RNA–Protein interactions for RNA: ENST00000357395.7

SYNE2-203, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 21,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-203ENST00000357395 KCNF1Q9H3M0 494 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 TMEM165Q9HC07 324 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 ADAM28Q9UKQ2 775 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 GRIN2AQ12879 1464 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 TSTD3H0UI37 97 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 RALGDSQ12967 914 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 TIGD7Q6NT04 549 aaPredicted RBP4.8□□□□□ -1.64
SYNE2-203ENST00000357395 ARL8AQ96BM9 186 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 RNFT2Q96EX2 444 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 PLEKHG4BQ96PX9 1271 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 HHATLQ9HCP6 504 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 KIAA0586Q9BVV6 1533 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 AGRPO00253 132 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 MNDAP41218 407 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 ZNF45Q02386 682 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 ZBED5Q49AG3 693 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 NCCRP1Q6ZVX7 275 aaPredicted RBP4.8□□□□□ -1.64
SYNE2-203ENST00000357395 C9orf43Q8TAL5 461 aaPredicted RBP4.8□□□□□ -1.64
SYNE2-203ENST00000357395 TEFMQ96QE5 360 aaKnown RBP4.8□□□□□ -1.64
SYNE2-203ENST00000357395 TMEM109Q9BVC6 243 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 CDH9Q9ULB4 789 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 TRIM64CA6NLI5 447 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 ERI2A8K979 691 aaKnown RBP4.8□□□□□ -1.64
SYNE2-203ENST00000357395 NPPAP01160 153 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 ERBB2P04626 1255 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 SLC9A3P48764 834 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 PYHIN1Q6K0P9 492 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 SPRTNQ9H040 489 aaPredicted RBP4.8□□□□□ -1.64
SYNE2-203ENST00000357395 PCDHGA11Q9Y5H2 935 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 SNX3O60493 162 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 DNAJC6O75061 913 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 PTTG1O95997 202 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 RBP1P09455 135 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 MLECQ14165 292 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 PRPF39Q86UA1 669 aaKnown RBP4.8□□□□□ -1.64
SYNE2-203ENST00000357395 RASAL3Q86YV0 1011 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 ADPGKQ9BRR6 497 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 RAD18Q9NS91 495 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 ST3GAL5Q9UNP4 418 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 LOC100653049A0A140TA62 436 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 ANPEPP15144 967 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 NOS1P29475 1434 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 GRHL2Q6ISB3 625 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 SLC44A2Q8IWA5 706 aaPredicted RBP4.8□□□□□ -1.64
SYNE2-203ENST00000357395 MCPH1Q8NEM0 835 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 OTUD7AQ8TE49 926 aaPredicted RBP4.8□□□□□ -1.64
SYNE2-203ENST00000357395 RAD54LQ92698 747 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 SLC22A4Q9H015 551 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 H2AFY2Q9P0M6 372 aaPredicted RBP4.8□□□□□ -1.64
SYNE2-203ENST00000357395 INPP5FQ9Y2H2 1132 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 DLATP10515 647 aaKnown RBP4.8□□□□□ -1.64
SYNE2-203ENST00000357395 GCLMP48507 274 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 CXXC5Q7LFL8 322 aaKnown RBP4.8□□□□□ -1.64
SYNE2-203ENST00000357395 DNAAF3Q8N9W5 541 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 ADPRHL2Q9NX46 363 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 ERGIC3Q9Y282 383 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 MAN2B2Q9Y2E5 1009 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 GCNT3O95395 438 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 SPRP35270 261 aaPredicted RBP4.8□□□□□ -1.64
SYNE2-203ENST00000357395 SLC26A11Q86WA9 606 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 TBC1D21Q8IYX1 336 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 SNX7Q9UNH6 387 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 MYO18AQ92614 2054 aaKnown RBP4.8□□□□□ -1.64
SYNE2-203ENST00000357395 KCNN4O15554 427 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 SEC24AO95486 1093 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 CFL1P23528 166 aaKnown RBP4.8□□□□□ -1.64
SYNE2-203ENST00000357395 HSD17B3P37058 310 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 CERS2Q96G23 380 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 KLHL32Q96NJ5 620 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 MYD88Q99836 296 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 ARMC1Q9NVT9 282 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 NR2E1Q9Y466 385 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 ZNF518AQ6AHZ1 1483 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 LSM8O95777 96 aaKnown RBP4.8□□□□□ -1.64
SYNE2-203ENST00000357395 MMP1P03956 469 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 ZNF806P0C7X5 589 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 SOX5P35711 763 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 PTENP60484 403 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 PAMR1Q6UXH9 720 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 RPS6KA6Q9UK32 745 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 ACSL5Q9ULC5 683 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 NR2E3Q9Y5X4 410 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 RUSC2Q8N2Y8 1516 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 AFF2P51816 1311 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 PRKD3O94806 890 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 ASMTLO95671 621 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 MAB21L1Q13394 359 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 U2AF1L4Q8WU68 220 aaKnown RBP4.8□□□□□ -1.64
SYNE2-203ENST00000357395 ANKS1AQ92625 1134 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 MRRFQ96E11 262 aaKnown RBP4.8□□□□□ -1.64
SYNE2-203ENST00000357395 NARS2Q96I59 477 aaKnown RBP4.8□□□□□ -1.64
SYNE2-203ENST00000357395 A2ML1A8K2U0 1454 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 CHL1O00533 1208 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 NR3C2P08235 984 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 ATP1A3P13637 1013 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 ROR1Q01973 937 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 STXBP2Q15833 593 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 NFIL3Q16649 462 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 FAM173BQ6P4H8 233 aa4.8□□□□□ -1.64
SYNE2-203ENST00000357395 TIPARPQ7Z3E1 657 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms