RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 MAGED2Q9UNF1 606 aaPredicted RBP18.37■□□□□ 0.53
NPAS3-202ENST00000356141 NPR3P17342 541 aa18.36■□□□□ 0.53
NPAS3-202ENST00000356141 RBL1P28749 1068 aa18.36■□□□□ 0.53
NPAS3-202ENST00000356141 OR1G1P47890 313 aa18.36■□□□□ 0.53
NPAS3-202ENST00000356141 DRG2P55039 364 aaKnown RBP18.36■□□□□ 0.53
NPAS3-202ENST00000356141 MSS51Q4VC12 460 aa18.36■□□□□ 0.53
NPAS3-202ENST00000356141 LRRC38Q5VT99 294 aa18.36■□□□□ 0.53
NPAS3-202ENST00000356141 TAX1BP1Q86VP1 789 aa18.36■□□□□ 0.53
NPAS3-202ENST00000356141 CRYBG2Q8N1P7 616 aa18.36■□□□□ 0.53
NPAS3-202ENST00000356141 CCDC110Q8TBZ0 833 aa18.36■□□□□ 0.53
NPAS3-202ENST00000356141 SMOQ99835 787 aa18.36■□□□□ 0.53
NPAS3-202ENST00000356141 UPF3AQ9H1J1 476 aaKnown RBP18.36■□□□□ 0.53
NPAS3-202ENST00000356141 WHRNQ9P202 907 aa18.36■□□□□ 0.53
NPAS3-202ENST00000356141 MYO18AQ92614 2054 aaKnown RBP18.36■□□□□ 0.53
NPAS3-202ENST00000356141 MCF2LO15068 1137 aa18.36■□□□□ 0.53
NPAS3-202ENST00000356141 PDIA2Q13087 525 aaKnown RBP18.36■□□□□ 0.53
NPAS3-202ENST00000356141 EFTUD2Q15029 972 aaKnown RBP eCLIP18.36■□□□□ 0.53
NPAS3-202ENST00000356141 UPP1Q16831 310 aa18.36■□□□□ 0.53
NPAS3-202ENST00000356141 RHBDF2Q6PJF5 856 aa18.36■□□□□ 0.53
NPAS3-202ENST00000356141 LRRTM3Q86VH5 581 aa18.36■□□□□ 0.53
NPAS3-202ENST00000356141 CMASQ8NFW8 434 aaPredicted RBP18.36■□□□□ 0.53
NPAS3-202ENST00000356141 BCAS4Q8TDM0 211 aa18.36■□□□□ 0.53
NPAS3-202ENST00000356141 SEPT10Q9P0V9 454 aa18.36■□□□□ 0.53
NPAS3-202ENST00000356141 AP4E1Q9UPM8 1137 aa18.36■□□□□ 0.53
NPAS3-202ENST00000356141 TRIM17Q9Y577 477 aa18.36■□□□□ 0.53
NPAS3-202ENST00000356141 PTCH2Q9Y6C5 1203 aa18.36■□□□□ 0.53
NPAS3-202ENST00000356141 RASGRF2O14827 1237 aa18.36■□□□□ 0.53
NPAS3-202ENST00000356141 SOAT2O75908 522 aa18.36■□□□□ 0.53
NPAS3-202ENST00000356141 TOMM70O94826 608 aa18.36■□□□□ 0.53
NPAS3-202ENST00000356141 CSPG5O95196 566 aa18.36■□□□□ 0.53
NPAS3-202ENST00000356141 FAM200BP0CF97 657 aa18.36■□□□□ 0.53
NPAS3-202ENST00000356141 RARGP13631 454 aa18.36■□□□□ 0.53
NPAS3-202ENST00000356141 RNASELQ05823 741 aaKnown RBP18.36■□□□□ 0.53
NPAS3-202ENST00000356141 BBS9Q3SYG4 887 aa18.36■□□□□ 0.53
NPAS3-202ENST00000356141 CYP4X1Q8N118 509 aa18.36■□□□□ 0.53
NPAS3-202ENST00000356141 ANKRD42Q8N9B4 389 aa18.36■□□□□ 0.53
NPAS3-202ENST00000356141 FNIP1Q8TF40 1166 aa18.36■□□□□ 0.53
NPAS3-202ENST00000356141 MYLPFQ96A32 169 aa18.36■□□□□ 0.53
NPAS3-202ENST00000356141 SCLYQ96I15 445 aa18.36■□□□□ 0.53
NPAS3-202ENST00000356141 DUSP16Q9BY84 665 aa18.36■□□□□ 0.53
NPAS3-202ENST00000356141 A0A1W2PQ45 241 aaPredicted RBP18.35■□□□□ 0.53
NPAS3-202ENST00000356141 A0A1W2PQY0 241 aa18.35■□□□□ 0.53
NPAS3-202ENST00000356141 KPNA6O60684 536 aa18.35■□□□□ 0.53
NPAS3-202ENST00000356141 PQBP1O60828 265 aaKnown RBP18.35■□□□□ 0.53
NPAS3-202ENST00000356141 DDHD2O94830 711 aa18.35■□□□□ 0.53
NPAS3-202ENST00000356141 NCAM1P13591 858 aa18.35■□□□□ 0.53
NPAS3-202ENST00000356141 ACTN2P35609 894 aa18.35■□□□□ 0.53
NPAS3-202ENST00000356141 CCT5P48643 541 aa18.35■□□□□ 0.53
NPAS3-202ENST00000356141 MTFR1Q15390 333 aa18.35■□□□□ 0.53
NPAS3-202ENST00000356141 ANKRD20A8PQ5CZ79 823 aa18.35■□□□□ 0.53
NPAS3-202ENST00000356141 FNBP1LQ5T0N5 605 aa18.35■□□□□ 0.53
NPAS3-202ENST00000356141 BBS12Q6ZW61 710 aa18.35■□□□□ 0.53
NPAS3-202ENST00000356141 POLNQ7Z5Q5 900 aa18.35■□□□□ 0.53
NPAS3-202ENST00000356141 FAM35AQ86V20 835 aa18.35■□□□□ 0.53
NPAS3-202ENST00000356141 PQLC3Q8N755 202 aa18.35■□□□□ 0.53
NPAS3-202ENST00000356141 OR10T2Q8NGX3 314 aa18.35■□□□□ 0.53
NPAS3-202ENST00000356141 SLC35B2Q8TB61 432 aa18.35■□□□□ 0.53
NPAS3-202ENST00000356141 KCTD15Q96SI1 283 aaPredicted RBP18.35■□□□□ 0.53
NPAS3-202ENST00000356141 TET1Q8NFU7 2136 aa18.35■□□□□ 0.53
NPAS3-202ENST00000356141 CYP2F1P24903 491 aa18.35■□□□□ 0.53
NPAS3-202ENST00000356141 PGFP49763 221 aa18.35■□□□□ 0.53
NPAS3-202ENST00000356141 PCSK9Q8NBP7 692 aaKnown RBP18.35■□□□□ 0.53
NPAS3-202ENST00000356141 ZMIZ2Q8NF64 920 aa18.35■□□□□ 0.53
NPAS3-202ENST00000356141 ANLNQ9NQW6 1124 aa18.35■□□□□ 0.53
NPAS3-202ENST00000356141 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.35■□□□□ 0.53
NPAS3-202ENST00000356141 DNALI1O14645 258 aaPredicted RBP18.34■□□□□ 0.53
NPAS3-202ENST00000356141 TMEM63AO94886 807 aa18.34■□□□□ 0.53
NPAS3-202ENST00000356141 SSTR1P30872 391 aa18.34■□□□□ 0.53
NPAS3-202ENST00000356141 CCL23P55773 120 aa18.34■□□□□ 0.53
NPAS3-202ENST00000356141 SLC10A2Q12908 348 aaPredicted RBP18.34■□□□□ 0.53
NPAS3-202ENST00000356141 ARHGAP17Q68EM7 881 aa18.34■□□□□ 0.53
NPAS3-202ENST00000356141 SCN4BQ8IWT1 228 aa18.34■□□□□ 0.53
NPAS3-202ENST00000356141 HACE1Q8IYU2 909 aa18.34■□□□□ 0.53
NPAS3-202ENST00000356141 PLD5Q8N7P1 536 aa18.34■□□□□ 0.53
NPAS3-202ENST00000356141 DEPDC1BQ8WUY9 529 aa18.34■□□□□ 0.53
NPAS3-202ENST00000356141 RNF157Q96PX1 679 aa18.34■□□□□ 0.53
NPAS3-202ENST00000356141 TPX2Q9ULW0 747 aaKnown RBP18.34■□□□□ 0.53
NPAS3-202ENST00000356141 BPTFQ12830 3046 aa18.34■□□□□ 0.53
NPAS3-202ENST00000356141 E7EVH7 732 aa18.34■□□□□ 0.53
NPAS3-202ENST00000356141 FAM72CH0Y354 149 aa18.34■□□□□ 0.53
NPAS3-202ENST00000356141 UPP2O95045 317 aa18.34■□□□□ 0.53
NPAS3-202ENST00000356141 MAGEA4P43358 317 aa18.34■□□□□ 0.53
NPAS3-202ENST00000356141 GPR15P49685 360 aa18.34■□□□□ 0.53
NPAS3-202ENST00000356141 SLC8A3P57103 927 aa18.34■□□□□ 0.53
NPAS3-202ENST00000356141 ROR1Q01973 937 aa18.34■□□□□ 0.53
NPAS3-202ENST00000356141 PCBP1Q15365 356 aaKnown RBP eCLIP18.34■□□□□ 0.53
NPAS3-202ENST00000356141 FAM72AQ5TYM5 149 aa18.34■□□□□ 0.53
NPAS3-202ENST00000356141 BSPRYQ5W0U4 402 aa18.34■□□□□ 0.53
NPAS3-202ENST00000356141 FAM72DQ6L9T8 149 aa18.34■□□□□ 0.53
NPAS3-202ENST00000356141 TMCO2Q7Z6W1 182 aaPredicted RBP18.34■□□□□ 0.53
NPAS3-202ENST00000356141 FAM72BQ86X60 149 aa18.34■□□□□ 0.53
NPAS3-202ENST00000356141 RUNDC3BQ96NL0 473 aa18.34■□□□□ 0.53
NPAS3-202ENST00000356141 RTP3Q9BQQ7 232 aa18.34■□□□□ 0.53
NPAS3-202ENST00000356141 PIGVQ9NUD9 493 aa18.34■□□□□ 0.53
NPAS3-202ENST00000356141 A0A0U1RQF3 1178 aa18.33■□□□□ 0.53
NPAS3-202ENST00000356141 WARSP23381 471 aaKnown RBP18.33■□□□□ 0.53
NPAS3-202ENST00000356141 LRPAP1P30533 357 aa18.33■□□□□ 0.53
NPAS3-202ENST00000356141 SLMAPQ14BN4 828 aa18.33■□□□□ 0.53
NPAS3-202ENST00000356141 STILQ15468 1287 aa18.33■□□□□ 0.53
NPAS3-202ENST00000356141 HIBCHQ6NVY1 386 aaPredicted RBP18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms