RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 TNCP24821 2201 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 PNMA8CA0A1B0GUJ8 204 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 EYA4O95677 639 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 CYP11B1P15538 503 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 PEX2P28328 305 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 HNRNPH3P31942 346 aaKnown RBP6.26□□□□□ -1.41
VPS13B-203ENST00000358544 SERPINH1P50454 418 aaKnown RBP6.26□□□□□ -1.41
VPS13B-203ENST00000358544 C11orf91Q3C1V1 193 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 CENPLQ8N0S6 344 aaPredicted RBP6.26□□□□□ -1.41
VPS13B-203ENST00000358544 PXDNLA1KZ92 1463 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 A0A087X0B3 334 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 ZSCAN9O15535 394 aaPredicted RBP6.26□□□□□ -1.41
VPS13B-203ENST00000358544 RALBP11234 206 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 C6orf52Q5T4I8 152 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 ABRAXAS1Q6UWZ7 409 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 ALYREFQ86V81 257 aaKnown RBP6.26□□□□□ -1.41
VPS13B-203ENST00000358544 CHKBQ9Y259 395 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 LRRC7Q96NW7 1537 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 TMEM247A6NEH6 219 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 PBX1P40424 430 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 TCP10Q12799 353 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 SMTNL2Q2TAL5 461 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 DENND5BQ6ZUT9 1274 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 RTL3Q8N8U3 475 aaKnown RBP6.26□□□□□ -1.41
VPS13B-203ENST00000358544 ARHGEF26Q96DR7 871 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 CEP170P1Q96L14 293 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 TRIM45Q9H8W5 580 aaPredicted RBP6.26□□□□□ -1.41
VPS13B-203ENST00000358544 RSAD1Q9HA92 442 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 PRG3Q9Y2Y8 225 aaPredicted RBP6.26□□□□□ -1.41
VPS13B-203ENST00000358544 GSG1L2A8MUP6 293 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 USP17L15C9J2P7 530 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 USP17L13C9JLJ4 530 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 USP17L11C9JVI0 530 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 USP17L18D6R9N7 530 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 USP17L22D6RA61 530 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 USP17L17D6RBQ6 530 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 USP17L19D6RCP7 530 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 USP17L20D6RJB6 530 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 SLCO1B7G3V0H7 640 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 CDK8P49336 464 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 MGAT5Q09328 741 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 USP17L24Q0WX57 530 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 ZYXQ15942 572 aaKnown RBP6.26□□□□□ -1.41
VPS13B-203ENST00000358544 SLC10A5Q5PT55 438 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 USP17L6PQ6QN14 398 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 LRRC8DQ7L1W4 858 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 ART4Q93070 314 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 BHMTQ93088 406 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 ZBTB1Q9Y2K1 713 aa6.26□□□□□ -1.41
VPS13B-203ENST00000358544 ADAMTS2O95450 1211 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 GCP02774 474 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 GNA15P30679 374 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 ABATP80404 500 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 SMU1Q2TAY7 513 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 TJAP1Q5JTD0 557 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 KYAT3Q6YP21 454 aaKnown RBP6.25□□□□□ -1.41
VPS13B-203ENST00000358544 SEPT12Q8IYM1 358 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 EFCAB3Q8N7B9 438 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 ZNF669Q96BR6 464 aaPredicted RBP6.25□□□□□ -1.41
VPS13B-203ENST00000358544 PLEKHA8Q96JA3 519 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 SLC25A23Q9BV35 468 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 FSD1LQ9BXM9 530 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 PCDH18Q9HCL0 1135 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 PLK2Q9NYY3 685 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 PLA2G4CQ9UP65 541 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 GINS2Q9Y248 185 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 KRT87PA6NCN2 255 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 MYBPC3Q14896 1274 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 DUPD1Q68J44 220 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 CDCA2Q69YH5 1023 aaPredicted RBP6.25□□□□□ -1.41
VPS13B-203ENST00000358544 SCARA3Q6AZY7 606 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 CCNJLQ8IV13 435 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 CCDC17Q96LX7 622 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 TMEM47Q9BQJ4 181 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 ZNF556Q9HAH1 456 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 DCP1AQ9NPI6 582 aaPredicted RBP6.25□□□□□ -1.41
VPS13B-203ENST00000358544 PMF1-BGLAPU3KQ54 211 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 PDLIM1O00151 329 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 NELFEP18615 380 aaKnown RBP6.25□□□□□ -1.41
VPS13B-203ENST00000358544 AQP4P55087 323 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 TP53BP2Q13625 1128 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 SPOCD1Q6ZMY3 1216 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 ZBTB46Q86UZ6 589 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 PGBD4Q96DM1 585 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 PHF12Q96QT6 1004 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 REEP2Q9BRK0 252 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 SPRTNQ9H040 489 aaPredicted RBP6.25□□□□□ -1.41
VPS13B-203ENST00000358544 SPATA2Q9UM82 520 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 VAPBO95292 243 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 EIF4BP23588 611 aaKnown RBP6.25□□□□□ -1.41
VPS13B-203ENST00000358544 NMT1P30419 496 aaKnown RBP6.25□□□□□ -1.41
VPS13B-203ENST00000358544 NAB1Q13506 487 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 ACVR2BQ13705 512 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 UBAP2LQ14157 1087 aaKnown RBP6.25□□□□□ -1.41
VPS13B-203ENST00000358544 KHDC1Q4VXA5 237 aaKnown RBP6.25□□□□□ -1.41
VPS13B-203ENST00000358544 ATAD3BQ5T9A4 648 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 DENND5AQ6IQ26 1287 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 LRRC55Q6ZSA7 311 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 B3GALT6Q96L58 329 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 TMEM109Q9BVC6 243 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms