RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 KPNA4O00629 521 aaPredicted RBP11.51□□□□□ -0.57
COL11A1-202ENST00000358392 SNUPNO95149 360 aaKnown RBP11.51□□□□□ -0.57
COL11A1-202ENST00000358392 PAX7P23759 505 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 ACAD10Q6JQN1 1059 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 CASP12Q6UXS9 341 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 MIB1Q86YT6 1006 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 SERAC1Q96JX3 654 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 NRDE2Q9H7Z3 1164 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 EPB41L4AQ9HCS5 686 aaPredicted RBP11.51□□□□□ -0.57
COL11A1-202ENST00000358392 RNF181Q9P0P0 153 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 TUBGCP4Q9UGJ1 667 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 FAM220BPB1ANY3 271 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 ANXA9O76027 345 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 HLA-DQA2P01906 255 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 KRT73Q86Y46 540 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 EID3Q8N140 333 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 PPP2R3CQ969Q6 453 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 MRPL48Q96GC5 212 aaKnown RBP11.51□□□□□ -0.57
COL11A1-202ENST00000358392 PPP1R2P1Q96PQ5 205 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 MOV10L1Q9BXT6 1211 aaKnown RBP11.51□□□□□ -0.57
COL11A1-202ENST00000358392 KCNH4Q9UQ05 1017 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 LOC100506127A0A0U1RQW1 187 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 CHURC1-FNTBB4DL54 471 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 LRG1P02750 347 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 UMPSP11172 480 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 TOMM20Q15388 145 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 NR6A1Q15406 480 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 ANKRD7Q92527 254 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 FRMD6Q96NE9 622 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 ZMYM5Q9UJ78 669 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 ZNF222Q9UK12 451 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 POLR1DQ9Y2S0 133 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 PSMD14O00487 310 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 EXTL3O43909 919 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 FDFT1P37268 417 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 CASP4P49662 377 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 ITGADQ13349 1161 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 ORC2Q13416 577 aaPredicted RBP11.51□□□□□ -0.57
COL11A1-202ENST00000358392 ACAP1Q15027 740 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 STILQ15468 1287 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 PGBD2Q6P3X8 592 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 CBWD2Q8IUF1 395 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 PPCSQ9HAB8 311 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 SIK3Q9Y2K2 1263 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 SH3GLB1Q9Y371 365 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 KBTBD13C9JR72 458 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 MTRF1O75570 445 aaKnown RBP11.5□□□□□ -0.57
COL11A1-202ENST00000358392 RAG1P15918 1043 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 SLC1A6P48664 564 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 TSNQ15631 228 aaKnown RBP11.5□□□□□ -0.57
COL11A1-202ENST00000358392 DNAJC14Q6Y2X3 702 aaPredicted RBP11.5□□□□□ -0.57
COL11A1-202ENST00000358392 STX12Q86Y82 276 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 MOSPD2Q8NHP6 518 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 CPB2Q96IY4 423 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 TOR4AQ9NXH8 423 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 GALNT8Q9NY28 637 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 DPP3Q9NY33 737 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 IL18RAPO95256 599 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 ZBTB7AO95365 584 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 ZNF37AP17032 561 aaPredicted RBP11.5□□□□□ -0.57
COL11A1-202ENST00000358392 GRK4P32298 578 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 PRAMEF18Q5VWM3 479 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 MRNIPQ6NTE8 343 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 CDC73Q6P1J9 531 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 SLC13A5Q86YT5 568 aaPredicted RBP11.5□□□□□ -0.57
COL11A1-202ENST00000358392 IPCEF1Q8WWN9 437 aaPredicted RBP11.5□□□□□ -0.57
COL11A1-202ENST00000358392 SLC9A7Q96T83 725 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 SSU72P8A0A1W2PR75 194 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 TSPAN19P0C672 248 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 ADSLP30566 484 aaPredicted RBP11.5□□□□□ -0.57
COL11A1-202ENST00000358392 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.5□□□□□ -0.57
COL11A1-202ENST00000358392 DGCR6Q14129 220 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 RNF44Q7L0R7 432 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 ELMO3Q96BJ8 720 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 PAFAH2Q99487 392 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 PCDHB2Q9Y5E7 798 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 H7C1W4 665 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 TSPAN3O60637 253 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 OR6B1O95007 311 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 TMEM253P0C7T8 217 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 MAPK1P28482 360 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 STIP1P31948 543 aaKnown RBP11.5□□□□□ -0.57
COL11A1-202ENST00000358392 GPR1P46091 355 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 TRAPPC11Q7Z392 1133 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 ARL10Q8N8L6 244 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 ATP6V0D2Q8N8Y2 350 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 TMBIM4Q9HC24 238 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 ERAP1Q9NZ08 941 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 DGAT1O75907 488 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 HK2P52789 917 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 GEMP55040 296 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 ADRM1Q16186 407 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 KBTBD2Q8IY47 623 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 CAMKK1Q8N5S9 505 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 LIMD1Q9UGP4 676 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 PRR12Q9ULL5 1215 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 PCDHGA3Q9Y5H0 932 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 HMGXB3Q12766 1538 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 DYRK3O43781 588 aa11.5□□□□□ -0.57
COL11A1-202ENST00000358392 SCARF1Q14162 830 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms