RNA–Protein interactions for RNA: ENST00000357867.8

FN1-205, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-205ENST00000357867 FAM47EQ6ZV65 393 aa11.34□□□□□ -0.59
FN1-205ENST00000357867 TRMT11Q7Z4G4 463 aaKnown RBP11.34□□□□□ -0.59
FN1-205ENST00000357867 XRN1Q8IZH2 1706 aaKnown RBP11.34□□□□□ -0.59
FN1-205ENST00000357867 FBXO22Q8NEZ5 403 aa11.34□□□□□ -0.59
FN1-205ENST00000357867 MRPL48Q96GC5 212 aaKnown RBP11.34□□□□□ -0.59
FN1-205ENST00000357867 SLC28A3Q9HAS3 691 aa11.34□□□□□ -0.59
FN1-205ENST00000357867 EIF3LQ9Y262 564 aaKnown RBP11.34□□□□□ -0.59
FN1-205ENST00000357867 CCDC189A1A4V9 331 aa11.34□□□□□ -0.59
FN1-205ENST00000357867 ENDOD1O94919 500 aa11.34□□□□□ -0.59
FN1-205ENST00000357867 GLP2RO95838 553 aa11.34□□□□□ -0.59
FN1-205ENST00000357867 GTF2E2P29084 291 aaKnown RBP11.34□□□□□ -0.59
FN1-205ENST00000357867 DGKZQ13574 1117 aa11.34□□□□□ -0.59
FN1-205ENST00000357867 RD3Q7Z3Z2 195 aa11.34□□□□□ -0.59
FN1-205ENST00000357867 DIS3LQ8TF46 1054 aaKnown RBP11.34□□□□□ -0.59
FN1-205ENST00000357867 ZNF669Q96BR6 464 aaPredicted RBP11.34□□□□□ -0.59
FN1-205ENST00000357867 ZNF510Q9Y2H8 683 aa11.34□□□□□ -0.59
FN1-205ENST00000357867 SLC39A12Q504Y0 691 aa11.34□□□□□ -0.59
FN1-205ENST00000357867 TRIML2Q8N7C3 387 aa11.34□□□□□ -0.59
FN1-205ENST00000357867 FAM71DQ8N9W8 422 aa11.34□□□□□ -0.59
FN1-205ENST00000357867 PNKPQ96T60 521 aa11.34□□□□□ -0.59
FN1-205ENST00000357867 CORO1BQ9BR76 489 aa11.34□□□□□ -0.59
FN1-205ENST00000357867 PDCD2LQ9BRP1 358 aa11.34□□□□□ -0.59
FN1-205ENST00000357867 RANBP17Q9H2T7 1088 aaKnown RBP11.34□□□□□ -0.59
FN1-205ENST00000357867 RPRD1BQ9NQG5 326 aaKnown RBP11.34□□□□□ -0.59
FN1-205ENST00000357867 MGAT4DA6NG13 374 aa11.34□□□□□ -0.59
FN1-205ENST00000357867 MEI4A8MW99 385 aa11.34□□□□□ -0.59
FN1-205ENST00000357867 OPLAHO14841 1288 aa11.34□□□□□ -0.59
FN1-205ENST00000357867 TIMM44O43615 452 aa11.34□□□□□ -0.59
FN1-205ENST00000357867 PLA2G6O60733 806 aa11.34□□□□□ -0.59
FN1-205ENST00000357867 RECQL4O94761 1208 aa11.34□□□□□ -0.59
FN1-205ENST00000357867 SNRPAP09012 282 aaKnown RBP11.34□□□□□ -0.59
FN1-205ENST00000357867 PCNAP12004 261 aa11.34□□□□□ -0.59
FN1-205ENST00000357867 RAP1GAPP47736 663 aa11.34□□□□□ -0.59
FN1-205ENST00000357867 ZNF135P52742 658 aaPredicted RBP11.34□□□□□ -0.59
FN1-205ENST00000357867 CNTN2Q02246 1040 aa11.34□□□□□ -0.59
FN1-205ENST00000357867 FAM172AQ8WUF8 416 aa11.34□□□□□ -0.59
FN1-205ENST00000357867 FAM162AQ96A26 154 aa11.34□□□□□ -0.59
FN1-205ENST00000357867 ZFYVE19Q96K21 471 aa11.34□□□□□ -0.59
FN1-205ENST00000357867 MPP6Q9NZW5 540 aa11.34□□□□□ -0.59
FN1-205ENST00000357867 SLIT3O75094 1523 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 TEX33O43247 280 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 MED24O75448 989 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 LGALS2P05162 132 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 PRKAR2AP13861 404 aaKnown RBP11.33□□□□□ -0.6
FN1-205ENST00000357867 SERPINB4P48594 390 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 MARC1Q5VT66 337 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 ZNF720Q7Z2F6 126 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 RFWD2Q8NHY2 731 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 FAM163AQ96GL9 167 aaPredicted RBP11.33□□□□□ -0.6
FN1-205ENST00000357867 TSPAN18Q96SJ8 248 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 KCTD10Q9H3F6 313 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 TLE6Q9H808 572 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 MIEF1Q9NQG6 463 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 ABCC13Q9NSE7 274 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 ACKR2O00590 384 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 FGFR4P22455 802 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 SKOR1P84550 965 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 PTK7Q13308 1070 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 TMEM159Q96B96 161 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 FAM167BQ9BTA0 163 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 CCDC90BQ9GZT6 254 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 TRABDQ9H4I3 376 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 SAE1Q9UBE0 346 aaPredicted RBP11.33□□□□□ -0.6
FN1-205ENST00000357867 RPS6KB2Q9UBS0 482 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 C1QTNF3-AMACRE9PGA6 284 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 PTPN11Q06124 597 aaPredicted RBP11.33□□□□□ -0.6
FN1-205ENST00000357867 CDC16Q13042 620 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 ANKRD23Q86SG2 305 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 ST13P4Q8IZP2 240 aaPredicted RBP11.33□□□□□ -0.6
FN1-205ENST00000357867 ZNF655Q8N720 491 aaPredicted RBP11.33□□□□□ -0.6
FN1-205ENST00000357867 TMC2Q8TDI7 906 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 TMA16Q96EY4 203 aaKnown RBP11.33□□□□□ -0.6
FN1-205ENST00000357867 C2orf49Q9BVC5 232 aaPredicted RBP11.33□□□□□ -0.6
FN1-205ENST00000357867 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.33□□□□□ -0.68e-6■□□□□ 10.8
FN1-205ENST00000357867 POLR2AP24928 1970 aaKnown RBP11.33□□□□□ -0.6
FN1-205ENST00000357867 TBC1D4O60343 1298 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 PTPN7P35236 360 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 SCNN1BP51168 640 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 BCL2L1Q07817 233 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 APOBEC3HQ6NTF7 200 aaKnown RBP11.33□□□□□ -0.6
FN1-205ENST00000357867 A0A1B0GTH6 734 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 GLTPD2A6NH11 291 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 SDR42E2A6NKP2 422 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 GOLGA8RI6L899 631 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 KPNA3O00505 521 aaPredicted RBP11.33□□□□□ -0.6
FN1-205ENST00000357867 NCK2O43639 380 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 TOMM70O94826 608 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 COMTP21964 271 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 PON1P27169 355 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 SNRPD1P62314 119 aaKnown RBP11.33□□□□□ -0.6
FN1-205ENST00000357867 STX3Q13277 289 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 C16orf89Q6UX73 402 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 SUGP1Q8IWZ8 645 aaKnown RBP11.33□□□□□ -0.6
FN1-205ENST00000357867 SYTL1Q8IYJ3 562 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 NUP93Q8N1F7 819 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 CMTM5Q96DZ9 223 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 MAGEB10Q96LZ2 347 aaPredicted RBP11.33□□□□□ -0.6
FN1-205ENST00000357867 RPS6KL1Q9Y6S9 549 aa11.33□□□□□ -0.6
FN1-205ENST00000357867 EIF4E1BA6NMX2 242 aaKnown RBP11.33□□□□□ -0.6
FN1-205ENST00000357867 FKBP9O95302 570 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms