RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 ZNF317Q96PQ6 595 aaPredicted RBP15.51■□□□□ 0.07
GABPB1-202ENST00000359031 SENP6Q9GZR1 1112 aaPredicted RBP15.51■□□□□ 0.07
GABPB1-202ENST00000359031 VPS37BQ9H9H4 285 aa15.51■□□□□ 0.07
GABPB1-202ENST00000359031 FAM105AQ9NUU6 356 aa15.51■□□□□ 0.07
GABPB1-202ENST00000359031 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.51■□□□□ 0.07
GABPB1-202ENST00000359031 NAALADL1Q9UQQ1 740 aa15.51■□□□□ 0.07
GABPB1-202ENST00000359031 MKI67P46013 3256 aaKnown RBP15.51■□□□□ 0.07
GABPB1-202ENST00000359031 TMEM120BA0PK00 339 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 H7C0C1 242 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 CYB561D2O14569 222 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 KIAA0754O94854 1291 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 IL4RP24394 825 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 TKTP29401 623 aaKnown RBP15.5■□□□□ 0.07
GABPB1-202ENST00000359031 ATP5OP48047 213 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 BCAR1P56945 870 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 PPARDQ03181 441 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 NBPF20Q3BBV1 942 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 ZC3H12AQ5D1E8 599 aaKnown RBP15.5■□□□□ 0.07
GABPB1-202ENST00000359031 GKAP1Q5VSY0 366 aaPredicted RBP15.5■□□□□ 0.07
GABPB1-202ENST00000359031 CPLX4Q7Z7G2 160 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 CDKL3Q8IVW4 592 aaPredicted RBP15.5■□□□□ 0.07
GABPB1-202ENST00000359031 TMEM86AQ8N2M4 240 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 SH3TC2Q8TF17 1288 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 CLEC4CQ8WTT0 213 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 DUSP16Q9BY84 665 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 NSRP1Q9H0G5 558 aaKnown RBP15.5■□□□□ 0.07
GABPB1-202ENST00000359031 C10orf88Q9H8K7 445 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 UBN1Q9NPG3 1134 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 GPATCH2LQ9NWQ4 482 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 SENP1Q9P0U3 644 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 PAK5Q9P286 719 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 SLC24A2Q9UI40 661 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 ST3GAL5Q9UNP4 418 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 TSC2P49815 1807 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 BCLAF3A2AJT9 711 aaKnown RBP15.5■□□□□ 0.07
GABPB1-202ENST00000359031 GABRDO14764 452 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 CHADO15335 359 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 TMEM63AO94886 807 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 BRAFP15056 766 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 NPR3P17342 541 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 BASP1P80723 227 aaKnown RBP15.5■□□□□ 0.07
GABPB1-202ENST00000359031 MGAT3Q09327 533 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 CBLBQ13191 982 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 TMED2Q15363 201 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 QPCTQ16769 361 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 GDF6Q6KF10 455 aaPredicted RBP15.5■□□□□ 0.07
GABPB1-202ENST00000359031 C1orf228Q6PIY5 440 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 CXCL17Q6UXB2 119 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 C4orf22Q6V702 233 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 SERINC5Q86VE9 423 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 PSTKQ8IV42 348 aaKnown RBP15.5■□□□□ 0.07
GABPB1-202ENST00000359031 CCDC13Q8IYE1 715 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 CACNA2D3Q8IZS8 1091 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 FUKQ8N0W3 1084 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 PDIK1LQ8N165 341 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 PCDH19Q8TAB3 1148 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 KCTD13Q8WZ19 329 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 TRIB2Q92519 343 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 ZFP42Q96MM3 310 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 PRMT1Q99873 361 aaKnown RBP15.5■□□□□ 0.07
GABPB1-202ENST00000359031 FRMD8Q9BZ67 464 aaPredicted RBP15.5■□□□□ 0.07
GABPB1-202ENST00000359031 TSPYL2Q9H2G4 693 aaPredicted RBP15.5■□□□□ 0.07
GABPB1-202ENST00000359031 PRDM16Q9HAZ2 1276 aa15.5■□□□□ 0.07
GABPB1-202ENST00000359031 DDX20Q9UHI6 824 aaKnown RBP15.5■□□□□ 0.07
GABPB1-202ENST00000359031 XPO7Q9UIA9 1087 aaKnown RBP15.5■□□□□ 0.07
GABPB1-202ENST00000359031 ZMYND8Q9ULU4 1186 aaPredicted RBP15.5■□□□□ 0.07
GABPB1-202ENST00000359031 SEPT4O43236 478 aa15.49■□□□□ 0.07
GABPB1-202ENST00000359031 ZBED1O96006 694 aa15.49■□□□□ 0.07
GABPB1-202ENST00000359031 RARBP10826 455 aa15.49■□□□□ 0.07
GABPB1-202ENST00000359031 PTPN1P18031 435 aaKnown RBP15.49■□□□□ 0.07
GABPB1-202ENST00000359031 CYP2F1P24903 491 aa15.49■□□□□ 0.07
GABPB1-202ENST00000359031 GCAP28676 217 aa15.49■□□□□ 0.07
GABPB1-202ENST00000359031 MATKP42679 507 aa15.49■□□□□ 0.07
GABPB1-202ENST00000359031 XRCC4Q13426 336 aa15.49■□□□□ 0.07
GABPB1-202ENST00000359031 KCNJ11Q14654 390 aa15.49■□□□□ 0.07
GABPB1-202ENST00000359031 CA9Q16790 459 aa15.49■□□□□ 0.07
GABPB1-202ENST00000359031 KLHL38Q2WGJ6 581 aa15.49■□□□□ 0.07
GABPB1-202ENST00000359031 EFHC2Q5JST6 749 aa15.49■□□□□ 0.07
GABPB1-202ENST00000359031 CHRDL2Q6WN34 429 aa15.49■□□□□ 0.07
GABPB1-202ENST00000359031 PIGZQ86VD9 579 aa15.49■□□□□ 0.07
GABPB1-202ENST00000359031 ZC3H18Q86VM9 953 aaKnown RBP15.49■□□□□ 0.07
GABPB1-202ENST00000359031 CYP4X1Q8N118 509 aa15.49■□□□□ 0.07
GABPB1-202ENST00000359031 PYROXD1Q8WU10 500 aa15.49■□□□□ 0.07
GABPB1-202ENST00000359031 DYDC1Q8WWB3 177 aa15.49■□□□□ 0.07
GABPB1-202ENST00000359031 MAML1Q92585 1016 aa15.49■□□□□ 0.07
GABPB1-202ENST00000359031 NRDE2Q9H7Z3 1164 aa15.49■□□□□ 0.07
GABPB1-202ENST00000359031 RCOR3Q9P2K3 495 aaPredicted RBP15.49■□□□□ 0.07
GABPB1-202ENST00000359031 AP4E1Q9UPM8 1137 aa15.49■□□□□ 0.07
GABPB1-202ENST00000359031 GIT1Q9Y2X7 761 aa15.49■□□□□ 0.07
GABPB1-202ENST00000359031 CLUHO75153 1309 aa15.49■□□□□ 0.07
GABPB1-202ENST00000359031 GOLGA8MH3BSY2 632 aa15.48■□□□□ 0.07
GABPB1-202ENST00000359031 GPR182O15218 404 aa15.48■□□□□ 0.07
GABPB1-202ENST00000359031 THP07101 528 aa15.48■□□□□ 0.07
GABPB1-202ENST00000359031 TFE3P19532 575 aaPredicted RBP15.48■□□□□ 0.07
GABPB1-202ENST00000359031 L1CAMP32004 1257 aa15.48■□□□□ 0.07
GABPB1-202ENST00000359031 MLH1P40692 756 aa15.48■□□□□ 0.07
GABPB1-202ENST00000359031 NR2C2P49116 596 aa15.48■□□□□ 0.07
GABPB1-202ENST00000359031 ADCY1Q08828 1119 aa15.48■□□□□ 0.07
GABPB1-202ENST00000359031 ADIGQ0VDE8 80 aa15.48■□□□□ 0.07
GABPB1-202ENST00000359031 SLC25A52Q3SY17 297 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms