RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 RFC1P35251 1148 aaPredicted RBP12.99□□□□□ -0.33
BDNF-202ENST00000356660 GARSP41250 739 aaKnown RBP12.99□□□□□ -0.33
BDNF-202ENST00000356660 IREB2P48200 963 aaKnown RBP12.99□□□□□ -0.33
BDNF-202ENST00000356660 AQP4P55087 323 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 GDF10P55107 478 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 TPD52P55327 224 aaPredicted RBP12.99□□□□□ -0.33
BDNF-202ENST00000356660 TKFCQ3LXA3 575 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 KCTD21Q4G0X4 260 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 RNASEH2BQ5TBB1 312 aaKnown RBP12.99□□□□□ -0.33
BDNF-202ENST00000356660 RSBN1LQ6PCB5 846 aaPredicted RBP12.99□□□□□ -0.33
BDNF-202ENST00000356660 GET4Q7L5D6 327 aaPredicted RBP12.99□□□□□ -0.33
BDNF-202ENST00000356660 ANKS1BQ7Z6G8 1248 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 TMC2Q8TDI7 906 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 CPT1BQ92523 772 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 LZTS1Q9Y250 596 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 CSDE1O75534 798 aaKnown RBP12.99□□□□□ -0.33
BDNF-202ENST00000356660 LDHAP00338 332 aaKnown RBP12.99□□□□□ -0.33
BDNF-202ENST00000356660 PDGFRAP16234 1089 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 ITGB5P18084 799 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 VCLP18206 1134 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 GJA8P48165 433 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 RGS7P49802 495 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 CCNG1P51959 295 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 NOMO3P69849 1222 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 PPIDQ08752 370 aaKnown RBP12.99□□□□□ -0.33
BDNF-202ENST00000356660 GRAMD4Q6IC98 578 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 APOBEC3HQ6NTF7 200 aaKnown RBP12.99□□□□□ -0.33
BDNF-202ENST00000356660 ANKLE1Q8NAG6 615 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 C17orf50Q8WW18 174 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 SLCO2A1Q92959 643 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 EBF4Q9BQW3 602 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 CYP26B1Q9NR63 512 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 ASNSD1Q9NWL6 643 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 ARHGAP26Q9UNA1 814 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 AFG3L2Q9Y4W6 797 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 ATP8B3O60423 1300 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 A0A0B4J269 797 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 GIPC1O14908 333 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 CHN2P52757 468 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 MSS51Q4VC12 460 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 PDPK2PQ6A1A2 396 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 ZBTB46Q86UZ6 589 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 HPS6Q86YV9 775 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 HACE1Q8IYU2 909 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 DENND1AQ8TEH3 1009 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 NAT14Q8WUY8 206 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 SPATA33Q96N06 139 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 COPS7BQ9H9Q2 264 aaPredicted RBP12.98□□□□□ -0.33
BDNF-202ENST00000356660 PFDN4Q9NQP4 134 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 IGLV3-22A0A075B6J6 115 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 hCG_1818297A0A087WSY0 165 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 DPEP1P16444 411 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 ARL4AP40617 200 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 NCKAP1LP55160 1127 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 PKNOX1P55347 436 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 GPX6P59796 221 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 FOLH1Q04609 750 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 C1QBPQ07021 282 aaKnown RBP12.98□□□□□ -0.33
BDNF-202ENST00000356660 SFSWAPQ12872 951 aaKnown RBP12.98□□□□□ -0.33
BDNF-202ENST00000356660 ITGA9Q13797 1035 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 DPYSL3Q14195 570 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 IL31RAQ8NI17 732 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 FBXO27Q8NI29 283 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 MKL1Q969V6 931 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 AGAP3Q96P47 875 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 MMP19Q99542 508 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 DCUN1D5Q9BTE7 237 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 TCRBV7S3A2A0A539 114 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.98□□□□□ -0.33
BDNF-202ENST00000356660 MAGEB2O15479 319 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 MED7O43513 233 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 EXTL3O43909 919 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 SOX11P35716 441 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 GTF2BQ00403 316 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 TMEM62Q0P6H9 643 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 EML3Q32P44 896 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 TMEM63BQ5T3F8 832 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 OR52E8Q6IFG1 317 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 TMEM110Q86TL2 294 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 TREML1Q86YW5 311 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 BANPQ8N9N5 519 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 PHC3Q8NDX5 983 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 UBA3Q8TBC4 463 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 PLEKHG4BQ96PX9 1271 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 PANX3Q96QZ0 392 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 SYT11Q9BT88 431 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 TEX13BQ9BXU2 312 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 C20orf96Q9NUD7 363 aaPredicted RBP12.98□□□□□ -0.33
BDNF-202ENST00000356660 FBXO40Q9UH90 709 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 ZNF232Q9UNY5 417 aa12.98□□□□□ -0.33
BDNF-202ENST00000356660 TYROBPO43914 113 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 EEF1B2P24534 225 aaKnown RBP12.97□□□□□ -0.33
BDNF-202ENST00000356660 MMRN1Q13201 1228 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 SPOUT1Q5T280 376 aaKnown RBP12.97□□□□□ -0.33
BDNF-202ENST00000356660 N4BP2L1Q5TBK1 243 aaPredicted RBP12.97□□□□□ -0.33
BDNF-202ENST00000356660 ADGRD1Q6QNK2 874 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 TRIM67Q6ZTA4 783 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 TDRPQ86YL5 185 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 ZFAND2BQ8WV99 257 aa12.97□□□□□ -0.33
BDNF-202ENST00000356660 GMCL1Q96IK5 515 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms