RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 FAM192AQ9GZU8 254 aa15.28■□□□□ 0.04
CHD4-201ENST00000357008 NINJ2Q9NZG7 142 aa15.28■□□□□ 0.04
CHD4-201ENST00000357008 CTSHP09668 335 aa15.28■□□□□ 0.04
CHD4-201ENST00000357008 MGAT5BQ3V5L5 792 aa15.28■□□□□ 0.04
CHD4-201ENST00000357008 YTHDF3Q7Z739 585 aaKnown RBP15.28■□□□□ 0.04
CHD4-201ENST00000357008 MCOLN2Q8IZK6 566 aa15.28■□□□□ 0.04
CHD4-201ENST00000357008 ABRAQ8N0Z2 381 aa15.28■□□□□ 0.04
CHD4-201ENST00000357008 TMEM237Q96Q45 408 aa15.28■□□□□ 0.04
CHD4-201ENST00000357008 VTI1BQ9UEU0 232 aa15.28■□□□□ 0.04
CHD4-201ENST00000357008 MAGEB16A2A368 324 aa15.28■□□□□ 0.04
CHD4-201ENST00000357008 TCF7P36402 384 aaPredicted RBP15.28■□□□□ 0.04
CHD4-201ENST00000357008 PPIDQ08752 370 aaKnown RBP15.28■□□□□ 0.04
CHD4-201ENST00000357008 C10orf120Q5SQS8 335 aa15.28■□□□□ 0.04
CHD4-201ENST00000357008 GPAMQ9HCL2 828 aa15.28■□□□□ 0.04
CHD4-201ENST00000357008 C4BPBP20851 252 aa15.28■□□□□ 0.04
CHD4-201ENST00000357008 ALDH5A1P51649 535 aaPredicted RBP15.28■□□□□ 0.04
CHD4-201ENST00000357008 PRKAA2P54646 552 aa15.28■□□□□ 0.04
CHD4-201ENST00000357008 CNTN1Q12860 1018 aa15.28■□□□□ 0.04
CHD4-201ENST00000357008 MEA1Q16626 185 aa15.28■□□□□ 0.04
CHD4-201ENST00000357008 DGKDQ16760 1214 aa15.28■□□□□ 0.04
CHD4-201ENST00000357008 N4BP2L1Q5TBK1 243 aaPredicted RBP15.28■□□□□ 0.04
CHD4-201ENST00000357008 MYLK2Q9H1R3 596 aa15.28■□□□□ 0.04
CHD4-201ENST00000357008 GANQ9H2C0 597 aa15.28■□□□□ 0.04
CHD4-201ENST00000357008 PCDHA3Q9Y5H8 950 aa15.28■□□□□ 0.04
CHD4-201ENST00000357008 PDZK1P1A8MUH7 402 aa15.28■□□□□ 0.04
CHD4-201ENST00000357008 ELK3P41970 407 aa15.28■□□□□ 0.04
CHD4-201ENST00000357008 PRMT9Q6P2P2 845 aa15.28■□□□□ 0.04
CHD4-201ENST00000357008 GLB1LQ6UWU2 654 aa15.28■□□□□ 0.04
CHD4-201ENST00000357008 MPZL3Q6UWV2 235 aa15.28■□□□□ 0.04
CHD4-201ENST00000357008 MAGED4Q96JG8 741 aa15.28■□□□□ 0.04
CHD4-201ENST00000357008 PPP1R10Q96QC0 940 aaKnown RBP15.28■□□□□ 0.04
CHD4-201ENST00000357008 ELP3Q9H9T3 547 aa15.28■□□□□ 0.04
CHD4-201ENST00000357008 FOXR1Q6PIV2 292 aa15.27■□□□□ 0.04
CHD4-201ENST00000357008 ACOT1Q86TX2 421 aa15.27■□□□□ 0.04
CHD4-201ENST00000357008 NT5DC3Q86UY8 548 aa15.27■□□□□ 0.04
CHD4-201ENST00000357008 KCTD14Q9BQ13 255 aaPredicted RBP15.27■□□□□ 0.04
CHD4-201ENST00000357008 ELF3P78545 371 aaPredicted RBP15.27■□□□□ 0.04
CHD4-201ENST00000357008 OSCP1Q8WVF1 389 aa15.27■□□□□ 0.04
CHD4-201ENST00000357008 POP1Q99575 1024 aaKnown RBP15.27■□□□□ 0.04
CHD4-201ENST00000357008 CISHQ9NSE2 258 aa15.27■□□□□ 0.04
CHD4-201ENST00000357008 BTBD7Q9P203 1132 aa15.27■□□□□ 0.04
CHD4-201ENST00000357008 HOXD10P28358 340 aa15.27■□□□□ 0.04
CHD4-201ENST00000357008 ANXA11P50995 505 aaKnown RBP15.27■□□□□ 0.04
CHD4-201ENST00000357008 BCAT1P54687 386 aa15.27■□□□□ 0.04
CHD4-201ENST00000357008 NCF4Q15080 339 aa15.27■□□□□ 0.04
CHD4-201ENST00000357008 SV2AQ7L0J3 742 aa15.27■□□□□ 0.04
CHD4-201ENST00000357008 ZNF75CPQ92670 426 aaPredicted RBP15.27■□□□□ 0.04
CHD4-201ENST00000357008 CENPTQ96BT3 561 aa15.27■□□□□ 0.04
CHD4-201ENST00000357008 PRDM5Q9NQX1 630 aaPredicted RBP15.27■□□□□ 0.04
CHD4-201ENST00000357008 KRT84Q9NSB2 600 aa15.27■□□□□ 0.04
CHD4-201ENST00000357008 COMMD8Q9NX08 183 aa15.27■□□□□ 0.04
CHD4-201ENST00000357008 ZMYND8Q9ULU4 1186 aaPredicted RBP15.27■□□□□ 0.04
CHD4-201ENST00000357008 MROH7Q68CQ1 1323 aa15.27■□□□□ 0.04
CHD4-201ENST00000357008 ACO1P21399 889 aaKnown RBP15.27■□□□□ 0.03
CHD4-201ENST00000357008 KRT20P35900 424 aa15.27■□□□□ 0.03
CHD4-201ENST00000357008 ORC1Q13415 861 aa15.27■□□□□ 0.03
CHD4-201ENST00000357008 PKN1Q16512 942 aa15.27■□□□□ 0.03
CHD4-201ENST00000357008 WDR49Q8IV35 697 aa15.27■□□□□ 0.03
CHD4-201ENST00000357008 RXFP2Q8WXD0 754 aa15.27■□□□□ 0.03
CHD4-201ENST00000357008 ZFP42Q96MM3 310 aa15.27■□□□□ 0.03
CHD4-201ENST00000357008 ZCCHC11Q5TAX3 1644 aaKnown RBP15.27■□□□□ 0.03
CHD4-201ENST00000357008 AP1G2O75843 785 aa15.27■□□□□ 0.03
CHD4-201ENST00000357008 TPBGLP0DKB5 382 aa15.27■□□□□ 0.03
CHD4-201ENST00000357008 RARAP10276 462 aa15.27■□□□□ 0.03
CHD4-201ENST00000357008 ALOX15P16050 662 aaPredicted RBP15.27■□□□□ 0.03
CHD4-201ENST00000357008 TRAF2Q12933 501 aa15.27■□□□□ 0.03
CHD4-201ENST00000357008 ITGA9Q13797 1035 aa15.27■□□□□ 0.03
CHD4-201ENST00000357008 CSHL1Q14406 222 aa15.27■□□□□ 0.03
CHD4-201ENST00000357008 PKN2Q16513 984 aaKnown RBP15.27■□□□□ 0.03
CHD4-201ENST00000357008 BDH2Q9BUT1 245 aa15.27■□□□□ 0.03
CHD4-201ENST00000357008 CYP3A43Q9HB55 503 aa15.27■□□□□ 0.03
CHD4-201ENST00000357008 DIABLOQ9NR28 239 aa15.27■□□□□ 0.03
CHD4-201ENST00000357008 FAM205AQ6ZU69 1335 aa15.27■□□□□ 0.03
CHD4-201ENST00000357008 SRRM3A6NNA2 597 aaPredicted RBP15.26■□□□□ 0.03
CHD4-201ENST00000357008 ARHGAP22Q7Z5H3 698 aa15.26■□□□□ 0.03
CHD4-201ENST00000357008 COLGALT1Q8NBJ5 622 aa15.26■□□□□ 0.03
CHD4-201ENST00000357008 ZNF184Q99676 751 aaPredicted RBP15.26■□□□□ 0.03
CHD4-201ENST00000357008 NRDE2Q9H7Z3 1164 aa15.26■□□□□ 0.03
CHD4-201ENST00000357008 HPS4Q9NQG7 708 aa15.26■□□□□ 0.03
CHD4-201ENST00000357008 CROTQ9UKG9 612 aa15.26■□□□□ 0.03
CHD4-201ENST00000357008 PNMA8BQ9ULN7 279 aaPredicted RBP15.26■□□□□ 0.03
CHD4-201ENST00000357008 SESN1Q9Y6P5 492 aa15.26■□□□□ 0.03
CHD4-201ENST00000357008 KPNA4O00629 521 aaPredicted RBP15.26■□□□□ 0.03
CHD4-201ENST00000357008 NCAM2O15394 837 aa15.26■□□□□ 0.03
CHD4-201ENST00000357008 TRIM13O60858 407 aa15.26■□□□□ 0.03
CHD4-201ENST00000357008 RAG1P15918 1043 aa15.26■□□□□ 0.03
CHD4-201ENST00000357008 GP5P40197 560 aa15.26■□□□□ 0.03
CHD4-201ENST00000357008 CDK16Q00536 496 aa15.26■□□□□ 0.03
CHD4-201ENST00000357008 MICALL2Q8IY33 904 aa15.26■□□□□ 0.03
CHD4-201ENST00000357008 TSEN2Q8NCE0 465 aaKnown RBP15.26■□□□□ 0.03
CHD4-201ENST00000357008 MIEF2Q96C03 454 aa15.26■□□□□ 0.03
CHD4-201ENST00000357008 ATG4CQ96DT6 458 aa15.26■□□□□ 0.03
CHD4-201ENST00000357008 VCPIP1Q96JH7 1222 aa15.26■□□□□ 0.03
CHD4-201ENST00000357008 SRPK1Q96SB4 655 aaKnown RBP15.26■□□□□ 0.03
CHD4-201ENST00000357008 MYRFQ9Y2G1 1151 aa15.26■□□□□ 0.03
CHD4-201ENST00000357008 NCF1BA6NI72 391 aaPredicted RBP15.26■□□□□ 0.03
CHD4-201ENST00000357008 NCF1CA8MVU1 366 aaPredicted RBP15.26■□□□□ 0.03
CHD4-201ENST00000357008 ALADP13716 330 aa15.26■□□□□ 0.03
CHD4-201ENST00000357008 NCF1P14598 390 aaPredicted RBP15.26■□□□□ 0.03
CHD4-201ENST00000357008 PECAM1P16284 738 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms