC14Q08AM6 782 aa18.91■□□□□ 0.62
SHANK1-202ENST00000359082 SLC47A2Q86VL8 602 aa18.91■□□□□ 0.62
SHANK1-202ENST00000359082 MRPS31Q92665 395 aaKnown RBP18.91■□□□□ 0.62
SHANK1-202ENST00000359082 SLC2A4P14672 509 aa18.9■□□□□ 0.62
SHANK1-202ENST00000359082 FBXO16Q8IX29 292 aaPredicted RBP18.9■□□□□ 0.62
SHANK1-202ENST00000359082 ZNF34Q8IZ26 560 aa18.9■□□□□ 0.62
SHANK1-202ENST00000359082 C19orf18Q8NEA5 215 aa18.9■□□□□ 0.62
SHANK1-202ENST00000359082 FIG4Q92562 907 aa18.9■□□□□ 0.62
SHANK1-202ENST00000359082 SPRTNQ9H040 489 aaPredicted RBP18.9■□□□□ 0.62
SHANK1-202ENST00000359082 FLT3P36888 993 aa18.9■□□□□ 0.62
SHANK1-202ENST00000359082 CORO7P57737 925 aa18.9■□□□□ 0.62
SHANK1-202ENST00000359082 VPS72Q15906 364 aa18.9■□□□□ 0.62
SHANK1-202ENST00000359082 ERGIC2Q96RQ1 377 aa18.9■□□□□ 0.62
SHANK1-202ENST00000359082 PABPC3Q9H361 631 aaKnown RBP18.9■□□□□ 0.62
SHANK1-202ENST00000359082 ACADMP11310 421 aa18.9■□□□□ 0.62
SHANK1-202ENST00000359082 DSG3P32926 999 aa18.9■□□□□ 0.62
SHANK1-202ENST00000359082 SLC44A4Q53GD3 710 aa18.9■□□□□ 0.62
SHANK1-202ENST00000359082 KRT77Q7Z794 578 aa18.9■□□□□ 0.62
SHANK1-202ENST00000359082 ATG16L2Q8NAA4 619 aa18.9■□□□□ 0.62
SHANK1-202ENST00000359082 SPIRE2Q8WWL2 714 aa18.9■□□□□ 0.62
SHANK1-202ENST00000359082 ERCC6L2Q5T890 1561 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms