RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 ACTR2P61160 394 aa10.36□□□□□ -0.75
RNF40-202ENST00000357890 TGFB2P61812 414 aa10.36□□□□□ -0.75
RNF40-202ENST00000357890 TBL3Q12788 808 aaKnown RBP10.36□□□□□ -0.75
RNF40-202ENST00000357890 EMC2Q15006 297 aa10.36□□□□□ -0.75
RNF40-202ENST00000357890 C1orf220Q5T0J3 134 aa10.36□□□□□ -0.75
RNF40-202ENST00000357890 CGB2Q6NT52 195 aa10.36□□□□□ -0.75
RNF40-202ENST00000357890 PCGF5Q86SE9 256 aa10.36□□□□□ -0.75
RNF40-202ENST00000357890 DHDDSQ86SQ9 333 aa10.36□□□□□ -0.75
RNF40-202ENST00000357890 HOMEZQ8IX15 550 aa10.36□□□□□ -0.75
RNF40-202ENST00000357890 ZNF606Q8WXB4 792 aa10.36□□□□□ -0.75
RNF40-202ENST00000357890 CASP10Q92851 521 aa10.36□□□□□ -0.75
RNF40-202ENST00000357890 MECRQ9BV79 373 aa10.36□□□□□ -0.75
RNF40-202ENST00000357890 NDEL1Q9GZM8 345 aa10.36□□□□□ -0.75
RNF40-202ENST00000357890 SPON1Q9HCB6 807 aa10.36□□□□□ -0.75
RNF40-202ENST00000357890 ZNF302Q9NR11 478 aa10.36□□□□□ -0.75
RNF40-202ENST00000357890 AAASQ9NRG9 546 aa10.36□□□□□ -0.75
RNF40-202ENST00000357890 XPO7Q9UIA9 1087 aaKnown RBP10.36□□□□□ -0.75
RNF40-202ENST00000357890 MROH7Q68CQ1 1323 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 MAP3K6O95382 1288 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 ASMTLO95671 621 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 MTTPP55157 894 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 EIF3EP60228 445 aaKnown RBP10.35□□□□□ -0.75
RNF40-202ENST00000357890 FOLH1Q04609 750 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 ZBTB17Q13105 803 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 ART3Q13508 389 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 BMPR2Q13873 1038 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 ANKRD20A4Q4UJ75 823 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 TFDP3Q5H9I0 405 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 ENDOVQ8N8Q3 282 aaKnown RBP10.35□□□□□ -0.75
RNF40-202ENST00000357890 C12orf50Q8NA57 414 aaPredicted RBP10.35□□□□□ -0.75
RNF40-202ENST00000357890 FBXO36Q8NEA4 188 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 PSPC1Q8WXF1 523 aaKnown RBP10.35□□□□□ -0.75
RNF40-202ENST00000357890 CD101Q93033 1021 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 ATP2A3Q93084 1043 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 LIN28AQ9H9Z2 209 aaKnown RBP10.35□□□□□ -0.75
RNF40-202ENST00000357890 CYLDQ9NQC7 956 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 SELENONQ9NZV5 590 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 SMIM31A0A1B0GVY4 71 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 ADCY6O43306 1168 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 FKBP6O75344 327 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 ASLP04424 464 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 RBP3P10745 1247 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 DSG3P32926 999 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 RPL5P46777 297 aaKnown RBP10.35□□□□□ -0.75
RNF40-202ENST00000357890 COPAP53621 1224 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 STX3Q13277 289 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 ZNF699Q32M78 642 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 SPOCD1Q6ZMY3 1216 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 DENND5BQ6ZUT9 1274 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 VSIG10LQ86VR7 867 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 SREK1Q8WXA9 508 aaKnown RBP10.35□□□□□ -0.75
RNF40-202ENST00000357890 UPF1Q92900 1129 aaKnown RBP eCLIP10.35□□□□□ -0.752e-8■■■■□ 25.7
RNF40-202ENST00000357890 HAUS8Q9BT25 410 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 ADA2Q9NZK5 511 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 GINS2Q9Y248 185 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 KAT6AQ92794 2004 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 MYH11P35749 1972 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 ZNF536O15090 1300 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 GJA8P48165 433 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 YWHAEP62258 255 aaKnown RBP10.35□□□□□ -0.75
RNF40-202ENST00000357890 DLG1Q12959 904 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 ORC1Q13415 861 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 MORF4L2Q15014 288 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 STXBP2Q15833 593 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 FOXB2Q5VYV0 432 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 CDR2LQ86X02 465 aaPredicted RBP10.35□□□□□ -0.75
RNF40-202ENST00000357890 ZBTB8OSQ8IWT0 167 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 EMC1Q8N766 993 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 TTC13Q8NBP0 860 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 FERMT1Q9BQL6 677 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 ACAD9Q9H845 621 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 NGRNQ9NPE2 291 aaKnown RBP10.35□□□□□ -0.75
RNF40-202ENST00000357890 SMYD2Q9NRG4 433 aa10.35□□□□□ -0.75
RNF40-202ENST00000357890 ADGRA3Q8IWK6 1321 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 PRR5-ARHGAP8B1AHC4 643 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 OAS1P00973 400 aaKnown RBP10.34□□□□□ -0.75
RNF40-202ENST00000357890 S100BP04271 92 aaPredicted RBP10.34□□□□□ -0.75
RNF40-202ENST00000357890 KRT7P08729 469 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 ARHGAP8P85298 464 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 CXCL9Q07325 125 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 PPP6R3Q5H9R7 873 aaPredicted RBP10.34□□□□□ -0.75
RNF40-202ENST00000357890 MROH9Q5TGP6 573 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 KBTBD2Q8IY47 623 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 KATNAL2Q8IYT4 538 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 SPATA18Q8TC71 538 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 BSNDQ8WZ55 320 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 LZICQ8WZA0 190 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 PHF24Q9UPV7 400 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 VWA5AO00534 786 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 LIASO43766 372 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 C6orf222P0C671 652 aaPredicted RBP10.34□□□□□ -0.75
RNF40-202ENST00000357890 T-ENOLP0DO92 83 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 HMGCS2P54868 508 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 HDAC4P56524 1084 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 PEX6Q13608 980 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 PIGHQ14442 188 aaPredicted RBP10.34□□□□□ -0.75
RNF40-202ENST00000357890 NRF1Q16656 503 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 ITPRIPL1Q6GPH6 555 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 GLIS1Q8NBF1 620 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 ATXN7L3BQ96GX2 97 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms